Oncorhynchus gorbuscha (pink salmon): 124041168
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Entry
124041168 CDS
T07892
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04517
IgSF CAM signaling
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124041168
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124041168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124041168
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124041168
Intermediate filaments
Intermediate filament-binding proteins
124041168
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
CH_2
Motif
Other DBs
NCBI-GeneID:
124041168
NCBI-ProteinID:
XP_046214373
LinkDB
All DBs
Position
LG08:9148435..9274668
Genome browser
AA seq
2354 aa
AA seq
DB search
MELQRATSMPGPLSPGHLSPGALSPSGPGPSLATSPGPDPGYSAKQAAFNYNQLEGRFKQ
LQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGR
MRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDIRVETE
DNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAILHKHRPDLIDFDKLKK
SNAHHNLQNAFNLAEQHLGIHKLLDVEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEG
KRIGKVLDNAIETDNMIQKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTY
RTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPRDGKLISDINKAWERLEKSEHERE
LALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAI
ETDIGAYEERVQAVLSVAKELEAENYHDIKRVTARKDNVLRLWEYLLELLKARRIRLEMN
LGLQRVFQEMLHIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQANRVKAV
NNNAQKFAIDAEGYKPCDPQVIRDRMAHMEFCYAELSQLAADRCARLEESRRLWKFFWEM
AEEEGWIREKEQILSSEDCGKDLTGAVRLLSQHRAFEDEMSGRAGHLQQTIKQGEELVAA
DHFGADKIRKRIQDIQAQWAALEGLSAVRKARLEEACNLHQFQADADDIDAWMLDVLRIV
SSADVGHDEFSTQALVKKHKDVAEEITSYRPVIDALHEQSKTLPKEQTGSEEVQGRLAGI
EERYKEVAELTRLRKQALQDALALYKMFNEAAACEVWIDEKEQWLNSMEIPEKLEDLEVV
QHRFESLEPEMNNQASRVAVVNQIARQLIHNGHPSEKEIKAQQDKLNTRWSQFRDLVDLK
KDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLAA
IEDKLGELGKEGECLATEHPDQAQGIMGRLGEITGVWDEMKGTLKNREESLGEASKLQQF
FRELDDFQSWLSKTQTAIASDDMPNTLTEAEKLLAQHEGIKNEIRNYEEDYQKMRDMGEM
VTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQAEAFLNN
QEYVLAHTEMPRTLEGAEGAIKKQEDFMTTMDANEEKIKAVVDTGRRLVSDGNVNADRIQ
EKVDSIDERHKKNRMMASELLCKLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEAR
NLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLIAEKPETESMVKEKLAALHKMWDDLES
TTQTKAKCLFDANKAELFTQSCADLDKWLVGVDGQIQSDDYGKDLTSVNILLKKQQMLES
QVEVRQKEVEELQSQAQVLSQEGKDTDEVDGQRRIVEKKFQQLLDPLRKRKGNLMASREI
HQFNRDMEDEILWVEERMPLAISTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFER
SLQVLKDDDDSLSGEEINQRVADLRRLWAQILEETGKRHGRLEEAHMAQQYYFDAAEAEA
WMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSQTSRGLTAAGHPES
ERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHEL
GQDYEHVTMLQERFREFARDTGNIGQERVDTVNQLADELINSGHTDAATIAEWKDGLNEA
WADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVETLQRMH
TTFEHDIQALGTQVKTLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRTLLEACDGRRVR
LLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNNS
FTNCIELGKSLLARKHYALEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVHQFGRDA
GVAESWLLGQEPYLSSREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLE
VRRQQEEEERKRNPPPAETQTDDASPQQREGEQVSQNGLPSDQDSPRDNVEESDIVNGVE
EPSPGGSPGEARKVKPSQAATLPPKSQDSDPANQMEGYLHRKHEWEGHNKKASSRSWHNV
YCVINNREMGFYKDHKSASQGIPYHNQIPISLKDAACEVALDYKKKKHVFKLKATDGNEY
LFQANEDEEMNSWMQAISSAASSDKTEMTPSSHSTPTSSRAQTLPASVALATESSPGKRE
KDKEKRFSLFSKKK
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagggcgaccagtatgcctggccccttgtccccagggcatctctctcca
ggggccctgtctccttctgggcctggcccctctctagccaccagccctggccctgatccg
ggctactccgccaaacaggctgctttcaactacaaccagctggagggccgctttaagcag
ctgcaagatgagcgcgaggcggtgcagaagaagaccttcaccaagtgggtcaactcccac
ctagccagagtgtcctgcaggatcactgacctctatatggacctgagggatggacgtatg
ctcatcaaactactggaggtcctctctggggagagactgcccaagcccactaaggggcgc
atgcgtatccactgcctagagaacgtggacaaggccctgcagttcctcaaggagcagagg
gtccatctggagaatatgggctcccacgacattgtcgacggcaaccaccgcctcaccctc
ggcctaatctggaccatcatcctccgcttccagatccaggacatcagagtggagactgag
gacaacaaggagaagaagtctgctaaagatgccctgctgctgtggtgccagatgaagact
gcaggatatcccaacgtgaacattcacaacttcagcaccagctggagagatggcatggct
ttcaacgccatcctccacaaacatagacctgacctgatagactttgacaagctgaagaag
tccaacgcccaccacaatcttcagaatgccttcaacctggcagagcaacacctgggcatc
cacaagctgctggatgtagaggatatcagcgtggaccacccggatgagaagtccgtcatc
acctatgttgtgacctactaccactacttctccaaaatgaaggctctgaaggtggaggga
aaacgtattgggaaggtgctggacaatgccattgagacagataacatgattcagaaatat
gagagtctggcctctgaccttctggaatggattgaacagaccataatcatcctcaacaac
cgcaagtttgccaactccttagtgggtgtgcagcaacagcttcaggccttcaacacctac
cgtaccgtggaaaagccccccaagttcacagagaagggcaacctggaggttctcctcttc
accattcaaagtaagatgagggccaacaatcagaaggtctacatgccacgggatggcaaa
ctcatctcagacatcaacaaggcctgggagaggctggagaagtctgagcatgagagggag
ctggcgctgaggacggagctgattcgtcaggagaaactggagcaactggcccgccgcttc
gaccgcaaggctgccatgagagagacctggctgagtgaaaaccaacgcctcgtctcgcag
gacaactttggcttcgacctgcaggcagtggaggctgccaccaaaaagcacgaggccatt
gagacggacatcggcgcctacgaggagcgtgtgcaggctgtgctctctgtggccaaggag
ctggaggcggagaactaccacgacatcaagcgcgtgactgcgaggaaggacaatgtgctg
cgtctgtgggagtacctgctggagctgctgaaggcccggcgcatccggctggagatgaac
ctgggcctgcagagggtctttcaggagatgctccacatcatggactggatggacgagatg
aagatgctgctgctgtcccaggactatgggaaacacctgctgggagtggaggacctgctg
cagaagcatgctctggtggaggctgatatcgccatccaagccaaccgcgtcaaagccgtc
aacaacaacgctcagaagttcgccatcgacgcagagggctacaagccctgtgacccccag
gtgatccgagaccgcatggcccacatggagttctgttacgcagagctgagccagctggcc
gccgatcgctgcgcccgcctggaggagtcccgccgcctctggaagttcttctgggagatg
gccgaggaggagggctggatccgggagaaggaacagatcctgtcctctgaggactgtggc
aaggacctgactggggccgtgcgcctgctgagccagcatcgcgccttcgaggacgagatg
agcggtcgcgctggccacttgcagcagaccatcaaacagggagaggagctggtggccgcc
gaccacttcggagccgacaagatccgcaaacgcatccaagacatccaggcgcagtgggcg
gccctggaggggctgtctgcagtcaggaaggcccggttggaggaggcctgcaacctgcac
cagttccaggctgacgccgatgacatcgacgcctggatgctggatgttctccgcatcgtg
tccagtgctgacgttggccatgacgagttctccacccaggccctggtcaagaagcacaag
gacgtggctgaggagatcaccagctaccgaccagtcatcgacgctctgcacgagcagtcc
aaaaccctacccaaggagcaaactggctcagaggaggtgcaggggcgcctggcaggcatt
gaagagcgctacaaggaggtggctgagctgacccggctgaggaaacaggccctgcaggat
gccctggccctctataagatgttcaacgaggcggccgcctgtgaggtgtggatcgatgag
aaggagcagtggctcaacagtatggagataccagagaaactggaagatctggaagtggtt
cagcacaggtttgagagtctggagccagagatgaacaaccaagcatcccgcgttgccgtg
gtgaaccagattgctaggcaactcatccacaacggtcacccgagtgagaaggagatcaaa
gcccaacaggacaaactcaacaccagatggagccagttccgtgacctagttgacctgaag
aaagactccctcaactcagctctgggcgtgcagaactaccacctggagtgcaatgaaacc
aagtcgtggatccgtgagaagaccaaggttatcgagtccacccaggagctgggcaacgat
cttgccggggttatggccctacagcgcaaactcaccggcatggagcgtgacttggctgcc
atcgaggacaagctgggagaactggggaaggagggggagtgcctggcgactgagcaccct
gaccaggcccagggcatcatgggtcgtctgggggagatcacaggggtgtgggatgagatg
aagggcaccttgaagaatcgcgaggagtctcttggcgaggccagcaagctgcagcagttc
ttccgggagctggatgacttccaatcatggctgtccaagacccagacggccatcgcctca
gatgacatgcccaacacactgacggaggcagagaagcttctggcgcagcatgagggcatc
aagaacgagatccgcaactacgaggaggactaccagaagatgagggacatgggcgagatg
gtgacccagggccagacggacgcccagtacatgttcctgaggcagaggctgcaggccctc
gacacgggctggaatgagctgcacaagatgtgggagaaccgtcagaacctactgtcccag
tcccatgcccaccagctgttcctcagggacaccaagcaggctgaggccttcctcaacaac
caggagtatgtgctggcccatacagagatgcccaggactctggagggggcggagggagcc
attaagaagcaggaggacttcatgaccaccatggacgccaacgaggagaagatcaaagct
gtggtggacaccggacgcaggctggtcagcgatggaaatgtcaacgctgaccgcatccag
gagaaagtggactctatcgatgagagacataagaagaaccgcatgatggccagtgagctt
ctctgtaagctgaaggataacagagacctgcagaagttcctccaggactgccaagagctc
tccctgtggatcaatgagaagatgctcacagctcaggacatgtcgtacgacgaagccaga
aacctccacagcaaatggctcaaacaccaggctttcatggccgagctgcagtccaacaag
gagtggctggacaagatcgagaaggatggaatgcagctgatagctgagaagccggagacc
gagtccatggtgaaggaaaagctggcagcgctccataagatgtgggatgacctggagtcc
accacccagaccaaggccaagtgtctgtttgatgccaacaaggccgagctgttcacccag
agctgtgccgacctggacaagtggctggtaggagtggatggacagatccagtcagacgac
tacggcaaagatctgaccagtgtcaacatcctgctcaagaaacaacagatgctggagagc
caggtggaggtgcgtcagaaggaggtggaggagctgcagagccaggcccaggtcctcagc
caggaggggaaggatacggacgaggtggacggccagcgccgcattgtggagaagaagttc
cagcagctgctggaccctctacggaagaggaagggaaacctcatggcctcccgcgagatc
caccagttcaacagagacatggaggatgagatcctctgggttgaagagcgaatgccactt
gcaatatcaacagaccacggaaacaacctgcaaacagtccagttactcatcaagaaaaac
cagaccctgcagaaggagatccagggccaccagccccgttgtgatgacatctttgagcgg
agcttgcaggtcctcaaggatgatgacgacagcctcagcggcgaggagatcaaccagcgg
gtggccgacctgcggcgcctgtgggcccagattctggaggagacgggcaaacgccatgga
cgcctggaggaggcccacatggcccaacagtactactttgatgctgctgaagccgaggcc
tggatgagcgagcaggagctctacatgatgtcagaggagaaagccaaggatgagcagagc
tctgtggccatgttgaagaagcaccagatactggagcaggctgtggaagactatgctgaa
actgtccaccagctgtcccagacaagtagaggcctgactgccgccggacaccctgaaagt
gagcggatcggcatgcgtcagtcccaggtggataagctgtacgcagggctcaaggacctg
tcggaggagaggagggggaagctggacgagaggttccgtctgttccagctcaacagggag
gtggatgacctggagcagtggatcgctgaaagggaagtagtggctgggtcacatgagctg
ggacaggactacgaacatgtcacgatgcttcaggagcgtttccgtgagtttgctcgcgac
acgggcaacatcggtcaggagcgtgtggacaccgtcaaccagttggcggatgagctcatc
aactcaggccacaccgacgcggcaacaatcgcggagtggaaggatgggctgaatgaagcg
tgggccgacctgctggagctaatcgacacacgcacgcagatcctggcggcttcctttgag
ctgcataagttctaccatgatgccaaggagatcctcaaccgcatcctggacaaacacaag
aagctgcctgaggagctgggccgagaccagaacacagtggagaccctgcagaggatgcac
accacctttgaacacgacatccaggccctggggacacaggtgaagacgttgcaggaggat
gctgtgcgtctgcagtctgcctacgccggagacaaggcagatgacatccaaaagagagag
ggtgaggtgctggaggcctggaggaccctgctggaggcctgcgacggccgcagggtcaga
ctgctcgacaccggcgacaagttccgcttcttcagcatggtgcgagacctcatgctctgg
atggaggacgtcatccgcctcatcgaggctcaggagaagcccagggacgtgtcgtccgtg
gagctcctgatgaacaaccaccaaggcatcaaggctgagatcgacgcccgcaacaacagc
ttcaccaactgcatcgagctgggcaagtccctgttggcaaggaaacactacgcattagag
gagatcaaagagaagttactacagttgacagacaaaaggaaagacatgattgacaagtgg
gaagacagatgggagtggctaagattggttctggaggtgcaccagtttggtagggatgcg
ggtgtggctgagtcatggctgctgggacaggagccgtacttgtccagcagggagatgggg
cagaacgtggacgaggtggagaaactcatcaagagacacgaggcctttgagaagtccgct
gccacctgggaggagcgcttctcagcgctggaacggctgactacgatggaattactggaa
gtgagaagacagcaagaggaggaagagaggaagaggaatccgccacctgcagagacccag
acggacgatgcatcgccacagcagagggagggtgagcaggtgtctcagaacggactgcca
tcggaccaggactcccctcgggataacgtagaggaaagtgacatcgttaatggggtggag
gagcccagcccaggtgggtcgcccggtgaagcacgcaaggtcaagcccagccaggctgcc
acactcccgcccaagtcccaggactcagacccagccaaccagatggaaggctacctgcac
cgcaaacacgagtgggagggtcacaacaagaaggcatccagcagatcctggcacaatgtg
tattgcgtgatcaacaaccgggagatgggcttctacaaagaccataagagtgccagccag
gggatcccttaccacaaccagatccccatcagcctgaaggatgctgcgtgtgaggtcgcc
ctcgactacaagaagaagaaacatgtgttcaaactgaaagctacagatggcaatgagtat
ctcttccaagccaacgaggatgaggagatgaactcgtggatgcaagccatctccagcgct
gcgtcctctgataagaccgagatgacccccagcagccatagcacccccacctccagccga
gcccagaccctgcctgcctccgtcgccctggcaactgagtccagccctggcaagcgtgag
aaggacaaagaaaagcgcttcagccttttcagcaaaaagaaatag
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integrated database retrieval system
