Oncorhynchus gorbuscha (pink salmon): 124040307 Help Entry 124040307         CDS       T07892                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism ogo  Oncorhynchus gorbuscha (pink salmon) Pathway ogo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ogo00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     124040307 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ogo03400]     124040307 (msh6) DNA repair and recombination proteins [BR:ogo03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      124040307 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II Motif Other DBs NCBI-GeneID:  124040307 NCBI-ProteinID:  XP_046213326 LinkDB All DBs Position LG07:70311327..70343654 Genome browser AA seq 1385 aa AA seqDB search MAKQSSIFNFFNKSPPPVLKAKPSPSPAEADLPSSVRQKNSSPKEEAKHASQTPTTKKTP AKPLNAKASKGGFGKLFGNKTLTIKESPAPCPFSAGALVWAKLEGHPWWPCMVVPQPVGG QQMRGRGKSQRLHVHFFDEPPTRGWVSTKYIREYQGSDSSDAKTGGVFFSGKPVIRKAME LADAAMPDSPETRLKMPVCMDPSDAEEDEEEDMELDKSTLTDEDLTEEEDETVKSKPSRR SSRATAEQGSKSKRRRIVVASDSEGSGDEFKPEQAGCSSEEDEEEVVNSMSEEDVESECE AEPDSPVKPVKRKRPVEKPSSAKPKPKTPTLPETAKRAPLSSTFTADTKSRLSAFSAPES FDSQANGSGAGGQGGATVWDHEKLDWLQEGRRKDAKRRRQSEEDYDPTTLYVPEDFLNKT TPGMRRWWQLKSETFDAVLFFKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEIGF GRFSDGLVQRGYKVARVEQTETPDMMEARCKTMLKPTKFDRVVQREVCRIITRGTQTYSV LDGAPSETHSKYLLSIKEKAEEESSGRCRTYGVSFVDTSVGYFYVGQFQDDRHCSRLRTL LSHYTPAQVLFEKGNPSAETRKIFKASLSSAMQEGLTAGSQFWDAQKTLKTLAEEDYFKE SVRKDEESESSVLPSVLKSMTSESDSLGLTPKEGYELALSALGGCMFYLKKCLVDQELLS MTNFQEYIPVDVEMEKAAGPTSFFSQTRQRMVLDGVTLANLEILQNVSGGTEGTLLERLD TCSTPFGKRLLKQWLCSPLCNPTSIGERLDALEDLMGVQAQATEVSDLLKKLPDLERLLS KIHSIGTPKGQDHPDSRAVLYEEVTYSKKKIADFLSALEGFKTMQEIVTILGPVAVDFRS RLLRQVVNLKDDCQEGLFPDLSAELKRWDTAFDHQKARATGVITPKTGFDPEFDQALSGI KACERDLQDYLDRQKKRLGCRNLTYWGMGRNRFQMEVPDSVSERNIPEEYKVKSTKKGWK RYWTREIERLFSELQSLEEKRDAALKDCMRRLFYNFDKNYRDWQTGVECMAVLDVLLSLT RYSQGGDGGPMARPQVLLPGDISQSAAFLDLRGSRHPCVTKTFFGDDFIPNDIAIGCPGG EEEGQEDKGHAPCVLVTGPNMGGKSTLMRQCGLVVVLAQLGCYVPAESLSFTPVDRVFTR LGASDRIMAGESTFFVELSETASILHHGTKHSLVLLDELGRGTATYDGTAIASAVVNELA KRICCRTLFSTHYHSLVEDYTNNPAVRLGHMACMVENEGDEDPSQETITFLYKFIAGACP KSYGFNAARLANLPEDVIQSGHRKAKEFERSTISLRVFKKLCLYAEDPTAASTQFALLLR MISNL NT seq 4158 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagcagcattttcaattttttcaataagtctccgccaccggttctgaag gcgaaaccgagtccctcgcctgcagaagccgacttgccatcctcagttcgacaaaagaac agctctccaaaagaagaagctaagcatgcatctcaaactcccaccaccaaaaagactcct gcaaaaccccttaacgcgaaagcgagcaaaggcggattcggcaaactctttgggaataag acactaacaataaaggagagtccagcaccatgtccattcagtgccggagccttggtgtgg gccaagctagaggggcacccctggtggccgtgtatggtagttccccagcctgttggcggg cagcagatgaggggaaggggtaaaagccagcgcctgcatgtccacttcttcgatgagcca ccgaccaggggctgggtcagcaccaaatatatccgcgagtatcaaggctcggacagcagt gatgctaagacaggaggggtgttcttcagtggtaagcctgtgatccgcaaggccatggag ctggctgatgctgctatgccagacagcccagagactagactgaagatgcctgtctgtatg gacccatctgatgctgaggaagacgaggaggaggatatggagcttgataagtcaacattg accgacgaagatttgactgaagaggaagatgagacagtgaagtctaagcctagtcgccgt tcctcccgtgccacagcagaacaaggcagcaagtccaagcgtcgccgcatcgtggttgcc tccgacagtgaaggctcgggtgacgaattcaaaccagaacaggccggatgcagcagtgag gaagatgaggaagaggtagtgaacagtatgtcggaggaagatgtagaaagtgaatgtgag gctgaacccgacagcccagttaaaccggtgaaacgcaaacgacccgtagagaagccatcc agtgccaaaccaaaacccaagactcccactcttccagaaaccgccaagagagccccctta tctagcaccttcacagccgacaccaagtctcgactctcagccttttcggccccggagagc ttcgacagccaggcgaatggctcaggtgccggcgggcaaggtggggctacggtatgggac catgagaagcttgattggctacaggaaggccggaggaaagacgccaagagacggagacag tcagaggaagactacgatcccacgactctgtatgtcccagaagacttcttgaacaaaacg accccaggcatgcggcgctggtggcagctcaagtcagagacgttcgatgccgtactcttc ttcaaggtgggtaagttctatgagctgtaccacatggatgctgtgattggtgtcaacgag ctgggtctgaccttcatgaagggggcctgggcccactctggcttccccgagataggcttt ggacgcttctcagatggactggtgcagaggggatacaaggtggcacgtgtggagcagacg gagactccagacatgatggaggctcgctgtaagaccatgctgaagcccaccaagtttgac cgggtggtacagcgtgaggtatgccgaatcatcacacggggaacgcagacctacagcgtg ttggacggagccccttctgagacacacagcaaatacctcctcagcatcaaggagaaggca gaggaggaaagttcagggcgctgcaggacttatggggtcagcttcgtggacacatctgta gggtacttctatgtgggccaattccaggacgaccgacactgctcccggctccgcaccctg ttgtctcactacacccctgcacaggtgctctttgagaaggggaacccttcagccgaaacc cgtaaaatcttcaaggcttctttgtcctcggctatgcaggaggggctgactgcaggctcc cagttctgggatgcacagaagaccctgaagaccctagctgaagaagactactttaaagag agtgtgaggaaggatgaggagtctgagagcagtgttctcccctctgtcctcaaatccatg acgtctgagagcgactcgttgggtctgacccctaaggaggggtatgagttggctctgtcg gccctgggaggctgtatgttctacttaaaaaaatgtctggttgaccaggagctgctgtcc atgaccaacttccaggaatatatcccagtggatgtggagatggagaaggcagccgggccg accagtttcttctcccagacccgtcagcgtatggtcctggatggggtgacactagccaac ctagagatcctgcagaatgtgtcggggggtacagaggggaccttgttggaacgcctggat acctgtagtactccatttggtaaaaggttgctgaagcagtggctctgttccccgctctgt aaccccacatccataggggaacgcctggatgccctggaggacctgatgggagtgcaggcc caggctacggaggtctcagacctgctcaaaaagctccctgatctggagaggctccttagt aagatccacagcatcggtactccgaagggtcaggaccacccggacagcagggctgttctg tatgaagaggtcacctacagtaagaaaaagattgcggacttcctctcggctctggagggc ttcaagaccatgcaagagattgtgaccatactaggaccggtcgcggtcgacttccggtcc aggctgctgcgccaggtggtcaacctgaaggatgactgtcaggagggcctcttccctgac ctgtcggccgagctgaaacgctgggacacagccttcgaccaccagaaggcccgcgccacc ggagtcatcacccctaagactggctttgacccagagtttgatcaggctctcagcggcatc aaggcctgtgagagggacctacaggactacctggacaggcagaagaagaggctgggctgc aggaacctgacctactgggggatgggacggaaccgctttcagatggaagtaccagacagt gtctcggagaggaacattcctgaggagtacaaggtgaagtccactaagaagggctggaaa cgctactggaccagggagatagagcgtctgttctcagagctccagagtcttgaggagaag agagacgcagctctgaaggactgcatgagaagactcttctacaactttgacaagaactat agggactggcagactggggtggagtgcatggctgtgctagatgtgttactgagtctgaca cggtacagccaggggggtgatggaggaccaatggcacggcctcaagtactacttcctggt gacatcagccaatcagcagccttcctggacttaaggggctcccgccacccctgtgtcacc aaaaccttcttcggtgatgacttcatccctaatgacattgctattgggtgccctggcggc gaggaggagggccaggaggataaaggacatgcaccctgcgtgctggtcactgggcctaac atgggaggaaagtcgactcttatgagacagtgtggtctggtggtggtcttggcccagttg ggttgctatgttcctgctgagagcctgtcctttacccctgtggacagagtcttcacccgg ttgggagcatcggaccgtatcatggctggggagagcaccttctttgtagagctcagtgag actgcaagtatcctccaccatgggaccaagcactccctggtgctgctggatgaactggga aggggcacagccacatatgacggcacagcgatagccagtgctgtggtgaacgagctggcg aaaaggatctgctgtcgtaccctcttctccacacattaccactccttagtagaagactac accaacaaccctgctgtacggctcggacacatggcctgtatggtggagaatgagggagat gaggaccctagtcaggagaccatcaccttcctctacaagtttatcgcgggagcttgtcct aaaagctacggtttcaacgctgctcgcctcgccaacctgcctgaggatgttatacaatca ggccacaggaaggccaaggagtttgagaggagcaccatttccctacgagtcttcaagaag ctgtgtttgtatgctgaagaccccacagcagccagcacacagtttgccttgctcctccgg atgatcagcaacctgtga

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