Oncorhynchus gorbuscha (pink salmon): 124040998
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Entry
124040998 CDS
T07892
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124040998
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124040998
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124040998
NCBI-ProteinID:
XP_046214102
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Position
LG08:complement(66625838..66626965)
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AA seq
244 aa
AA seq
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MLMRISPCAIEMAKPLDHIKRPMNAFMVWSRGQRRKMSLENPKMHNSEISKRLGAEWKLL
SESEKRPYIDEAKRLRAQHMKDHPNYKYRPRRKPKSLLKKDRFLFPFPFLGDAEHLKGFS
TESILASAEKARALLPPTSSPYSLLDSGQFSTGAVQRISEIPHALAANGLSYAPSLGYQT
GAFGSLGCPSQHTHTHPSSTNPGYALPCNCGTWSATGLQPQVAYILFPGMAGIDPYSCSP
HSSV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcgcatttcaccgtgcgctattgagatggcaaaacctttggatcacataaag
aggcccatgaacgctttcatggtgtggtctcgcggtcagagacgaaagatgtcactggag
aatcccaaaatgcacaactctgaaatcagcaaaagacttggcgcggaatggaagttgctt
tccgaatcagagaagcgaccatacattgatgaagccaagagattgcgcgcgcaacacatg
aaagatcaccccaactacaagtacagacctcggcgcaaacccaagagcttgctaaagaag
gaccggttccttttcccctttcccttcctcggggacgcagaacatttgaaaggattttcc
acggagtccattttggcttccgctgagaaagctagagcccttttgccgccgacatcatca
ccatactcgctccttgactcaggtcaattcagcaccggtgctgtccagaggatctcagaa
attccccacgctctggctgccaacggcttgtcatatgcgccctctttgggataccagact
ggcgcgtttggaagtttgggatgccccagccagcacactcatactcacccgtcctccacg
aacccggggtacgccttgccctgtaactgtggcacctggtcggcgacgggtttacagcct
caggttgcatacatcctttttccaggtatggccggtatagacccgtactcctgttcacca
cattcaagtgtgtga
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integrated database retrieval system
