Oncorhynchus gorbuscha (pink salmon): 124040257
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Entry
124040257 CDS
T07892
Name
(RefSeq) ras-related protein Rab-4A isoform X1
KO
K07879
Ras-related protein Rab-4A
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124040257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124040257
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ogo04031
]
124040257
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
124040257
GTP-binding proteins [BR:
ogo04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
124040257
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Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
ATP_bind_1
RsgA_GTPase
Gtr1_RagA
AAA_7
SLFN-g3_helicase
AAA_16
AAA_22
SRPRB
ATPase
ATPase_2
Septin
NACHT
Motif
Other DBs
NCBI-GeneID:
124040257
NCBI-ProteinID:
XP_046213213
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All DBs
Position
LG07:66944058..66949345
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AA seq
213 aa
AA seq
DB search
MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIINVVNKYVKLQ
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG
NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDP
ERMGSGIQYGDAALRQLRSPRRGQAESAQECGC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacatacgattttctgttcaaattcctagtgattggaaatgcaggaactgga
aaatcatgtcttcttcaccagtttattgagaagagattcaaagacgattcgaatcacacc
attggagtggagtttggctcaaagataatcaacgtggtaaacaaatatgttaaactccaa
atctgggacactgcgggacaagagagattcaggtctgttacacggagttactacagaggc
gctgctggagccctgcttgtatatgacatcaccagccgggaaacctacaatgccctgacc
aactggctgacagacgccaggatgctggccagccaaaatattgtcataatcctgtgtggt
aacaagaaggacttggacgcagaccgggaagtcaccttcctggaggcgtctcgctttgct
caggaaaatgagcttatgtttctggagacaagtgctctgacaggggagaatgtagaggag
gcctttgtgcagtgtgccaggaaaatcctcaacaagatagagtcaggagagttggacccg
gagaggatgggatcagggatccagtacggagacgccgcgctgcgccagctgcgctcccct
cgcaggggacaggccgagagcgctcaggaatgtggctgttag
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