Oncorhynchus gorbuscha (pink salmon): 124040112
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Entry
124040112 CDS
T07892
Symbol
wdr45b
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3 isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124040112 (wdr45b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124040112 (wdr45b)
Membrane trafficking [BR:
ogo04131
]
Autophagy
Other autophagy associated proteins
Others
124040112 (wdr45b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_Vps41
BCAS3_WD40
ANAPC4_WD40
WD40
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_2nd
Beta-prop_HPS5
WDR55
EIF3I
Beta-prop_EML
Beta-prop_IFT140_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_DCAF12
DUF1513
Motif
Other DBs
NCBI-GeneID:
124040112
NCBI-ProteinID:
XP_046212911
LinkDB
All DBs
Position
LG07:58720024..58731063
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AA seq
384 aa
AA seq
DB search
MLIFFLLVRMVTCVVHVTRVGGYLDTFQKHLVNHKKLPCPGESCAVIKTSRQGCFACGME
NGFRVYNTDPLKEKEKQGTQHCDSESQEFMEGGVGHVEMLFRCNYLALVGGGKKPKYPPN
KVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYN
PKGLCVLCPNSNNSLLAFPGTHSGHVQIVDLANTEKPPVDIPAHEGALCCIALNLQGTRI
ATASEKGTLIRIFDTMAGHLIQELRRGSQAANIYCINFNQDASLICVSSDHGTVHIFAAE
DPKRNKQSSLASASFLPKYFSSKWSFSKFQVPSNSPCVCSFGTEPNSVIAICADGSYYKF
LFNQKGECSRDVYAQFLEMTDEKI
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttctttttacttgtaaggatggtaacgtgtgttgtacacgtaactagagtc
gggggatatctagacacttttcaaaagcatctagttaaccacaaaaagttaccttgtcca
ggagagagttgcgcagttatcaaaacgtcacgccagggatgctttgcttgcggaatggag
aatgggtttagagtgtacaacacagatccactcaaagagaaagaaaaacaagggacacag
cattgtgacagcgagagccaagagttcatggagggcggggtcgggcatgtggagatgctg
ttcaggtgtaactacctagcgctggttggaggaggaaaaaagcccaaatacccacctaac
aaagtgatgatctgggatgacctgaagaaaaagacagttatagaaattgagttctccacg
gaggtcaaagcagtgaagcttcgaagggacaggatcgtggtggtcctggattctatgatc
aaagtgttcacgttcacccacaaccctcatcagctgcatgtgtttgagacctgctataac
cccaaaggtctgtgtgtgctctgtcccaacagtaacaactctctgctggcgttcccgggg
acccactctgggcacgtgcagatcgtagaccttgccaatacagagaagcctccagtggac
atccccgcccacgagggggcgctgtgttgcatcgccctcaacctgcagggaaccaggata
gccactgcctccgagaaagggaccctgatcagaatatttgacaccatggcaggccacctg
attcaggagttgaggcgagggtcacaggctgctaacatctactgcatcaatttcaaccag
gatgcgtccctcatctgtgtgtctagtgaccacggtacagtccacatattcgctgcagag
gaccccaagaggaacaaacagtccagcctagcctcggccagtttccttcctaagtacttc
agctccaagtggagcttctccaagttccaggttccatcaaactcgccgtgtgtgtgttcc
ttcggaacagaacccaactctgtcatagccatttgtgctgatggcagctactacaagttc
ctgttcaatcagaagggggagtgttcccgagatgtctacgcacagttcctggagatgaca
gacgagaagatctga
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