Oncorhynchus gorbuscha (pink salmon): 124040416
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Entry
124040416 CDS
T07892
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124040416
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124040416
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124040416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_10
ANCHR-like_BBOX
LED_rpt
COG6_N
Motif
Other DBs
NCBI-GeneID:
124040416
NCBI-ProteinID:
XP_046213543
LinkDB
All DBs
Position
LG07:complement(80560668..80586178)
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AA seq
759 aa
AA seq
DB search
MADTELKPESKPDQELCCTVCSSALNGDKSSTCGHLVCASCLGKKSKGCPQCLQCSGKPI
PASVEQNGTMIEIVAESPLVIKTEEREKRDTQTQISKTPDKAMIQEDLKESEDPETPEDA
KIQEDLKESEDPKTPEDAKIQEDLKESEDPKTPEDAKIQEDLKESEDPKTPEDAKIQEDL
KESEDPKTPEDAKIQEDLKESEEEKNKESDPPQPAEEVKEDVGVGERDTLREEKAKGEVK
VEPLGPDDVVCDSCMEMSPCRALKSCLTCLVSYCEAHLRPHLENPKFQNHRLVEPLRDIE
RRTCETHKWPLDLFCCADAVCVCQDCVTEDHRGHNTVPVMEARRNIERELLDKQAEMVRT
MTAAENAINKLQVNTVSIENSVTEVREVIENQFTVLQAAVERAKREVTEILEGEEKQALR
QADGIKVHLEQRCTELKKTQAQVEKLSKNKNDVDFLQEYSEWKKDCSDIPLPGVYIGLVD
RLNSFSREIVTSTQELCEVQLSNYIESLKETCKNDMMGIKTTVHEIIAAKQNMDVPDPKT
REDFLKYANPVSFDADTAHKFLRLTEENRKVTNTTPWQHPYPDVPERFESWRQVLATESF
YVGRHYFEVDVSGEGTYVGLTYKSIDRKGPESNSCITGNDFSWCLQWNGRSFSAWHGDVE
TPLSVDKFTRIGVYVDYSSGILAFYGVDDVVGMTLIHKYKAEFLEPLYPAFWLSKKENVV
VLVEPGEPLTMKSPSLPKIPFNTDAAPQSRFTVTLVVEQ
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacagaactcaaaccagagtcaaaaccagaccaggaactctgctgcactgtt
tgttccagtgctctcaatggtgacaaatcctctacctgtggccacttagtctgtgcctcc
tgcctgggcaagaaaagtaagggctgcccccagtgtttacaatgctctggcaagcctata
ccggcatctgtggaacagaacggaacgatgattgaaatagtggctgagtctccactggtg
atcaaaaccgaagaaagagagaaaagggatacacaaacccaaatttcaaagacacccgac
aaggcaatgatacaggaagacctgaaggaatcagaggaccccgagacaccagaggatgca
aagatacaggaagacctgaaggaatcagaggaccccaagacaccagaggatgcaaagata
caggaagacctgaaggaatcagaggaccccaagacaccagaggatgcaaagatacaggaa
gacctgaaggaatcagaggaccccaagacaccagaggatgcaaagatacaggaagacctg
aaggaatcagaggaccccaagacaccagaggatgcaaagatacaggaagacctgaaggaa
tcagaggaagagaaaaataaagagagtgatcctccacagcctgcagaggaagtgaaagag
gatgtgggggttggggagcgagacacattaagggaagagaaagcaaaaggagaggtgaaa
gtagagccgttggggcccgatgatgttgtgtgtgactcgtgtatggagatgagcccgtgc
cgggccctcaagtcctgcctcacctgccttgtgtcctactgcgaggcccaccttaggcct
cacctggagaaccccaagttccagaaccacaggttggtggagccgctgagggacatcgag
agacggacctgtgagacccacaagtggcccctggaccttttctgttgtgccgacgctgtg
tgtgtctgtcaggactgtgtgacagaggaccacaggggacacaacactgtgcctgtgatg
gaggcacgcagaaacattgagagggaactactagataagcaagcagagatggtgaggaca
atgacagcagcagagaatgccatcaacaaacttcaagtcaacacggtctctattgagaat
tcagtgacggaggtccgtgaggtgattgagaaccagtttacggtgctccaggctgcggtg
gagcgggccaagagagaggtgacagagatcctggagggagaggagaagcaggctctgaga
caggccgatgggatcaaggtacacctggagcagaggtgcactgagctgaaaaagacacag
gcgcaggtggagaagctctccaagaacaagaatgatgtggacttcttacaggagtactcc
gagtggaagaaggactgctccgacatccccctacctggggtctacatcggcctcgtggac
cggctcaactccttcagcagagagattgttacctccacacaggagctgtgtgaggtgcag
ctgtccaactacattgagtcactcaaagagacctgcaaaaatgacatgatggggattaaa
accacagtccatgaaataatcgcagccaaacagaacatggacgttccagacccaaagacg
cgggaggactttctaaagtatgccaatcctgtgagttttgatgcggacacggcccataaa
ttcctgcgtctgactgaggaaaacagaaaggtgaccaacaccacaccctggcaacacccg
taccccgacgtccctgaacgttttgagagctggcgacaggtactggccacagagagcttc
tatgtcggccgacactacttcgaggtggacgtgagcggcgagggcacgtacgtcggactc
acctacaagagcatcgaccgcaagggtcctgaaagtaacagctgcatcaccggcaatgac
ttctcatggtgcctccaatggaacgggcgtagcttctctgcctggcacggtgatgtggag
acgcctctaagcgtggacaagttcactcgcattggggtctatgtggactatagcagtgga
atactggctttctacggggtggatgacgtcgtcggcatgaccctcatccacaaatacaag
gctgagtttctggagcccctctacccagccttctggctgtcgaagaaggagaacgtggta
gtgcttgttgaacctggagagccgctgacaatgaaaagcccctctctccctaaaataccc
tttaacactgacgcagcaccccaaagccgtttcactgtaactcttgttgttgaacaatga
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