Oncorhynchus gorbuscha (pink salmon): 124039995
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Entry
124039995 CDS
T07892
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124039995 (vps35l)
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Others
Retriever complex
124039995 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
124039995
NCBI-ProteinID:
XP_046212628
LinkDB
All DBs
Position
LG07:52120120..52135341
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AA seq
977 aa
AA seq
DB search
MAAVQWHSRARRYDSELQSCGLEVAPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASASESPPTLSQSSSTGDLGRGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSEKGKAPSLASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWSMCSDPRPLPVIIYSDPSPDSFTADEVNDTAKETCLNWFFKIAS
IRELIPRLYVEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEV
APHLKDSLNKNFFDLLGTFRQIHGDSVQNQLVLQRVEIPIYLTLYSPAIHWILQCVSYRA
PEALLTEMMERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFG
SLGRSLACADPPEGERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVL
SDIIKHMTPDRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVGVC
LSIMDVFIKHQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSF
GRDFEQQLSFCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAA
YSFITIPSLTSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLR
SSEGFLLDFINNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVHVYISALP
LLAAMSQESYLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESVHR
QGSLAFSLFGCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPD
MAHLSDMLHRLTLQSRT
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgattctgaactgcagagctgt
ggcctggaggttgccccagtggagtttagtgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacctcctcctcctcctcctct
tccagctctgtggcaccagatcccctgagctccatgctggatggaacggaccccctgtcc
atgtttgctgcagcctctgccagcgagtcccctccaaccctctcacagagcagctccact
ggggacttgggtagaggaaagaggagggagaaggaggatgaggttggagtggactttgaa
ccgtggtcatccaaaagaggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagagaaaggcaaggctcccagtcttgcctcctctgctgta
tcggagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcagcgg
gagctgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctcaaccagtct
ctaaaagaggcctgggcctccgaccagaaggtcaaggccctcaagatcgtcatccagtgc
tccaagctgctgtcagacacagctgtgattcagttctacccaagcaagtttgtcctcatc
acagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccctaccagttattatttattcagatccctctccagactcctttacagct
gatgaagtgaatgacacggccaaggagacctgcctcaactggttcttcaaaattgcctcc
atcagagagctcatcccacgactatatgtcgaggtagctctcctgaagtgtaaccgtttc
ttgaccaagtgtgggatccaggagactgtgcctcgcctcacagctatgatccgggggata
ggggaccccctggtggccgtgtatgcccgggcctacctctgtcggattgggatggaggtg
gctcctcacctgaaggacagcctgaacaagaacttctttgacctgctggggacgttccgt
cagatccacggcgacagtgtccagaaccagctggtcctgcagagggtggagatccccatc
tacctgaccctctactcccccgccatccactggatcctgcagtgtgtctcctacagagca
ccagaggccctgctaactgagatgatggagagatgcaaaaagcttgggaataatgccctg
ctgctgaactcggtgatgtgggcgttcagggcggagtttatcgcgacgagagccaccgac
ttcatcggcatgatcaaggactgtgatgaggcaggattccctaagcacctgttgtttggc
tctctgggccgcagcctggcctgtgctgaccctcctgagggggaaaggctgcccatcctc
aatgaggcctggaaggtcatcaccaaagtgcgaagtccccaggattacatcaactgtgct
gagatctgggtggagttcacctgtcgtcacttcactaaacgtgaggtcaacactgtgctc
tctgacatcatcaagcacatgaccccagaccgggcctttgaggatgcttatcctcagctt
cagtccgtgatacggaagatcctcacctactttcatgacttctctgtcctcttctccatg
gagcgtttccttcccttcatggacatgttccagaaggacagcgtcagggtgggggtgtgt
ctctccatcatggacgtcttcatcaaacaccagcaggagcccactagagatcctgtcatc
ctcaacgctctactccatgtctgcaagaccatgcacgactctgtcaatgctctgacgctg
gaggacgagaagagatctctggccttgttgatcaatggcttcatacgcatggtgtcgttt
ggccgtgactttgagcagcagctgagtttctgtgtggaggccagggccaccttctgtaac
ctggagccagtgttggtgcagctcatccacactgtgaaccagctggccatggagacgagg
cgtgtgatgagggggagccactcccgcaagactgctgcttttgtcagggcatgtgctgca
tacagcttcatcaccattccctccctcaccagcatcttcagccgcctcaacctctacctg
ctgtctgggcaggtggccctggccaaccagtgtctttcccaggcggatgcattcctgaag
gcagcggtcagtgtgttgccagaggtgccacgcagtatcagtatcgagggcaaactgcgc
tcttctgagggcttcctgcttgatttcatcaacaacttcctgtcagcactactagttgtg
ccggaccacccagaggcaggggtgttgttccttgtgcgtgggctgctcaacatggtgcag
gactacacctgggaggacaacagtgacgccaaggtccatgtctacatcagcgccctgcca
ctactggctgccatgagtcaggagagctacctctactccatccccaaagtggactcgaat
gaaacactttatggaggagatcccaagtttttggcagagatcaacaagttatgtgaaact
ctgattggacaagtgctggaccacctcaagaccttgggtagagatgagagtgtccataga
cagggtagtctggccttctctctgtttggctgcctcctagctcacggggacctgcgcaac
aacaaactcaaccagctggctgtcaacctgtggaatctgagccacaagcagggttactgc
aacacacgcacctccgtgcggacattagagtttattaagcaccaggcccagcagccagac
atggctcacctttcagacatgctccaccgcctcaccttgcagtccaggacctga
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