Oncorhynchus gorbuscha (pink salmon): 124040058
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Entry
124040058 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24C-like
KO
K14007
protein transport protein SEC24
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124040058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124040058
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124040058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
124040058
NCBI-ProteinID:
XP_046212787
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All DBs
Position
LG07:complement(55332127..55364804)
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AA seq
1146 aa
AA seq
DB search
MNVNQQTPMASPYGPPQPGYGQPSYAPLGGGYPGPYGPYNGPATAYQPGAPPQGPARGPL
TSAPRPVSTPQAYSQYPQGDSQNGPPPMDHSMAQPAHRSPVSQPYSQGAMNLSGPHPSYS
QQYGAPPPMQQVTNQMSGMQIGSGPPTSVGPGYGKILSPAHHPSSQPPISAAYSSAAPPS
YTQAPPPLSAAPSQPPPPSEPAASQPYYGGPPPPQQQPFPSAHPPPAQQPFPNSAPPPVS
QASYSGPPPLTQHSFPPSSQSGPFPPISISPSQYPGPQPQSQPGPPPFHSGPSPRGPIPP
PSMSQQQANHLPPGPMHQQQPPQPGMQGGYPTQQNGAFGQPRGPQPGYAGPQYSGQQNYG
AGPAPAPVPPAQKRLDPDSIPSPIQVIEDDRVNKSSEPFTTGVKGQAPPLVTTNFQVKDQ
GNASPRFIRCTAYNMPCTADMAKQSQVPLAAVIKPLAMLPPDETPPYIVDHGDGGPIRCN
RCKAYMCPYMQFIEGGRRFQCGFCSCVTEVPPHYFQHLDHTGKRVDCYDRPELSQGSYEF
VATVDYCKNNKLPQPPSFIFFIDVSYNAVKSGMVNIVCQELKTLLDYLPRENPEADSVVR
VGFVTYNKVLHFYNVKSSLAQPQMMVVSDVSDMFLPLLDGFLVGVNDSRMVIESLLDQIP
EMFADTRETETVFGPVIQAGLEALKAADCAGKLFVFHSTLPIAEAPGKLKNREDKKLVGT
DKEKSLFQPQSGFYSNLAKECVAQGCCVDLFLFPNQYVDVATLGVVPVSTGGSVYKYTYF
QAETDRERFLNDLRRDVQKPMGFDAVMRVRTSTGIRATDFFGSFFMSNTTDVELAGLDCD
KTVTVEFRHDDKLSEDTGALMQCAVLYTSCSGQRRLRVHNMAVNCCSQLADLYRNCETDT
IINFFSKYAYRSILNTPTKTVRDTMVNQCAQILACYRKNCASPSSAGQLILPECMKLLPV
YLNCVLKSDVLQPGADISLDDRAYLRQLLSCMDVSESHIFFYPRLLPLVKLDGGSLPMAV
RNSEERLSKGGVYLLETGLHLFLWVGANAQQELLSNIFGTPTFSQIDPNMTSLPELDNPF
SQRLREIIDSFRSQRSRYMKLMVVKQEDKAELIFKHFLCEDKSTSGGASYVDFLCHMHKE
IRQLLS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaaccagcagactcccatggcgtctccatacggcccgccccagcctggctat
ggccagcccagctacgctcccctgggagggggctaccctggcccctacggaccctacaac
gggcccgctacagcctaccagcctggggctccaccacaaggacctgccagaggccccctt
acctctgccccccgtccagtctccaccccccaggcgtactcccagtatccccagggagac
tctcagaacggacccccacctatggatcactccatggcccagccagctcacaggtcgcca
gtgtctcagccgtatagccaaggtgctatgaacttgtctgggccacacccctcctactcc
cagcagtacggtgctccgccccccatgcaacaggttaccaatcagatgtcagggatgcag
atcgggtccggtccccccacctctgttgggccgggatatggtaagattctttctccagct
caccatcccagctcccagcctccaatcagtgctgcatactcctctgcagccccaccctcc
tatacgcaagctcctcccccattgtctgctgccccctcccagcctccccctcccagtgaa
cctgcagcctcccagccttactatggtggcccccctcccccccaacaacaacccttcccc
tctgcccaccccccccctgctcagcaacccttccccaactccgcccctcctccagtctcc
caggcctcctactctggtccccctcctctcacccagcactctttccctccctcctcccaa
tctggccccttcccacctatctctatatccccttcccagtacccaggtccacagccccag
tcccaacccggaccccctcccttccactctgggccctctcctcgaggccccattccaccc
ccctccatgtcccagcagcaggccaatcaccttccccccggccccatgcaccaacagcag
cctcctcagcctggcatgcagggaggatacccaacccagcagaatggtgcgtttgggcag
cctagagggccacagcccggctatgcaggcccgcaatattccgggcaacagaactacgga
gcaggccctgcccctgcacccgttccccctgcacagaagagactggaccctgattccatc
cccagcccgattcaggtgattgaggatgaccgggtcaacaagagcagtgagccgttcacc
actggggtcaaaggtcaggctccacccctggtcaccaccaacttccaggtgaaagaccag
ggcaatgccagcccgcggttcatccgctgtacagcctacaacatgccctgcaccgccgac
atggccaaacagtcccaggtccccttggccgctgtaatcaaacccctggctatgctgccc
cccgacgagacccctccgtacattgtggaccatggggacggcggccctatccgctgtaac
cgctgtaaggcctacatgtgtccctacatgcagttcatcgagggcggacgccgcttccag
tgtggcttctgcagctgcgtcacagaggttcctccccactacttccagcatctggaccac
acagggaagagggtggactgctacgatcggccagagctctctcagggcagctacgagttt
gtggccactgtcgactactgtaagaacaataagctcccccagcccccatcattcatcttc
ttcatcgatgtgtcttacaacgccgtgaagagcggcatggttaacatcgtctgtcaggag
ctcaagactctactggactacctgcccagggagaatccagaggcagactcggtggtgcgt
gtgggttttgtgacctacaacaaggtgttgcacttctacaacgtcaagtccagcctggcc
cagccccagatgatggtggtcagtgacgtcagtgacatgttcctccctctgctcgacggc
ttcctggtcggcgtcaacgatagccggatggtcatcgagagtttgctagaccagattccg
gagatgtttgcagacaccagggagactgagacggtgtttggaccagtcattcaggcagga
ctggaggcactgaaggctgcagactgtgccgggaagctgtttgtgttccactccactctg
cccatcgctgaggctcctgggaaactgaagaatagagaggacaagaaactagtgggaaca
gacaaggagaagtctctgttccagccccagtctggtttctatagtaacctcgctaaggag
tgtgtagcacagggctgctgtgtagacctcttcctgtttcccaaccagtacgtcgacgtg
gcaacgcttggcgtggtgcccgtctccaccgggggttccgtctacaaatacacctacttc
caggccgagacggaccgtgagcggttcctgaatgatctgcggcgagacgttcagaagccg
atgggcttcgatgctgtcatgagggtccgaaccagcacaggtatcagagcgacagatttc
tttggttcgttcttcatgagcaacacgacagacgtggagctggcaggcctggactgtgac
aagactgtcaccgtggaattccgccacgacgacaagctcagcgaggacaccggcgcgctc
atgcagtgtgcggtgttgtacaccagctgtagtggtcagcggcgtctgcgggtccacaac
atggcggtcaactgctgctcccagctcgccgacctctaccggaactgtgagacggacaca
atcatcaacttcttctccaagtacgcgtaccgtagcatattgaacacccccaccaagaca
gtgagagacaccatggtgaaccagtgtgcccagattctggcctgctaccgcaagaactgt
gccagcccctcgtctgccggacagctgatcctaccagagtgtatgaagctgctgccggtc
tatctgaactgtgtgttgaagagtgacgtgctgcagccgggagctgacatctcattggac
gacagagcctacctgagacagctgctcagctgtatggacgtatcagagagccacatcttc
ttctatccccgcctactgcccctggtgaagttggatggagggtcgttgccaatggcagtg
cgtaactcagaggagcgcctgtcgaagggcggagtctacctcctggagacagggctccac
ctcttcctgtgggtgggagccaatgctcagcaggagctgcttagcaacatctttggaacg
cccaccttcagccagatagaccccaacatgacgagtctgccggagctggacaacccgttc
tcccagagactccgagagatcatcgactccttcaggtcacaacggtcacgatacatgaag
ttgatggtggtgaagcaggaggacaaggcggagctaatctttaagcacttcctgtgtgag
gacaagagcaccagcggaggagcttcctatgtcgacttcctgtgtcacatgcacaaggag
atccgccagctactcagctag
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