Oncorhynchus gorbuscha (pink salmon): 124040397
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Entry
124040397 CDS
T07892
Name
(RefSeq) serine/arginine-rich splicing factor 2-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124040397
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124040397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124040397
Spliceosome [BR:
ogo03041
]
Common components
Common spliceosomal components
SR proteins
124040397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124040397
NCBI-ProteinID:
XP_046213512
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All DBs
Position
LG07:complement(77246078..77250876)
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AA seq
211 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDNRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHFGRRGGGGPPRRHGGYGRRSR
SRSASPRRRRRSRSRSRSRSRGRDYSRSRSRSDSRSRSKSRTPRKSKSPSRSRSRGASRS
RSRSPASNRGSKSRSRSKSRPKSPEDNGTDS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggaaggccgccgcccgatgtcgagggtatgacctcgctcaaagtggacaat
ctcacctaccgaacttctcccgagacactacgacgagttttcgagaagtacggccgggtg
ggagacgtgtacatcccccgcgatcggtacaccaaggagagccgcgggttcgctttcgtg
cggttccacgataaccgcgacgccgaagacgcgatggacgccatggacggggccttgctt
gacgggcgggaactgcgagtccagatggcgcgctatggccgtccaccagactctcacttc
gggcgccgaggcggcggtggacctcctaggaggcacggaggctatggtcgcaggagcagg
agtcgttcggccagcccccgtcggcgcagacgcagtcgttcccggagcaggagccgctcc
cgtggccgtgactacagccgctcccggtctcgttccgactctagatcccgttccaagtcc
cgcaccccccgcaagagcaagtccccatctcgatcgaggtcccgtggtgcttccaggtcc
cgttcccgcagcccggcttccaacagaggctccaaatccaggtcgcggtccaagagcagg
cccaagtcccccgaggacaacggaaccgactcctag
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