Oncorhynchus gorbuscha (pink salmon): 124040086
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Entry
124040086 CDS
T07892
Name
(RefSeq) LLGL scribble cell polarity complex component 2-like isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124040086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124040086
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124040086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
PLN_propep
Motif
Other DBs
NCBI-GeneID:
124040086
NCBI-ProteinID:
XP_046212846
LinkDB
All DBs
Position
LG07:complement(57427413..57452496)
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AA seq
1011 aa
AA seq
DB search
MKRFRRHGQESQRERIKQELYGFNKTVEHGFPHQPSALGFSPSLQLLAIGTRSGAIKLYG
GPGVEFMGLHDENAAVTQVHFLPHQVELVTLLDDNSLHMWTLRAHHGVSELLEIGRFTLT
GPPGAPPSVTRVTAVLAHSSGDLLLLGTEGGHVFIVKVPGFRELEERNISLEKVTNGVPE
EYGGRRSLEHVESLQENPVNPRQVLIGYGRGLMVIWDLDGQSAVKHIPATQQLESVWWTE
DGDHVLSSHSDGSYCRWKVAGDDPQSEQEKSEVPYGHFPCKAISKIIQLPTEQGPPFLFL
SGGMPRASYGDRHCISVIHSKTHVALDFTSRIIDFFVIRDGPDHTGEPSALVVLVEEELV
VIDLQTEGWPVIQTPYLVPLHCSAITCSHHVSAIPLKLWERVQSAGALQNTHYSKKPWPM
TGGQNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTAGVFLTDSDPNDNLNQG
TEGEWPPFRKVGCFDPYSDDPRLGIQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQTV
EATVADLLQGQEGFRWKGHTRLEVREEPVTFPPGFQPFALVQCQPPAVITALTLHSEWKL
VTFGTSHGFGLYDYHQKNNVLVRCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRV
SLRKHHVNNAAKLQQANARLEAELAEMELAPVQRKIEPRSPDDSFTGLVRTLYFADTFLS
DSSHNTPSLWAGTNGGSVFAYQLRLPPVERRGEDPVTAHPAKEIQLMHRAPVVGILVLDG
HGSPLPEPLEVAHDLARSPDMQGSHSLLVISEEQFKVFTLPKVSAKMKLKLTAIDGSRVR
RVGVAWFGSTRTDDYGESGLTVLTNQGDLHVVSLPGVKLQVQYPCIRREDVSGIASCVFT
KHGQGFYLISPSEFERFSLSARCVVEPRSLVEVSSQTPSTTLPRALPDGASVERRNSTRD
GVESSARRVMEHALLNDETVLQEIQKSLEVDQTTFLENGTSALAGGKVLSN
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtttaggagacatggccaggagtcccaaagagagcggatcaaacaggagctc
tacgggttcaataagacagtggagcatggttttcctcaccagcccagtgccctgggcttc
agccccagtctacagctcctggccatcggcacacgttccggagccatcaaactttacggt
ggcccaggtgtggagttcatgggtctacacgatgagaacgctgccgtcacacaggtccac
ttcctgccacaccaggtggagctggtgactctgttggatgacaacagtctccacatgtgg
accctcagagctcaccatggtgtctctgagctgctggagataggacgcttcacactcact
ggacccccgggtgctccccccagtgtaactcgtgtaacagcggtgctagcccactcttct
ggggacctgctgttgctaggaacagagggaggacacgtgttcatagtgaaggtaccaggc
ttcagagaactagaggagaggaacatcagcctggagaaagtcaccaacggtgtaccagag
gagtacggaggtcgtaggagcctggagcatgtcgagtccttacaggagaatcccgtcaac
ccacgccaggttctgattggatacggacgaggcctcatggtcatctgggacctagacggc
caatcagccgtcaaacacatccccgctacacagcaactggagagcgtgtggtggacggag
gacggtgaccatgttctcagttcccatagcgacggcagctactgccgctggaaggtggct
ggggatgacccacagagcgagcaggagaagtccgaagtaccatacggccacttcccctgt
aaggccatctctaaaatcatccagctgccgacagaacaggggcctccgttcctgttcctc
agtggcggcatgccccgggccagctacggtgacagacactgtatcagtgtgatccacagt
aaaacacacgtggctctggacttcacctccagaatcatcgacttcttcgtcatcagagac
ggaccagaccatacaggcgaacccagtgcattggtggtcttagtagaagaggagttggta
gtgatagatctccagactgaagggtggccggtcatccagactccgtacctggtgcctctc
cactgctcggccatcacctgctcccaccatgtctctgctatacccctgaagctgtgggag
agggtccagtctgccggagcattgcagaacacgcactactctaagaagccgtggcctatg
accggaggacagaacctggccccagacccccctcagagagacttactgctcacagggcac
gaggacggtacggtgcgtttctgggacgcgtcgggggtgtgtctgtaccccatgtacaag
ctgagcacggcaggggtgttcctcactgactcggaccccaatgacaacctgaaccagggc
acagagggagagtggccacctttcagaaaggtgggttgttttgacccgtacagtgacgac
cctcgtctcggcattcagaagatccacctgtgtaaatacagcggctacctgactgtagct
ggcactgctggacagatcctggtgttagagctgaatgatgaggcagcagaacagactgtg
gaggccaccgtagcagacctgctacagggacaggagggcttccgctggaagggccacaca
cgtctggaggtgagggaggagccggtgacgttccccccagggttccagccctttgccctg
gtccagtgccagcctccggccgtgatcactgccctcaccctgcactctgagtggaaacta
gtaacattcgggaccagccacggcttcggactctacgactaccatcagaaaaacaacgtt
cttgtcaggtgtactctgaaccccagtgaccagctggctatggaaggtcctctgtccaga
gtgaagagcattaagaagtctctccgccagtccttcagaaggatcaggcgcagcagagtg
tccctacgcaaacaccatgtcaacaacgcagctaagttgcagcaggccaatgctcgtcta
gaggcggagctagctgagatggagttggcgcccgtccagagaaagatagagcctcgatcc
cctgatgactccttcaccggcctcgtgcgcacgctatacttcgctgataccttcctttca
gacagctcccacaacacaccctctctgtgggcagggaccaatgggggatcagtattcgcc
taccagctccgcctaccgcctgtggaacgcagaggagaggaccctgtcacagcacaccct
gctaaggagatccagttgatgcaccgtgctccagtagtgggcatcttggtgttggacggc
catggttcccctctgcctgagcccctggaggtggctcacgacctggcccgctcacctgac
atgcagggttcacacagcctactggtcatatcagaggaacagttcaaggtgttcaccctg
cctaaggtgagcgccaaaatgaagttgaagttgacggccattgacggctcacgcgtgcgc
cgggtgggcgtggcctggttcggcagcacccgcacggacgactacggcgagagcggcctc
accgtcctgaccaatcagggagacctccacgtggtgtcgttgccgggggtgaaattgcag
gtccagtacccctgtatacgtagggaggacgtcagcggcattgcatcctgcgtcttcacc
aagcatggacagggtttctacctgatctctccgtcagagtttgagcgtttctctctgtct
gctcgctgtgtggtagagccccggtctctagtggaggtatcctcccagacacccagcacc
actctgccacgggcgctgccggacggggcctctgtggaacgcagaaattccacgagggat
ggcgtggagagctctgctagacgtgtgatggagcatgctttgctgaatgacgagactgtg
cttcaggagatccagaagtctctagaagtagatcagacgacgttcctggagaatgggacg
agtgctctcgctggagggaaggtgctgagcaattga
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