Oncorhynchus gorbuscha (pink salmon): 124040323
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Entry
124040323 CDS
T07892
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124040323 (lingo1a)
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124040323 (lingo1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
LRR_EndoS
LRR_Zer-1
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
124040323
NCBI-ProteinID:
XP_046213380
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All DBs
Position
LG01:56775848..56829609
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AA seq
610 aa
AA seq
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MGAREASGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVICHRKKLMSVPE
GIPTETRLLDLSKNRIKTINMDEFATYPNLEELELNENTISAIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSMEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLIFLRLRHLNIYVIKDYSFKRLYRLKVLEIA
NWPYLDTMTSNCLYGLNLTSLTITNGNLTSIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKIFNVSGNALSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKAQQKFVDEGTTIHFVCQADGDPAPVIMWLSPQKQFITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHVHSYSPDWPHQPNKTFAFISNQPNENGGNGTRTN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGATKHNIEIEYVPRKSDAGMS
SSNADAPSQV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggggccagggaagcgagtgggcacagctacctggtggcttgctggcagcccattctg
attctgatgctgggcaccgtactgtccggttccaccacaggttgcccgtcccgctgtgag
tgcaatgcccaggagcgctcagtcatatgccaccgcaagaagcttatgtccgtccctgag
ggcatccccacagaaacgcggctgctcgacctcagcaagaaccgcatcaagaccatcaac
atggatgagttcgcaacctaccccaacctggaggagctggagctcaacgaaaacaccatc
tccgctattgagcccggtgccttcaacaacctgtacggcctccggacattggggctgcgc
agcaacaagctcaaactcatccagctgggtgtgttcacgggcctcagcaacctcacccag
ttggacatcagtgagaacaagatagtcatcctgctggactatatgttccaagacctgtac
aacctgcgctccatggaggtgggcgacaatgacttggtattcatctcccaccgggccttc
catggtctcagcagcctggagcagctgactttggaaaagtgcaacctgacctcggtgccc
accgaggccttcacccaccttcacagtttgatctttctcaggctgcgccacctcaacatc
tatgttattaaggattactccttcaaaagactgtaccggctgaaagtgctggagatcgcc
aactggccctacctggacaccatgacctccaattgcctctatggactgaacctcacctcg
ctgaccatcaccaatggcaacctgacctccatcccatacgtggctctccggcacttggtc
tacctacggtttctgaatctgtcctataaccccatccacaccattgaggggaataaactc
catgaccttctgaggctccaggagtttcacctggttgggggcaggctggctatgatcgag
ccctactcgttccggggcctaaactatctgaagatcttcaatgtgtctggcaatgccttg
agcaccttggaggagtctgcgttccactcggtaggcaatctggagactctggcgctttac
gataaccccttggcatgtgactgccggctgctgtgggtgttccggagacgctggaggctc
aacttcaaccggcagcaacccacctgcgcttcacctgagttcgtacagggaaaagagttt
aaagatttcccggacgtcctgcagcccaactacttcacgtgtcgcaagtccaggatccgg
gaccgcaaggcgcagcagaaatttgtggacgagggaactactattcattttgtatgccag
gcggacggtgatcccgccccagtcatcatgtggctctcaccccagaagcagttcatcacg
accaaaaccatcggacggctcacagtattcccagatggcacccttgaggtgcgctacgcg
cagattcaggataatggaacgtatgtgtgtatagccagcaacgccggtggcaatgacaca
tctctcgcccacctgcacgtccatagctactctccagactggcctcaccaacccaacaag
acctttgcattcatctccaaccagcccaatgagaatggtggaaatgggacgcgaaccaac
gtcccgttccccttcgacatcaagaccttaatcatcgccaccactatgggtttcatatct
ttccttggtgtcgtcctgttttgtctggtgctactctttctgtggagtagaggtaaaggg
gccacaaagcacaacatagagattgagtatgtgccacgcaagtcagacgctgggatgagc
agcagcaacgcagacgccccctcgcaagtttaa
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