Oncorhynchus gorbuscha (pink salmon): 124040259
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Entry
124040259 CDS
T07892
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124040259 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124040259 (abcb10)
Transporters [BR:
ogo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
124040259 (abcb10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
ABC_ATPase
AAA_16
AAA
AAA_29
DUF87
Zeta_toxin
AAA_25
nSTAND1
RsgA_GTPase
AAA_33
AAA_5
nSTAND_NTPase5
NB-ARC
CBU_0592
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
124040259
NCBI-ProteinID:
XP_046213218
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All DBs
Position
LG07:complement(66987047..66994400)
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AA seq
717 aa
AA seq
DB search
MGLLLLQLSKCPGVNILKREVHSRVHKLFWLECQTSRGQREVSGKRFEPVARSSLSHPRR
CNSLVPCVPLRQFTIPPHLLRNSWTATVHFANYSSSTDSKQATQQEVDSKDLQSTETKQS
PTRIPTEDVKRILQLAHPERLRLSAAVGFLMVSSAVTMSAPFFLGHVIDTIYTSSSEDFS
ASLRSLCIMLSGVFLCGGAANAARVYLMQISGQQIVRNLRVFLFSSILRQEVGFFDKTRT
GELINRLSADTALIGRSVTDNLSDGLRAVAQATAGVSMMFYVSPSLAAFVLLIVPPMAGL
AVIYGRYLRSISKRTQDSLAEATQLAEERISNMRTVRAFGKELTEVAKYTEKANYVLHLA
KQEAVLRAGFFGATGLSGNIIILSVLYKGGLLMASEHMTVGELSSFLMYAFWVGISIAGM
SSFYSELMKGFGAGARLWELLDRKPEFPLNEGIVLRPEQLKGQLEFQNVSFAYPTRKDAP
IFQDLSLSVPAGSVMAVVGPSGSGKSTLVSLLLRLYDPVAGVITIDGHDVRDLNPYWLRS
HIGTVSQEPVLFSCSIAENIAYGAPDSGTVTVQEIHQAAQIANAYEFVRGFPKGFDTVVG
EKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMDGRTVLII
AHRLSTIQNADAVAVLDQRRVVECGQHAQLLGNRQGLFRKLMEKQAFLQEGQKQALR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggactgttgctgttgcaattgtcaaaatgtccaggcgtgaatattttgaagcgcgag
gttcactcccgtgtacataaactattttggttagaatgccagacgtccaggggacaacga
gaggtgagtgggaaaaggttcgaacctgtggcacgctcttcgctttcacacccgaggaga
tgcaactctcttgtgccctgtgtaccacttagacagttcaccatacccccccatttgttg
aggaactcatggacagcaactgtacactttgccaactacagctcttcgacagactcaaaa
caagcaacacaacaagaagttgacagcaaagatctgcagtcaacggaaacaaaacaatcc
ccaactcggatacccactgaggatgtgaaaaggattttacaacttgcccaccctgagcgc
ttgcgactgtcagcggctgtgggcttcctaatggtctccagcgctgtcacaatgtcggct
cccttcttcctgggccatgtcattgacaccatctacaccagctcttcagaggacttcagt
gcctccctccgctctctgtgtatcatgctttcaggggtattcctttgtgggggcgccgct
aatgctgcccgtgtctacctcatgcaaatctcaggtcaacagattgtgagaaatctacgt
gtattcctattctcctcgattctgaggcaggaggtaggtttctttgataagacccgtacc
ggggaactcattaaccgcctatctgcagacacggcactcatcggccgctccgtcacagac
aacctttctgacgggctccgcgctgtcgcccaggcaacagctggggtcagcatgatgttt
tatgtgtcaccaagtttagcagcctttgtgctgctgattgtgcctcctatggctggccta
gctgtcatatatgggagatacctgcgctccatatccaaacgtacacaggactctctggct
gaggccacacagttggcagaagaacgcatcagcaacatgaggacagttcgggcgtttggt
aaggagctgacagaggtggccaagtatacggagaaggccaactatgttctccacctggcc
aaacaggaagccgttttgagggctggcttctttggcgcgactggactcagtggcaacatc
atcatcctgtcagtgctgtataagggagggctattgatggccagtgaacacatgactgtg
ggagagctctcttccttcctcatgtacgccttctgggtgggcattagcattgcaggtatg
agctcgttctactctgaactgatgaagggctttggcgcaggggcacggctttgggagcta
ctggacaggaagcccgagttccccctcaatgagggtattgtactgaggccggagcagctt
aagggtcaactggagttccagaatgtctcctttgcctacccaacccgcaaagacgccccc
atcttccaggacctgagtctctctgtgcctgctggctccgtcatggctgtggtagggccc
agtggatcgggcaaatccactctggtctccctgctgctcaggctctatgacccagttgca
ggtgtgatcactatcgacgggcatgatgtgagagatttgaatccttattggctgaggagt
cacattggaactgttagtcaggagcctgtactcttctcctgttccatcgctgagaacatt
gcctatggagcgcccgactctggcacggtcacagttcaggaaatccaccaggctgcacag
atcgccaacgcttatgagtttgtccgaggtttcccaaaaggctttgacactgtggtggga
gagaagggtgttcttctctcaggtggtcagaaacagagaattgctattgcaagggctctg
cttaagaaccccaagatacttctacttgatgaggctacaagtgccctggatgcagagaat
gagttcctggtccaggaggctctagagcggctcatggatggtcgcacagtgctgatcatc
gcccaccgcctctccaccatccagaacgctgacgccgtggctgtgctggaccagcggcgt
gtggtggagtgtgggcagcatgcacagctcctgggcaaccgccaaggcctcttcaggaag
ctgatggagaaacaagccttccttcaagaggggcaaaagcaagcgttgcgttga
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