Oncorhynchus gorbuscha (pink salmon): 124041002
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Entry
124041002 CDS
T07892
Name
(RefSeq) transcription factor HES-1-B-like
KO
K06054
hairy and enhancer of split 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03460
Fanconi anemia pathway
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124041002
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124041002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124041002
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124041002
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
124041002
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
124041002
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
124041002
NCBI-ProteinID:
XP_046214107
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Position
LG08:67058270..67060304
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AA seq
266 aa
AA seq
DB search
MPADILEKTSPSSVAATPSSVNGNPDKPRTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDNSRHSKLEKADILDMTVKHLRNMQRLQMTGAISTDSSVLGKYRAGFSECMSE
VTRFLSTREGVNMEVMAQLLSHLAGCVSQINTVNYSTHRQSLTYPAHPAHPTLGQAIVQI
PNASPQLNVIMPCKSGSPIDFTSEVAKFYSGLQIVSATDGQFAFLIPSAAFAQMSVPNAL
RGNPTVAVAVSPVAPPITADSVWRPW
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgatattttggagaaaacctccccatcttctgttgcagccaccccgtcgagc
gtaaatggaaatccggataaaccaaggactgcctcagagcacagaaagtcttctaaacca
attatggagaagagaagacgcgcgcgaatcaacgaaagccttggacagctcaagaccctc
atactggacgctctaaagaaagataactccaggcattcgaagctggagaaggcagacatc
cttgacatgactgtgaagcacctaaggaatatgcagcgtcttcaaatgactggtgctata
agcacggattcatcagtccttggcaagtacagagcgggattcagcgagtgcatgagtgaa
gtcacccgttttctgtccacacgtgaaggggtgaacatggaggtcatggcccaacttctc
agccacttagccggttgtgtgtcacagatcaacaccgtaaactactcaactcatcgccag
agcctcacctaccctgcgcatccagcgcatccaacgcttggccaagccattgtgcaaatc
ccaaatgcctcgcctcagttgaatgtaatcatgccttgcaaaagtggctcgccaatcgac
ttcacgtccgaagtggctaaattctacagcggacttcagattgtttcagcgacagatgga
caattcgcctttctgattccaagcgcggcctttgcgcaaatgagcgtgccaaacgcccta
cgtggcaatccaacagttgcggtggcggtgtcacctgttgcacctcccatcactgcagac
tccgtgtggagaccatggtag
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