Oncorhynchus gorbuscha (pink salmon): 124041172
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Entry
124041172 CDS
T07892
Name
(RefSeq) girdin-like isoform X1
KO
K25392
girdin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124041172
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124041172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
GAS
DUF4472
Motif
Other DBs
NCBI-GeneID:
124041172
NCBI-ProteinID:
XP_046214389
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All DBs
Position
LG08:complement(9443137..9524967)
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AA seq
2020 aa
AA seq
DB search
MGSEVFTPLLEQFLLTPLVAWVKAAGHSSGNDGTKLSEYIELVDGIYLNEIMLEINPKAT
VQRTNKKVNNDSTLRIQNLSILIRQIKSYYQETLQQLVMMPLPNVLVLGRNPLSEQGLEE
MRKLLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLDGGE
LPPEDLDSFSRNMAFHLKRIVDERDDQLETIVELTQERDCGLYSPQPFCAQSPNDSPSMR
RTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDCRQELDNMETENKRVQQESLQLLSD
ARSARAYRDELDALREKAVRVDKLESEVGRYKERLYDIEFYKARVEELKEDNQVLLETKA
MLEDQLEGTRARSDKLHELEKESLQLKSKIHDMEMDRDMDRKRIEELLEENLVLEMAQKQ
SMDESLHLGWELQQLSMTPDLTEVPQKSLGHEVNELTSSRLLKLEKENQTLLKTVEELRG
SASKHVPARLLKADKENQRLTQRLVQLESELNTERESLHSAEHLGTDLMKEKALLEKTLE
TLRENSERQVKGLEQENEHLTNTVSSLRQRSQVGPEARVKDVEKENRVLHESIRETSSKL
NKLEFERKQLRKDLAVYKEKGERTEELEVEAQRLERANEALQKRVASLGITCDKVASLEK
ENAELEAEGRRLKKNVEGLRSTSFQLEALEKENTQLDEENLKLRRAAEVLRSAGNKAAQL
ELENRELESERSQLKRSLELLKASSRKTERLEVSYQGLDTENQRLQKSLENSSRKIQQLE
GELQDVEQENQSLQRSLEELKISSKRLEQLEQENKTLEQESSQLEKDKKQLEKENKRLRQ
QAEIRDSKLDEDNLRISHLEKENRSLGKEMTSFKDSCNRLKDLEKENKELVKQATIDKKT
LVTLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLQAEQSSDDDRYKLLEFKLES
TLKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEEERMVQSSPP
RGGDREDSQAVNKWEKESHETTRELLKVKDRLIEVERNNATLQAEKQALHTNLKQIENQS
SNLQAQILALQRQTASLQENNTTLQTQNAKLQVENSTLNSQSGALMAQNAQLATQQSSTE
NEKEGAMRDREDLRSTYEMLLRDHEKLAALHERQASEYEGLIGKHGGLKSSHKSLESQHR
DLEDRYNQLLRQKDQLEELEKQLKSEQEKMLSENKSHEATAADYHKLKEENERLNMAHRQ
LVKDNEGLQADHKNLKSQMNGAKLEQTRMEAEFSKLKEQYQQLDITSTKLTNQCELLSQL
KGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEK
IMDQYKFYDPSPPRRRGNWITLKMKKLIKPRSRERMRSLTLTPTRSESSEGFLGLPLDSQ
DSSSIGSGSNSLDDTLTHKRSSTLKRLPFMRTRSKEKDKEKAIYRRSMSMNDLLQTMALA
GGQWAGSTENLEAPVETNGGSGARRMKGLGSMAYSTNAINYTTLTLPSGSRAKRSLKIKD
NASCEDVPASSDDPIGVKGQASRPSSLHSIKNISSNSNNNSHFSPLQTKGTLNGNLSRPH
SESSGEFSLSLDQEEWSSGSSPVQQPLSRSSHQSPMLLRRSLDPQARKKTSNSLGSASEV
VSLQQFLEESTDPAESGSQENLTVESPRLSGGAEHVQRDRAERGSTSCTGTKGRGILRSA
SGKAAPVHSDSRPPRGGQPGRPSLRKAESTRVKGTVQPRVGLSSQSKAMSVSERLDISST
SFSTLPRASSVISTAEGSTRRTSIHDLLSKDARQPVSVDHSPSSKASPRASTTPSEYPPT
SNPSQHPNHQSIPLDPALVPLSLPKSVSMPCTGSQQPPNSKETDLSSLESFFGKSFTVES
VFMDSIFSEPTFTGAKSHTFLSLNTSLVSNISGPPGKTHPQPNSVQTAQNQPNGQKSCPP
DQNGEQEVIDTNHVLDADQSASQPLSPEDQQSLWYEYGCV
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgaggtttttacgccgttgctggagcaatttctgctcacgcctttggtcgcc
tgggttaaggcggctgggcattcatctggaaacgatggcaccaaactatcggaatacatt
gaattagtggatggcatttatttaaacgagatcatgcttgagataaatcctaaagccact
gttcaaagaaccaacaagaaggtgaacaatgactcaacactgcgcatacaaaacctctcc
atcctgatccgacagatcaagtcctattaccaggagaccctccagcagctggtgatgatg
cctctccccaatgtgctggtgctgggcaggaaccctctcagtgagcaaggactggaggag
atgaggaagcttttgttgctgttgcttggctgtgccgtccagtgtgagaagaaagaggag
tacatcgagaggatccagaccttagactttgacacaaaagctgccatagcatctcacatc
caagaggtgacccacaaccaggagaatgttgtggacctgcagtggctggatgggggcgag
ctgcccccagaggacctggactccttctccaggaacatggccttccatctcaaacgcata
gtggacgagagagacgatcagctggagaccattgtggagctgacccaggagagggactgt
ggactgtactctccccagccgttctgtgcccagtcgcccaacgactcgcccagcatgcgc
cgcacagagagccggcaacacctgtctgtggagctggccgacgccaaggccaagatcaga
cgtctgcgccaggagctggaggagaagagtgagcagctgctggactgcagacaggaactg
gacaacatggagactgaaaataagagggttcagcaagagagcctgcagttgttgtcggac
gcccgttctgccagggcatatcgtgacgaactggacgctctgagggagaaggccgtcaga
gtggacaagctggagagtgaagtgggacgctacaaggagaggctctacgacattgagttc
tacaaagccagagtagaggagctgaaggaggacaaccaggttctgctggagaccaaggcc
atgctagaggaccagctggaaggaaccagggctcgctctgacaaactccacgagctggag
aaagagagcctgcagctcaaatccaagatccacgacatggaaatggaccgggacatggac
aggaagcgtattgaggagctgctagaggagaacctggtcctagagatggcccagaaacag
agcatggacgagtctctccacctggggtgggaactacagcagctctccatgacccctgac
ctgacagaggtgcctcagaagtccctgggccacgaggtgaatgagctgacatccagccgg
ctactgaagctggagaaggagaaccagaccctgctgaagactgtggaggagctgagaggt
tctgccagcaaacacgtccctgcacgtctcctcaaggccgacaaggagaaccagaggctc
acccagaggctggtgcagctggagagtgagctgaacacagaaagggagagtctgcacagt
gcagagcatcttggcaccgacctgatgaaggagaaggctctgttggagaaaaccctggag
acgctgagggagaattcagagagacaggtgaaaggcctggagcaggagaacgagcatctg
accaataccgtctcgtcgctgaggcaacgctcccaggtgggccctgaggcgcgggtcaaa
gacgtggagaaggagaaccgcgtgctgcacgagtccatccgggagaccagctccaagctc
aacaagctggagtttgagcgtaagcagctgcgtaaggacctggcggtgtacaaggagaag
ggcgagaggacagaggagctggaggtggaggcgcagcggctggagagggcgaacgaggcc
ctgcagaagcgagtagccagcctgggcatcacctgtgacaaggtggcgtctctggagaag
gagaacgcagagcttgaggcagagggccgtcgtttgaagaagaatgtggaaggcctgcgg
agcacctccttccagctggaggccctggagaaggagaatacccagctggacgaggagaac
ctgaagctccgcagggctgcagaggtgctccgctcggccgggaacaaggcggctcagctg
gaactggagaaccgggagctggagagcgagaggagccagctgaagagaagcctggagctg
ctcaaagcctcctctaggaagacggagaggctggaggtgagctaccagggcctggacacg
gagaaccagcggctgcagaaatccctagagaacagcagccgcaagatccagcagctagag
ggggagctgcaggacgtagaacaggagaaccagagtctgcagaggagcctggaggaactg
aagatctccagcaaacgtctggagcagctggagcaggagaataagactctggagcaggag
agctctcagctggagaaggacaagaagcagctggagaaggaaaacaagaggctgagacag
caggcggagatcagggactccaagctggacgaggacaacctgaggatcagccacctggag
aaggagaaccgctcactgggcaaggagatgacctccttcaaggactcctgcaaccgcctt
aaagacctggagaaggagaacaaagagctggtcaaacaggccactatagataagaagacc
ctggtcactctgcgagaggaactggtgagtgagaaactgcggacgcagcagatgaacaat
gatcttgagaaactgacccacgagctggagaagataggccttaacaaggagaggttgctg
caggccgagcagagctctgacgacgacaggtacaagctgctggagttcaagctagagtcc
actctcaagtcttctctggagatcaaggaggagaagatagctgccttggaggccaggctg
caggagtcctctaacctcaaccaacaactgcgccaggagcttaaaacggtgaagaagaac
tatgaggccctgcgacagagggaggaggaggaggagaggatggtgcagagctcacccccc
agaggaggggacagggaggactctcaggccgtcaacaagtgggagaaggagagccacgag
accacccgggaactgctcaaggtcaaagaccgcctcattgaggtggagaggaacaatgcc
acgctccaggcagagaagcaggccctgcataccaacctgaagcagatagagaaccagagc
agtaacctgcaggcccagattctggctctgcagagacagactgcatctctacaggagaac
aacaccacactacagacccagaacgccaaactacaggttgagaactcaacgctgaactcc
cagagtggcgctctcatggcccagaatgcccaactggcgacgcagcagtccagtacggag
aacgagaaggagggggcgatgagggacagggaagacctgaggtccacctatgagatgctg
ctaagggaccatgagaaactggctgccctgcatgagagacaggcctccgagtacgagggc
ctcatcggcaaacatggaggcctgaaaagttcccacaagagtctagagtcacagcacaga
gacctggaggacaggtataaccagctgctgaggcagaaggatcagctggaggagctggag
aaacagctgaagtcagagcaggagaagatgctgtctgagaacaagagccacgaggccacg
gctgcagactaccacaaactgaaggaggagaatgaaaggctgaacatggcacaccgtcag
ctggtgaaggacaatgagggcctgcaggccgaccataagaacctgaagagccagatgaac
ggtgccaagctggaacagacccgcatggaggcggagttctccaaactcaaagagcagtac
cagcagctggacatcacctccaccaagctcactaaccagtgtgagttgctgagtcagttg
aaagggaacctggaggaggagaaccgtcacctgctggaccagatccagaccctgatgctg
cagaaccgcaccctgctagaacagaccatggagagcaaggacctgttccacgtagagcag
agacagtacatagacaagctgaacgagttgaggagacagaaggagaagctggaggagaag
atcatggatcagtataagttctacgacccctcacctccacggagacgggggaattggatc
accctgaagatgaagaagctgatcaagccgaggagtcgggagcggatgcgttccctgaca
ctgactcccacgcgctccgagtccagcgagggcttcctggggcttcctctggacagccag
gactcctcctccataggctctggctccaactccctggacgacacgctgacacacaagagg
agcagcactctgaaaaggttgccctttatgaggaccagatcgaaggagaaagacaaagag
aaggccatctaccgccggtccatgtctatgaacgacttgctacagaccatggcgctggcg
gggggtcagtgggcaggcagcacagagaacctggaggcgcccgtcgagaccaacgggggc
agcggtgcccggcgaatgaaagggctgggttccatggcctactccaccaacgctatcaac
tacaccacactcaccctgccttcaggcagcagggccaagaggagcctgaagatcaaagac
aacgcttcctgtgaagatgttccagcatcctcagacgaccccattggggtcaaagggcaa
gcctccagaccctccagcctccatagtatcaagaacatcagtagtaatagcaataataac
tcccacttctctccactccagaccaaaggcacattgaacggaaacctcagcaggccccac
agtgagagcagtggggagttcagcctcagtctggaccaggaggagtggtccagcgggagc
agccctgtccagcagcccctgtcccgctcctctcaccagagccccatgctgctgcggagg
tccctggacccccaggccaggaagaagacgagcaactccttgggcagcgccagtgaagtg
gtctctctacagcagttcctagaggagagcaccgaccctgcagagtctggcagccaagag
aatctgaccgttgagtctccccgcctctctggaggcgctgagcatgtgcagagggaccgg
gctgagcgaggctccacctcctgcaccggcactaaggggcggggcatcctgcgctcagcc
agtgggaaggcagcgccagtgcactcagacagccgccccccaaggggtggccaaccaggt
cgtcccagtctacggaaggcagagagtacgcgtgtgaagggcacggtccagccccgggtc
ggcctctcctcccagagtaaagccatgtctgtgtctgagcgtctggacatctcctccacc
tccttctccacgctgccccgggccagcagcgtcatctccacagctgagggctccacgcgt
cggaccagcatacacgacctgctgtccaaagacgcccggcagcccgtgtctgtggaccac
tcaccctcctcaaaggcctcgcctcgcgcctccaccacgcccagtgagtaccccccaacc
agtaacccctcacaacaccccaatcaccagtccatccccctagacccagccctcgtgccc
ctgtccctgcccaagtcagtcagtatgccctgcacgggcagtcagcaaccccccaatagt
aaggaaactgatctctctagcctggagtccttctttggaaagtccttcacagtagagtca
gtgtttatggactccatcttcagcgagccaaccttcacaggggccaagagccataccttc
ctctccctcaacacctccctggtcagtaacatcagtggtcccccaggcaaaacccacccc
cagcccaactctgttcaaactgcccagaaccaaccaaatgggcaaaagtcctgcccacct
gaccagaatggggaacaggaggtaattgacaccaatcatgtgctcgatgctgaccaatcc
gcatcccaaccccttagcccagaggaccaacaatcattgtggtatgagtatggctgtgtc
tga
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