Oncorhynchus gorbuscha (pink salmon): 124040759
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Entry
124040759 CDS
T07892
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124040759
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Others
Others
124040759
Endosome - Lysosome transport
124040759
Endosome - Golgi transport
124040759
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
124040759
NCBI-ProteinID:
XP_046213804
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All DBs
Position
LG08:complement(15176321..15236718)
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AA seq
1247 aa
AA seq
DB search
MVVSGSVWCWALLTCILISFYNMLTAYAEISWPASSTTTNVWFNRMDKLPLELRANLKSA
WVKVPKYIDKESTFSRDFRMETIDGKSVVPKGEEKLPKDLDGVIGKVLPDAVSTVRDKKA
PNRSKNFTADSKKSDSSFEVKDGTFASSNRTRTKRSTSFGEYSDRSQIGGPGDAFSAEKL
VEPLQGVYSSRTEYRRTGEDARTSPRQSEPLLVTSTFPLSGDSAHNQAMGHWVGENSSVI
LTLTKQYDFNLGAFTESSLWRSVDYGSTYIKLNKKVGSTLACLYVCPTNKRKIMMLSDPE
LEQSVLISSDEGASFEKYPINFYMDGLLFHPTQDNWLLASSPDNKVYSTMDFGRKWQLVS
ENVTPGRFFWAQTGLDREADVVHMETHIAKGRAQYVKCRAQRCTESNRQYLFPGYIDKNS
LVVQDNYVFVQVTKSGQASYFVSYMRESFKRIQLPKYCLPKDMHIISTNEKQVFSAVQEW
NQNDTYSLYISDSPGVYFTLSLENLRTRREPGGNVLVDLYKVEGINGIFLANKLVGHEVK
TFITYNKGQTWALLQAPNTDVAGNSLHCILPFCSLHLHLDTPVNPYLPGRIFSMDSAPGI
IVATGNIGTELSSANLGMFITSDAGNSWRQIFEEELGVWFLDNGGALVAVSLVATVPIRH
VWVSLDEGKKWDRHSFSLAPLFLDGVLMQPENHIITFTGHLSRVSEWQLIKIDYKAIFSR
RCMDGDYQTWHLHNKGEPCVMGEKQTFMKRRPGNRCMLAQDYSRVISSEPCICRTYDFEC
DYGYERQADGKCTPAFWFNPSTVTRSCSTSHNYLNSTGYRKVLSNNCKEGGKDVYSPRKQ
HCSPRPPRGLRLTTSQGELTATVGSNVTFLVYLDDGNSLWTYIQLDFGDGITFMYNLSRR
GDGIKHSYREDGIFRVTAHAENSQGYDISSLFLHITSPVERVYLSAPIVAIRKKEANLTA
VVWPVHHRTLTFFWWFENSSEPLITLDGSISYTFWKEGMNRIMVQVSSGCNILQDTKVII
VKDFFKSLLLSFSPALDEHNPDIPEWREDVGRVVRTAVSQVSGFPEERLLVSLFPGVPTT
AELFILPETQLPEHGKQNKENLVSISNLVINALNHGLVQFELKADTQIIVYITQLTLAPL
VYSNPIHSSSVMLMLLSVVFVGLAAFFIFKLKRKIPWIHVQAEENQEKEPEMIGTVGQNN
TMSKMKLSEFPTEKELMEKELKTRSRGEYGRNGERVITREFPTCTNV
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtctcggggtcagtttggtgttgggctcttttgacttgcattttaatctctttt
tacaatatgttgacggcatacgctgaaataagttggccagcgagttccacgacgacgaac
gtttggtttaaccgtatggataaattgcctctggagctgcgcgcaaacctaaaatccgca
tgggtcaaagtcccaaagtatatcgacaaggaatccacattttccagagattttagaatg
gaaacaattgatggaaaatccgtagttccaaaaggtgaggagaaattgccaaaggacttg
gacggagttattgggaaagtgctaccagacgctgtatctactgtcagagataaaaaggcg
cctaaccgttccaagaattttactgctgacagcaaaaagtctgacagttcctttgaagtt
aaagacggtacatttgcttcaagtaaccgtacgaggacaaagcgaagcacatcatttggc
gaatattcggacaggagtcaaattggaggtcctggtgacgcattttcagccgagaagctt
gtggagcctttacaaggcgtttacagttcgaggacagaataccgacgaactggggaggac
gcaagaactagcccgaggcaaagtgagccgcttctggttacctccactttccctctgtcc
ggagactctgcgcacaaccaggcaatggggcactgggttggagaaaacagcagcgtgatc
ctgaccttgacgaagcagtatgactttaacttgggtgctttcactgagagttctctgtgg
agatcagtggactatgggagcacttatataaaactgaataaaaaggttgggtcaaccttg
gcttgcctatacgtctgcccaaccaacaagagaaagataatgatgcttagcgacccagag
ctggagcaaagtgtactcatcagctcagatgaaggtgccagcttcgagaagtatcccatt
aacttctacatggacggtctgctgtttcatccaactcaggacaactggctactggctagc
agtcctgacaacaaggtttacagcacaatggattttggaagaaaatggcagttggttagt
gagaatgtaactcctggccggttcttctgggcacaaactgggctagacagagaggcagat
gtggtccacatggagacccacatcgccaaaggacgtgctcagtatgttaagtgcagagct
caacgatgcacagaatcaaacagacaatacctgttcccgggatacatagacaaaaattct
ctggttgttcaggacaactatgtgtttgtgcaggttaccaagtcagggcaggcgagttac
tttgtgtcctatatgagggaatcatttaagcgaattcagctacccaaatactgtcttcct
aaggacatgcacatcatcagtacaaatgagaagcaggtgttttctgctgtacaggagtgg
aaccagaatgacacctacagcctgtatatctcagactctccaggggtctacttcactctg
tctctagagaacctccggaccagaagagagccaggcggaaatgtactggtcgacctgtat
aaggtggaaggaataaatggcatatttctagccaacaaattggtgggccatgaagtgaag
acattcatcacctataacaagggtcagacctgggcccttctgcaagcccccaacactgat
gtggctggaaacagtctgcactgcatcctgccattttgttctctgcatctgcacctggat
acgccagtgaacccttacctgcctggacgcatctttagcatggactcagcacctgggatc
attgtagctacaggcaacattggtacagagctgtcctccgctaaccttggaatgtttata
acatctgatgctggaaatagctggagacagatttttgaagaagaactcggtgtttggttt
cttgacaatggaggtgctttagttgcagtttctttagttgcaacagtacccatccggcac
gtatgggtaagtctggacgagggtaagaaatgggatcgccacagtttctctctggctcct
ttgtttctggatggagttctcatgcagccagagaatcacatcatcactttcactggacac
ttaagccgtgtttcagaatggcagctgataaagattgactacaaagccatctttagcagg
agatgcatggatggagattatcagacttggcacctacataacaagggagagccatgtgtg
atgggagagaagcagacctttatgaaacggaggccgggtaaccgctgtatgctggctcag
gactactcccgagtcatatcctcagaaccatgcatctgcaggacatatgattttgaatgt
gattatgggtatgaacgtcaagccgatggaaagtgtacccctgctttttggttcaaccca
agcacggtgacaagaagctgtagcactagccataactacctcaacagcacagggtacaga
aaggttttgtccaataattgcaaagagggagggaaggatgtgtactcccccaggaaacag
cattgttcccccaggcctcccagaggcctcagactgactaccagccagggagagctcacc
gccaccgtgggcagtaatgtcaccttcctggtgtatctggacgatggaaactcgttgtgg
acttatatccagctagactttggggacggcatcactttcatgtacaacctgagccggaga
ggcgatggaatcaaacacagctatagagaagatgggatcttcagagtgacagcacatgca
gagaacagccagggttatgacattagctccctgttcctacacatcaccagcccagtggag
cgtgtgtatctctcagctcctattgttgccatccggaagaaagaagctaacctaacggct
gtggtctggcctgtccaccacagaacactcaccttcttctggtggtttgaaaacagttct
gagcccttaataaccttggatggaagcatctcgtacacgttttggaaggagggcatgaac
aggatcatggtccaagtgtcttctgggtgcaacatactgcaggataccaaggtcatcatt
gtcaaagatttcttcaaatccctgctgttatcgttctctccggctttggacgagcacaac
cctgacatcccggagtggagagaggacgtgggccgcgtggtgaggacagctgtatcacag
gtttctggatttccagaggaacggctgttggtatcgttgtttccaggtgttccaactaca
gcagaactatttatcctgcctgagacacagttgcctgaacatgggaagcagaacaaagag
aacttagtgagtatatcaaaccttgttataaatgccctgaaccacggattggtccagttt
gagttgaaagctgacactcaaataattgtttacatcacacagctaacattggcacctctg
gtttactccaaccctattcacagtagctcagtcatgctgatgttgctgtctgtggtgttt
gttggtttagctgcgtttttcatcttcaagttgaaaaggaaaatcccttggatccatgtc
caggctgaggagaaccaggaaaaggagccggagatgattggcacggtcgggcagaacaat
accatgtccaagatgaagctcagtgagttccccacagagaaggaactcatggagaaagaa
ctgaagaccaggagcagaggagaatatggaagaaatggggagagagtgatcacaagagaa
tttcctacctgtactaatgtctaa
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