Oncorhynchus gorbuscha (pink salmon): 124040274
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Entry
124040274 CDS
T07892
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124040274 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124040274 (sin3aa)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124040274 (sin3aa)
REST complex
124040274 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
124040274 (sin3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
DUF1846_C
Motif
Other DBs
NCBI-GeneID:
124040274
NCBI-ProteinID:
XP_046213251
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All DBs
Position
LG01:complement(55308111..55343513)
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AA seq
1269 aa
AA seq
DB search
MKRRLEEQEPVFASQQRRLTCSTEAFQHRVLAPAPAAYEAVGDSMQPTAGNIQYSVPQGY
QVPTVPQNSSGHVHTPSPTVHHHSPAVQPHGPPVMQCHAHPPASAQGQQQFQRLKVEDAL
SYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLP
PGYKIEVATNDLVNVTTPGQIHHITPHGISVSQIPLSGPPTPHQPQVPAPTTTSAPSPPT
QPTPTKMSKQPLQSPVLTPSSQPNPSIPAYASPQSPTLQPHTPISGTPNAPPLQNNQPVE
FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVA
RLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGGTAKKLQLNNKQRPNQNG
CQIRMLSGTVVTPPVKKKPKLLNLKDSSLVEASKHGDGTESLFFEKVRKALRSAEAYDNF
LRCLVIFNQEVISRAELVQLVLPFLGRFPELFNWFKNFLGYREMSHTERYPKERALEGIA
MEIDYASCKRLGSSYRALPKSYTQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKT
QYEEHIYRCEDERFELDVVLETNLATIRMLETVQRKLSRMSAEEQAKFRLDNTLGGSSEV
IHRKAIQRIYGDKAPDIIDGLKKNPAISVPIVLKRLKNKEEEWREAQRGFNKIWREQNEK
YYLKSLDHQGINFKQNDTKVLRSKTLLNEIESIYDERQEQASEENTAMPSGPHLTLTYKD
SQILEDAAALIIHHVKRQTGIQKEDKYKIKQIIHHLIPDMLFAQRGELSDLEEEEEEEME
LDEAVAKKHNGVAQGGSPNKSSKLLFCNTGAQKLRSCTEAYNLFYVNNNWYIFLRLHQTL
CSRLMRIYGQAERQIEEDIRERDWEREVLGLKRDKNDNPAIQLRLKEPMDIEVEDYYSAF
LEMVRNLLDGNMEPAQYEDSLREMFTIHAYTAFTMDKLIQSIARQLQHIVSDEICVQVTD
LYLAESTNGATGGPLPTQTSRASTEGCYQRKAEQIMSDENCFKLMFLKNRGHVQLTVELL
DTEEENSDEPMEAERWSDYVGRYLNSDSTSPELREHLAQKPVFLPRNLRRIRKYQRGREQ
LEKEASEGEKKSTENAENLKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHERVST
RLHKRFQAWVDFWVKEHVTRDMAAETNKWLMGEGRDGLVPCTTTRELEILHFMNINKYRV
KYGSPFKAP
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcgcttggaggaacaggaaccggtatttgcgtcccaacagcggcgcctcacc
tgcagcacggaggctttccagcaccgtgtcctggccccggcgcctgccgcatacgaggcg
gtgggcgacagcatgcagcctaccgcaggcaacattcagtattctgtcccacagggctac
caggtccccacggtgccacagaactcgagtggtcatgtgcacacccctagcccaactgta
caccaccacagcccagcggtccagccccacgggccccctgtgatgcagtgccacgctcac
ccccctgcctcagcccagggccagcagcaattccagaggctcaaggtggaagatgctttg
tcttacctggaccaagtgaaactccagtttggcaaccaacctcaagtctacaatgacttc
ctggacatcatgaaggagttcaagtctcaaagcattgacactccaggggtgataagcagg
gtatcccagctcttcaaaggccaccccgacctcattatgggattcaacaccttcctgcca
ccgggctacaagatcgaggttgcgaccaacgacctggtcaatgtaaccacgccgggtcag
atccaccacatcacccctcacggcatttctgtctcacaaatccccctgtcgggaccaccc
accccgcaccagccccaggtgccagcccccaccaccacctctgcaccatcccctcccaca
cagccaacccctaccaagatgagcaagcagccactgcaatctccagtcctcacgccaagc
agccagcccaatccgtccatccccgcctatgcctccccccaatccccaaccctgcagccc
cacacaccgataagtggcacgcccaatgcccctccgctgcagaacaaccagcctgtggag
ttcaatcatgccatcaactacgtcaacaagatcaagaaccgtttccagggtcagccagac
atctacaaagccttcctggagatcctgcacacctaccagaaggagcagcggaatgctaag
gaggcaggagggaactacaccccagccctgacagagcaggaggtctatgcccaggtggcc
cggctcttcaagaaccaggaggaccttctctctgagtttggccagttcttaccagatgcc
aacagctcggtgctgttaagcaagacgacagcagaaaaggcggagtctgtgcggaatgac
cacggtggcacagcgaagaagctgcagctcaacaacaaacaaaggcccaatcagaacggt
tgccagatccgcatgctctctgggacggttgtcacaccccctgtcaagaagaagcccaag
ttactgaatttgaaagactcgtccctggtagaagccagcaaacatggagatggcacagaa
tctctgttctttgagaaggtgcggaaggccttgcggagtgcagaggcctatgacaacttc
ctgcgttgtttggttatcttcaaccaagaggtcatctccagggctgagctggtgcaactg
gtgctgcctttcctggggagattccccgaactgttcaattggttcaagaacttcctagga
taccgggaaatgtcccacactgagcgctatcccaaggagcgtgccttggagggcattgcc
atggagatcgactatgcttcctgcaagagactgggctcgagctacagagcactgccgaag
agctacacgcagcccaagtgcaccgggagaacgccactgtgcaaagaggtcctcaatgac
acctgggtgtccttcccttcctggtctgaagactccacctttgtgagctccaaaaagacc
cagtatgaggagcacatctacagatgtgaggatgaacgcttcgagctggacgtggtgctg
gagaccaacctggccaccatccgcatgctggagaccgtacaaagaaaactgtcccgtatg
tctgccgaggagcaggctaagtttcgcctggacaacacgctgggaggctcctcggaagtc
atccatcgcaaggccatccagaggatatacggtgacaaggcccctgacatcatcgatggg
ctcaagaagaaccctgccatttctgttcccattgtgctgaagaggttaaagaacaaggag
gaggagtggcgggaagcccagaggggcttcaacaagatctggagggagcagaatgagaag
tactacttgaagtctctcgaccaccaaggtatcaacttcaaacagaacgacaccaaggtg
ctacgatccaagacactgctcaatgagattgagagcatctacgacgagcgacaggaacag
gcgtcggaggagaacaccgcgatgcccagcggcccccacctgactttgacctacaaggac
agccagatcctggaggatgctgccgccctcatcatccaccacgtcaagcggcagacgggc
atccagaaggaggataagtacaagatcaaacaaatcattcaccacttgatcccagacatg
ctgtttgcccagcgcggcgagctctcggacctggaggaagaagaggaagaggagatggag
ctggatgaggccgtggccaagaagcacaatggcgtcgcgcaaggcggaagccccaacaag
tcctccaagctcctcttctgcaacacgggtgcccagaagctgcgaagttgcaccgaggcc
tacaatctgttttacgtcaacaataactggtacatcttcctgcggctgcaccagacactg
tgctcgcggctgatgcggatctacgggcaggcggagagacaaattgaggaggacatccgg
gagcgtgactgggagagagaggtgctgggcctcaagcgagacaagaatgacaaccctgcc
atccagctgagactgaaagagcccatggatatagaggtggaggactactactctgccttc
ctggagatggtgcggaaccttctggatggcaacatggagccggctcagtacgaggactcc
ctccgggagatgttcaccatccatgcctacaccgccttcaccatggacaaactcatccag
agcatcgccaggcagctccagcacatagtgagtgacgagatctgcgtgcaggtgacagac
ctgtatttagcagagagcaccaacggggccaccggaggtccccttcccacccagacatcc
agagcttccacagagggatgctaccagcgcaaggcggaacagatcatgtccgatgagaat
tgcttcaagcttatgtttctaaagaacagaggccatgttcaactgacagtggagcttctg
gacaccgaggaggagaactccgatgaacccatggaggcagagcgctggtcagattacgtg
ggtcgctacctgaattctgactctacctctccagagttgcgggaacaccttgctcagaaa
cctgtcttccttcccaggaacctccgtcggatacggaagtaccaaaggggtagggagcag
ctagagaaggaggccagcgagggagagaaaaagtccacggagaatgccgagaaccttaaa
atggaatgtatgttcaagctcaactcctataagatggtttatgtcttcaagtctgaggac
tacatgtaccgacgcactgccttgctgcgagctcaccagtcacacgagagagtgagcact
cggttgcacaagcgcttccaggcctgggtcgacttctgggtgaaggagcatgtcactcgc
gacatggccgctgagaccaacaagtggctgatgggagaggggcgtgacggtctggtgccg
tgcaccaccacccgcgagctggagatcctccacttcatgaacatcaacaagtaccgtgtc
aaatacggctcacccttcaaagcaccataa
DBGET
integrated database retrieval system
