Oncorhynchus gorbuscha (pink salmon): 124040455
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Entry
124040455 CDS
T07892
Name
(RefSeq) protein jagged-1b-like isoform X1
KO
K06052
jagged-1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04330
Notch signaling pathway
ogo04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124040455
04371 Apelin signaling pathway
124040455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ogo04090
]
124040455
CD molecules [BR:
ogo04090
]
Proteins
124040455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
hEGF
EGF_TEN
JAG1
EGF_DL_JAG
DSL
EGF_2
JAG1-like_EGF2
EGF_CA
EGF_Teneurin
DAG1
Motif
Other DBs
NCBI-GeneID:
124040455
NCBI-ProteinID:
XP_046213628
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All DBs
Position
LG07:complement(87523613..87733946)
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AA seq
1302 aa
AA seq
DB search
MILRLGSVVGVAAFCLHALLLWFYAKVVEGTGQFELDILSMNNRNGELLNGQCCDGSRIT
GDRKCRMDECDTYFKVCLKEYQSRVSAAGPCSFGSGSTPVLGGNVFSLKSSARNEGSRIV
LPFSFAWPRSYTLIVEALDANNDTSGGDGQVIEKASHSGMINPSHQWQKLSHNGPIGQFD
YQIRVSCDEHYYGFGCNKFCRPRDEFFGHYTCDYNGNKTCLEGWSGLECNTPICRQGCST
EHGHCKEPDDCKCLYGWQGQYCDQCNPHPGCIHGTCVEPWQCLCDTNWGGHLCDKDLNFC
GTKQPCLNGGICSNTGPDKYQCSCVEGYSGVNCERAEHACLSNPCSNGGSCVETSQGYGC
VCGAGWSGPSCSINVDECSPNPCNHGGTCQDLVHAYKCHCPPQWTGKTCRIDANECDSKP
CVNANSCRNLIGGYFCECDAGWTGLNCDINLNDCKDQCHHGGTCMDLVNGYRCVCPAGYS
GDHCERDVDECAGAPCLNGGRCQDQVNGFTCLCLAGFSGHFCQLDIDYCFSNPCQNGALC
FNVAKDYYCGCSEDYEGKNCSHLKDHCHTTTCKVIDSCTVAVGANSTPGGERYISSNVCG
PHGRCRSQAGGQFSCDCQEGFRGTYCHENINDCESSPCGNGGTCIDKVSVYKCICGDGWE
GDHCEINIDDCSTSPCHNGGTCRDLVTDFFCECMNGWKGKTCHSRESQCDEVTCNNGGTC
HDEGDTFQCKCSPGWEGATCNIAKNSSCLPNPCQYGGTCVTSGDSFTCICKEGWEGDTCK
QNTNDCNPHPCYNSGTCVDGDNWYRCECTPGFAGPDCRININECQSSSCVFGATCVDEIN
GFHCLCPQDRSGPRCQDVTGRPCSGNSRVIPDLAKWDEDCNTCRCFNGKVVCTRMWCGLR
SCRVSGGVKGHGSRGGGVGCLSGQSCVPIREEQCFIRPCLGQGECHPSSPPPNKCHPSSG
YHDSSCANVTLTFTKDTMPRGLSIEAVCKQLRQLYVVKNVSSEYSVSITCDPSTSASNEI
HLSIYTVDQWMDRSPIKEITERIIDLVSKRHGNNSIITAIAEVRVQRTPSTSHTDYMVPL
LSSVFIVLWILVLVSVFLCCMRRRRKHGNGASSSAATDDNTTNNVREQLNQIKNPINVRH
AGSGHLTTSVVIKDYEDKNSIVAKVRTHHRPEGEEDDDKERQLGNKGRFVVTAKQPAYTL
VEREDQGLNGGLGANGPSDGDVRTAVQPSSKHPNWINKQDNRALETPHSINQMDYNRALE
TPHSINQMDYNRALETPHSINQMDYNRALETPHSINQMDYIV
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagactgggctcagttgttggcgttgctgctttttgtttacatgcgttattg
ttgtggttttatgcaaaggtggtggagggaaccggtcagttcgagttggacatcttatcg
atgaacaaccggaacggcgagcttcttaacgggcagtgttgtgacggttcacggatcacc
ggggatcggaaatgcaggatggatgagtgtgatacgtattttaaagtgtgtttgaaggaa
taccagtcgcgggtctcggctgcgggaccgtgcagtttcgggtccggatctacgcctgtc
ctgggaggaaatgtattttctttgaagagctctgcgaggaatgaaggatccaggattgtt
ttgccgttcagttttgcctggccaaggtcatacacgttgatagtggaagccttggacgct
aataacgacacgagtggtggtgatggtcaggtgattgagaaggcgtcccacagtgggatg
atcaaccccagccatcagtggcagaagctcagccacaacggtcctattggtcagtttgac
tatcagatccgggtcagctgtgacgagcactactacggcttcggatgcaacaagttctgc
cgaccccgagacgagttcttcggacactacacctgcgactacaacgggaacaagacctgt
ctggagggctggtctggactagaatgtaacacacctatctgtcggcagggctgcagtaca
gaacatggacactgcaaagagccagatgactgcaagtgtctgtatggctggcaggggcag
tactgtgaccagtgtaatcctcaccctggctgtatccatggaacctgtgttgaaccatgg
cagtgtctgtgcgataccaattggggaggacatctctgtgacaaagatctgaacttctgt
gggaccaaacagccctgtctgaacggaggaatctgcagcaacacgggacctgacaaatac
cagtgttcctgtgttgagggctactctggagtcaactgtgagagggcagagcatgcgtgt
ctgtccaacccctgctctaatggagggagctgtgtcgagaccagtcagggttatgggtgt
gtatgtggagcgggttggagcggaccctcctgtagcatcaatgttgatgagtgctctcct
aacccctgtaaccacggtgggacctgtcaggatctggttcatgcttataagtgtcactgt
cctcctcagtggaccggcaagacctgtcgcatagatgccaacgaatgcgacagcaagccc
tgtgtcaacgccaactcctgccgcaacctgattggtggatacttctgcgagtgtgacgct
ggttggacggggctgaactgtgacatcaatctcaacgactgtaaagaccagtgccaccac
ggaggaacctgcatggacttggtgaacgggtaccgctgtgtgtgtcctgcgggttactct
ggagaccactgtgagagagatgtggatgaatgtgccggcgctccctgtctgaacggcggg
cgatgccaagaccaggtcaacggattcacctgcctctgtctggccgggttctctggacat
ttctgccaattggatatagactactgcttctccaacccctgtcagaacggtgctctatgc
ttcaacgtcgctaaagactactactgtggctgttcagaagactacgagggaaagaactgc
tctcacctcaaagaccactgtcacaccaccacatgcaaagtgattgacagctgcacggtt
gccgtgggagccaacagtacccctggaggggagcggtacatctcctccaacgtgtgtggt
cctcacggacgctgtcggagccaggctggaggacagttcagctgtgactgtcaggagggc
ttcagaggcacatactgtcacgagaatattaatgattgtgagagcagcccgtgtggtaac
ggaggaacctgtatagataaagtcagtgtgtacaagtgtatctgtggagacggctgggag
ggggaccactgtgagatcaatatagatgactgcagcactagtccatgtcataatggagga
acatgtcgagacctggtgactgatttcttctgtgagtgtatgaacggctggaaggggaag
acctgccactcccgtgagagccagtgtgacgaggttacctgtaacaacggagggacatgt
catgatgagggagacaccttccagtgcaagtgttcccctggatgggagggggctacctgt
aatatagctaagaacagcagctgtcttcctaacccctgccagtacgggggaacctgcgtg
accagcggggactccttcacctgcatctgcaaggagggctgggagggagacacctgtaaa
cagaataccaacgactgtaatccccacccatgttataacagtgggacctgtgtggatggt
gataactggtatcgatgtgagtgcacaccagggttcgctgggccagactgcaggatcaat
atcaacgaatgccagtcctcgtcgtgtgtgtttggtgctacctgtgttgatgaaatcaat
ggcttccactgcctgtgtccccaagacagatcaggaccacgttgtcaggatgtgacaggg
agaccgtgctcagggaacagtcgtgtcattcctgatttagccaagtgggatgaggactgc
aacacctgccggtgctttaatgggaaggttgtctgtactcgaatgtggtgtggtcttagg
tcctgccgagtcagcggtggggttaaaggccacggtagcagaggaggtggggtcgggtgt
ctgtctggtcagagctgtgtaccaatcagggaggagcagtgtttcatccgaccatgtctg
ggtcagggggagtgccacccctcctccccaccgcccaacaaatgccaccccagctccggt
taccacgacagcagctgtgctaacgtaacacttacgttcaccaaagataccatgcccagg
ggtctgagtattgaggcagtgtgtaagcagctgagacaactgtacgtggtcaagaatgtg
tcctctgagtattctgtttccataacctgtgacccttcaacctccgccagcaacgagatc
catctcagcatctacacagtggaccagtggatggacagatcacctataaaggagataaca
gagaggatcatcgatctggtgtctaaacgccatggcaacaacagcatcatcaccgccatt
gctgaggtcagagttcagcggacgccgagcactagccacaccgactacatggtccccctc
ctctcttcagtcttcatcgtcttgtggatcctggtgctggtctccgtcttcctgtgctgc
atgcgtcgccggcggaaacatggcaacggagcctcgtcgtccgcggcgacagatgacaac
accaccaacaacgtccgtgagcagctcaaccagatcaagaatcccatcaacgtgagacac
gccggcagcggccatctgacgacgtcagtggtcatcaaagactacgaggataaaaactcg
atcgtcgccaaggtacgaacacaccaccgccctgagggggaagaggacgacgataaagag
agacagctagggaataaaggacgctttgtggttacagccaaacagcccgcctacacactg
gtggagcgggaggatcagggcctcaatggaggcctgggggccaatgggcccagcgacggg
gacgtcaggaccgcggtgcagcccagctccaaacaccctaactggattaataaacaggac
aacagagccctggagacgccacacagcatcaaccagatggactacaatagagccctggag
acgccacacagcatcaaccagatggactacaatagagccctggagacgccacacagcatc
aaccagatggactacaatagagccctggagacgccacacagcatcaaccagatggactac
atcgtatag
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