Oncorhynchus gorbuscha (pink salmon): 124040314
Help
Entry
124040314 CDS
T07892
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124040314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124040314
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
124040314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
124040314
NCBI-ProteinID:
XP_046213334
LinkDB
All DBs
Position
LG07:complement(70984154..71615734)
Genome browser
AA seq
1507 aa
AA seq
DB search
MVLAMRHGSHLIWVGLLLCCMVDMGATMEFTGAEGQWARFPMWNACCESEMSFNMKTKSS
HGLLVYFDDEGFCDFLELLIHNGKLSLRFSIFCAEPATVLTNTAVNDSQWHAVTIWRNFK
NTTLMVDNEVKWVEVKSKRRDMTVFSHLFLGGIPPELRSVALRLTSAVVKDHVPFTGWIT
DIKVNNTESALLNSAGVINDLCGAAANMCLNGGVCNVINDEPTCDCSQTDYQGKDCSEED
NHVEGLAHLMMGDQGKSKGRREGEGWLRRSLLSIPGKEDYVATFKGSEFFCYDLSLNPIQ
SSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKF
NDNDWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPST
ADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRMAKQGDAKMKVHGIVAFKCENVATLDPI
TFETPGSFITLNKWNAKKTGSISFDFRTTEPNGLLLFSHGKPKQAPKDSKSPLTLKVDFF
AIEMLDGHLYLLLDMGSGTTKTRAINKKVNDGEWYHVDFQRDGRSGTISINTQRQAYTAP
GESEILDLDDNLYLGGLPENKLGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRMAE
VQKATGVKPSCSKEPPKQCLSNPCQNNGVCREGWNRYVCDCSGTGYLGRSCERDATILSY
DGSKFMKIQLPVVMHTEAEDVSLRFRSQRAYGVLMATTSRDSADTLRLELETGRVRLTVN
LDCIKINCTTSKGPETIFAGQNLNDNEWHTVRVFRRGKSLKLTVDDLQPVEGQMAGDHTQ
LEFHNIETGIVTEKRFMSMVPSNFIGHLQSLSFNGMAYIDLCKNGDIDYCELNAMIGFKN
IIADPVTFKSRSSYLALTTLQAYYSMHLFFQFKTTSSDGLILFNSGDGNDFIVVELVKGY
LHYVSDLGNGAHLIKGNSNKPLNDNHWHNVMISRDTNNLHTVKIDTKITTQTTMGAKNLD
LKGDLYIGGVAKETYKELPKLVHAKEGFQGCLASVDLNGRLPDLMSDALACVGQIERGCE
GPSTTCQEDSCANQGVCLQQWEGFSCDCSMTSFGGPLCNDAGTTYIFGRDGGLITYTWPP
NDRPSTRADRLAIGFSTQLKDAVLVRVDSSSGLGDYLKLHIEKGNIAVIFNVGTDDINIE
ETAKFVNDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGNNDNERLAIARQRIPYRLGRV
VDEWLLDKGRQLTIFNSQTTIQIGGWDRDRSRPFQGQLSGLYYNGLKVFNMATEGDRNIR
IQGSVRLVGESPSSITPQSSANTANRSETSTSIMEITTTTASSRRVKQTTPREPQQTTDD
LLVASAECPSDDEDIDPCEPSSGGLANPTGPAVKGYPGPSEGVFRESSSTTGMVVGIIAA
AALCILILLYAMYKYRNRDEGSYHVDESRNYISNTSQSNGTVVKEKPPNAAKTSSKSKKN
KDKEYYV
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggttcttgcaatgcggcatggctcccatctaatatgggtaggccttctcttgtgctgt
atggtagacatgggggcaactatggagtttacaggcgcagagggccagtgggccaggttt
ccaatgtggaatgcatgttgtgagagtgaaatgagcttcaacatgaaaactaagagttcc
cacgggctgttagtgtacttcgatgacgagggattctgtgactttttagaactcctaata
cacaacggtaaactcagtcttcgattctccatcttctgcgctgagcccgcaacggttcta
accaacacagcggtcaatgacagccagtggcatgctgtgacaatatggagaaactttaaa
aacacaacgctaatggtcgacaatgaagtgaagtgggtcgaagtaaagtcgaaaagaagg
gatatgactgtcttcagccacttgtttcttgggggaataccaccggaattacgatctgtg
gctttaaggttaacatcagctgtggtcaaggaccatgtaccttttaccgggtggataacg
gacataaaggtcaacaatacggaatcggcgcttttaaacagcgctggggtcattaacgac
ctctgtggtgcagcagccaacatgtgtttaaatggaggggtctgcaatgtcattaacgat
gaacccacgtgcgactgctcgcagactgactaccagggcaaagactgcagcgaagaagac
aaccatgttgaaggtctggcgcacttgatgatgggcgaccaaggtaaaagtaaagggcga
agggaaggagaaggttggcttcgaaggtccctactgagcattccaggaaaagaagactac
gtggcgaccttcaagggatccgagttcttctgctacgacctgtccttgaacccgatccag
agcagcagcgacgagatcaccctgtccttcaagacgttacagaggaacggtctgatgctt
cacacggggaagtctgcagactacgtcaacctggccctgaaaaacggagctgtatcgctg
gtcattaatttggggtctggggcctttgaagctctggtggaaccagtcaatgggaaattc
aatgacaatgattggcatgatgtcaaagttacaaggaatctacgtcagcactcaggcatt
ggacacgctatggtaactatatccgtggatgggatactgaccaccacagggtatactcaa
gaagactacaccatgctaggctccgacgactttttctatgttggcgggagtcctagcacg
gctgacctgcctggatcacctgttagcaacaactttatgggttgcctgaaagaggttgtg
tataaaaacaacgacgtgcgactcgagctctccaggatggccaaacaaggtgatgccaaa
atgaaggttcacggcattgtggcttttaaatgcgagaacgtggcgacccttgaccccatc
accttcgagacccctgggtccttcatcacgctcaacaagtggaacgccaagaagacgggc
tccatctccttcgacttccgtaccacagagcctaacgggcttctcctctttagccacgga
aagcccaaacaggctcccaaggattccaagagccccctgacactgaaggtggacttcttt
gccatcgagatgctggatggccacttgtatctattgctggacatggggtcagggaccacc
aagaccagagccatcaacaagaaggtcaacgatggggagtggtaccacgtagacttccaa
cgggacggacgatcaggtaccatctccatcaacacccagcgccaggcctacacggcccca
ggagagagtgagatcctggacctggatgataacctgtacctgggaggactaccagagaat
aaactaggcctggtcttccccacagaagtgtggacggctctcctgaactatggctacgtg
ggctgtatccgggacctgttcatcgatggccagagtaaagatgtccgccgcatggccgag
gttcagaaggctaccggagtcaaaccatcctgctctaaagagccgcccaagcagtgcctg
tcaaacccctgtcagaataacggtgtctgccgggagggatggaaccgttacgtctgtgac
tgctcagggacgggatacctgggacgctcctgtgagagggatgcgaccatcctgagttat
gacggcagtaagttcatgaagatccagttgccggtggtgatgcacacagaagcggaggac
gtgtcgctacggttccgttctcaacgggcatatggtgtgctgatggccacaacgtcacgt
gacagcgcagacacgctgcgcctggagctggagactggccgtgtccgcctgacggtcaac
ctagactgtatcaagattaactgtactaccagcaagggtccagagaccatatttgctggt
cagaacctgaacgataacgagtggcacacggtgcgtgtgttcaggaggggaaagagtttg
aaactcaccgtagatgatcttcaacctgtagaaggtcaaatggcaggtgaccacacccag
ttggagtttcacaacattgagacgggtatcgtgacggagaaacgattcatgtccatggtg
ccttccaacttcataggccacctccagagcctctccttcaacggcatggcctatatagac
ctgtgtaagaacggtgacattgactactgcgagctcaacgccatgatcggcttcaagaac
atcattgctgatccggtcacgttcaagtcacggtcgagctatttggctctgaccaccctg
caggcctactactctatgcacctattcttccagttcaagaccacctcatcagatggactc
atactgttcaacagcggggacggaaacgacttcattgtggtcgagctggtcaagggctac
ctgcactacgtatcagacctggggaacggagctcacctgatcaagggcaactccaacaag
cccctgaatgacaaccactggcacaacgtcatgatctcacgagacactaacaacctccac
accgtcaagatcgacaccaagatcaccacccagaccaccatgggagccaagaacctggac
ctgaagggtgacctgtatattggtggcgtggccaaagagacgtacaaggagcttcccaag
ttggtacacgccaaggagggcttccagggttgcctagcatcggttgacctgaacggacga
ctcccagacctgatgtcggacgccctggcatgtgtgggccagatagagagaggctgcgaa
ggccccagtacaacgtgccaggaggactcgtgtgcaaaccagggtgtgtgtctgcagcag
tgggaggggttcagctgtgactgtagcatgacttctttcggagggccactctgcaacgac
gctggaactacgtatatatttgggcgtgacggtggtctgatcacgtatacatggcctccc
aatgacaggcccagcacgcgggcagacaggctggccataggcttcagcacacagctgaag
gatgctgttctggtgagggtggacagctcctctggccttggagactacctgaagctacac
attgaaaaaggaaacattgcagttatatttaatgtcggaacggacgacataaatatcgag
gagacagcaaagtttgtaaatgatggaaagtaccatatagtgaagtttacgcggagtggc
ggtaacgccacactacaggtggatgacctacctgtcatagagcgctatcccacaggcaac
aatgataacgaacgcctggcgattgctagacagcgaatcccatatcgacttggtcgagta
gttgacgaatggctactcgacaaaggtcggcagctcactatcttcaacagccagaccacc
atacagataggtggctgggaccgggacaggagtcgcccgtttcagggccagctctcaggc
ctctactataacgggctgaaggtgttcaacatggccacagaaggagatcgtaatatccgc
atccagggcagcgtgaggctggtgggggagtcgccctcgtccatcacgccacagtcgagt
gccaacacagccaaccggtcggagacgtccacatccattatggagatcaccacgacgaca
gcgtccagtaggagggtgaagcagacgacgccacgggaacctcaacagacgacggatgat
ctgctggtggcatctgcggagtgtccgagcgatgacgaggacattgatccctgtgagccg
agctcaggtgggttagctaacccaacaggtccggcggtgaagggctatcctggtccatcg
gagggggtgttccgtgagtcaagcagtaccacagggatggtggttggaatcatagcggca
gccgccctctgtatcctcatcctgctctatgccatgtacaaataccgcaaccgggacgag
ggttcttaccatgtagacgagagccgtaactacatcagtaacacatcgcagtccaacggg
acggtggtgaaggagaaaccgccaaacgccgccaagacttcctctaagagcaagaagaat
aaagacaaggagtactatgtgtga
DBGET
integrated database retrieval system