Oncorhynchus gorbuscha (pink salmon): 124041239
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Entry
124041239 CDS
T07892
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015
mRNA surveillance pathway
ogo04261
Adrenergic signaling in cardiomyocytes
ogo04382
Cornified envelope formation
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124041239
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124041239
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124041239
09158 Development and regeneration
04382 Cornified envelope formation
124041239
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124041239
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124041239
03036 Chromosome and associated proteins [BR:
ogo03036
]
124041239
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124041239
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124041239
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124041239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
124041239
NCBI-ProteinID:
XP_046214553
LinkDB
All DBs
Position
LG08:14927589..14932435
Genome browser
AA seq
447 aa
AA seq
DB search
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNHSGELLATGDKGGRVVIFQHEQE
CKNRLNLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNSAHFLLSTNDKTIK
LWKIGERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRVFANAHTYHI
NSISVNSDHQTYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPNQCN
VFVYSSSKGTIRLCDMRTAALCDSHTKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRKDITLEASRESSKPRATLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKENVIAVAATNNLYIFQDKIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttgccggtggaaatgattttcagtggtgtttctcacaagtgaaaggggcg
atagatgaagatgttgcagaagctgatatcatctcaacggttgaattcaaccattctgga
gagttgctagcaactggagacaagggaggcagagttgtcatatttcaacatgaacaggag
tgtaaaaatcgactaaacctgcgaggggaatacaatgtttatagcacttttcagagtcac
gaaccggaatttgactacttgaaaagtttagaaattgaggaaaaaattaacaaaataaga
tggttaccccaacaaaactcagctcactttctactctcaacaaatgataaaacgatcaaa
ttgtggaaaatcggtgaacgagacaagcgggctgagggttacaacttgaaagacgaagac
ggacgtctcagggatccctttagaattacttccctacgggtaccagtgctgatgcccatg
gatctcatggtagaagcaagtcctcgtagggtgtttgccaacgctcacacatatcatatt
aattcaatttctgtaaatagcgatcatcaaacatacctctccgcggatgatctaagaatt
aatctatggcacttggaaatcacagaccgaagttttaacattgtagacatcaagcctgcc
aacatggaggaactgacagaggtgatcacagcggctgagtgccatccaaaccaatgcaat
gtatttgtgtacagcagtagcaaaggcaccatacgcctctgtgacatgcgaacagcagca
ctctgcgatagccacaccaagttctttgaggagcctgaggatccaagcagcaggtcattt
ttctctgagatcatctcgtccatctctgacgtgaagttcagtcacagcgggcgctacatg
atgacacgggactacctctccgtcaaggtgtgggacctcaacatggagaacaggccagtc
gagacatatcaggttcatgaataccttcgcagcaagctttgctcgttatatgaaaatgat
tgcatcttcgacaagtttgagtgctgctggaacggtagcgacagtgccatcatgaccggc
tcctacaacaactttttccgtatgttcgaccgcaacaccaggaaggacatcacactggag
gcctctagggagagcagcaaaccgcgggctacactcaaaccccgcaaagtctccaccggt
ggcaagaggaagaaagatgaaattagcgtggacagcctggacttcaacaagaagatcttg
cacaccgcctggcaccccaaagaaaatgtcatcgctgtggcggccaccaacaacctgtac
attttccaggacaagatcaactaa
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