KEGG   Oncorhynchus gorbuscha (pink salmon): 124041249
Entry
124041249         CDS       T07892                                 
Symbol
cfap43
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 43
  KO
K24223  cilia- and flagella-associated protein 43
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ogo03037]
    124041249 (cfap43)
Cilium and associated proteins [BR:ogo03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   124041249 (cfap43)
SSDB
Motif
Pfam: CC_Cfap43 Beta-prop_THOC3 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st WDR55 Beta-prop_EML WD40_Prp19 WD40 Beta-prop_WDR3_2nd Beta-prop_HPS5 CFAP43_N Beta-prop_ACSF4 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_VPS8
Other DBs
NCBI-GeneID: 124041249
NCBI-ProteinID: XP_046214574
LinkDB
Position
LG08:complement(15571563..15588964)
AA seq 1685 aa
MLAVSCLAQLSLFSTFPEMDLLGNLEVRWAQGLTSQNVEFVDKKTACYICGNYIVFLNIE
TKIRSVLQCPGRGIGAFTANGHCRTLAFSNHKLNPSIFVYNYPELILKNELKGTARVDYT
SLALSDAGPYLACCSSIPDHTITVWNWETGDPICNQPQAGKDITSLVFNPMNWLQICSLS
ASSSLTVWTIEKSDSFHIMKPGVIDLPATDGCLVEREINPSHVPTGILTYFGPQMPNSAI
AGLAEDRAETFVPKERIKTRLRPSTICWTASSELYVGCQEGHLLQVDPDSLAVSVLFNPS
AADDIPGFQQGSFQSLALHKDGLFVSGKENVLRCLKIKGNQVEVTQTWTLEEPATTIIYS
PDYETLLLASSTGRIYRYKRSQCEKVVKVLDVLSGDFVAAASLYTDNNLCVSVRDSGELQ
LWSLDAGFCIGSISLQVKVTSLACCPIAQYVAVGTVSGHVLFIELTREQQPRLVHRVHLY
YTPVDHLLFDQGGNFLITGASDANIYVLNARASRVFEVIGYTGAKGAIVSLSTQYSRDIK
QVKLLALCAGEKDIGRGEGSLLTLLTLPVQELTGAGVCADLRGCLSNNVLQRCTYEVPHP
LSSSALGANKIFGYCQKRKALQRFQLPESTERSSDQDVVQLTPEKEVEGHPMGPASVLLS
PHQSWLASVGQDGLLRIREISSLDRYVQMQCHSCWLGGVRTVSFTSDSQTMITTGLKDGS
MVCTRLRLKMAGVGKANAATQYSQSIAKYQESVITSENPILSRMADWDPEALSPPGSADL
HREEANDKRQIVDVTEQDESSTNLPSATASDSTWLDNKLEAVINEEIQQFSQTKKSLRKN
VKQLRDTIQAMMRENETLPDMEKLEQQEFNLDVDEQKRLQAEGEQEVTRVRNEIELENLA
KCYLRDVLKRECWDSMKVKGQAIKAFHTEHEVKNYPMKERTQQELDELHRVESMRKIERA
DSNLQQEILEKKTKTTTEEEEEEEGREMESASLTGSLSAQYGGSNPYLYNQFNLHIREQK
INQITLLQDVIYKVKTAFNTDFKGVHKQKEQEINRVKDKNRRIMEIMSELDHKMKLWEPS
LSDNERPERALSVEDSEIHFEKYLTPEQRKKEEEKKKEEEQRRQTAKSDNIRERALDEMM
GGVLELKKEDILRVEVPQPEFIVSKPDIQWTEEEKKIYKEYEKKAKELSEEQEKYRKTLE
AEMNKLQTSIMDSTQGFDETLTKLFERKVKSEMVIYQEELKITNLVHSILIEEEVLNRER
ELSLKLEKNRVYKNEIGEELKKHKEDVEMFRETYDNVVAEDKLLDRGFRKEFFDVPGHLV
DQLYKLYKRRPRVQRMRTQADNSTSPFKERPLPGPVAAEGLCQMMKAMEELDAPENIPPE
SLDVSVWERFCLARRAKVESEQQVKVKALTLAEMQAFLQKRTDEDESARLEMKSLMDDIN
GLREEKMRFRLDIMVQILIKQGQVEVENGDFIADYSDSLLLHKSVVEDLNGTIRALGEQK
IASMVECKDFRKGIIQQEWEHKRMRMQKEDLNNKARDIQMLRVSQELQEYLSETDHDNRI
SKQVSTLEKTITLQEKTHLKNVLTCKKLIKQLNRQAAKKASKNSALDEQLTNMQVTVAER
RHICEAIAMEENHERDAEERYQEIIQRKKLVELARAQAEEVATLRAEVERMRMKSFPALA
QLNHN
NT seq 5058 nt   +upstreamnt  +downstreamnt
atgctagctgttagttgtcttgcacagctcagtttattcagtacatttccagaaatggat
ctattgggaaatttagaagtcaggtgggctcagggtttgacaagccaaaatgttgaattt
gttgacaagaaaacagcctgctacatttgtgggaattacatagttttcctgaatatagag
acgaaaattagaagtgtgctacagtgtcctggtcgaggtattggtgccttcacagcaaat
ggacattgcaggacacttgcattctccaaccataaactaaatccctccatatttgtgtac
aactaccctgaacttattctgaagaatgaactgaagggaacagcccgtgtagactacaca
tctctggcactaagtgatgctggtccttatttggcctgctgctcatcaataccagaccac
accataacagtatggaactgggaaactggggatccaatttgtaaccaaccacaagctgga
aaagacatcacctctttggtgtttaacccaatgaactggctccagatttgctctttgagt
gcatcatcatcccttacagtttggaccattgagaagagtgacagctttcacataatgaaa
ccaggtgtgatagatctccctgcgactgatggctgtctggttgagagggagattaacccc
tctcatgtccccactggaatactcacctacttcggacctcagatgcccaactcagccatc
gcagggcttgcagaagacagggcagaaacctttgtgcccaaagagcgcataaagaccagg
ctaagacctagcaccatctgttggacagcctcatcagagctctatgtgggctgccaggaa
ggccacctgctacaggttgacccagactctctggctgtctctgtcctcttcaacccctca
gctgcagatgacattcctgggttccagcagggtagcttccagagcttagccctgcacaag
gatggactatttgtgtcaggaaaggagaatgtgctacgctgcttaaaaattaaggggaac
caagtggaggttacacaaacttggacattggaggaaccagccacaaccataatatattca
ccagactatgaaacactgctcttagcttccagtacagggcgcatctacaggtataaacga
tcccagtgcgagaaggtggtgaaagtcctggacgttctcagtggagactttgtggcagca
gcttcactgtatactgataataacttatgtgtgtcagtgagggactcgggagagttgcag
ctgtggtctctagatgctggcttctgcatcggctctatatctcttcaagtaaaggtgacc
agtttggcctgctgtccgattgctcaatacgttgccgtgggaacagtgtcggggcatgtc
ctgttcattgagctgaccagggagcagcagcctcgtctggtgcacagggttcacctctac
tacacccctgtggaccacctactatttgatcaaggaggaaacttccttatcactggtgcc
tcggatgcaaatatatatgtgttaaatgcaagggcttccagagtatttgaggtaatcggt
tacacaggtgctaaaggagccatcgtgtccctgtctacccagtacagccgggatattaag
caggtcaaactgctggctctgtgtgctggagagaaggacataggccgaggggagggaagt
ctgcttacactgctcactctgcctgtgcaggagcttacgggggcaggagtgtgtgcagac
ctgagaggatgtctttccaataatgtcctacagcggtgcacatatgaggtccctcaccca
ctcagctcctctgccctgggagccaataagatctttggctactgccaaaagaggaaagct
ctccagagattccagctacctgagagcacagaaaggtcctctgaccaggacgtggtccag
ttgaccccagagaaggaggtggagggtcaccctatgggccccgcctccgtcctcctgtcg
ccccaccagtcttggctggcctcagtgggccaagacggactgctgcgcatccgggagatc
tccagtctggaccggtatgttcagatgcagtgccactcatgttggctgggaggggtgagg
acagtgtcctttacctcagacagtcagacaatgatcactacaggcctgaaagacggctct
atggtctgtacaagactaaggctgaaaatggcaggtgttggcaaagcgaatgcagctaca
cagtacagccagtctatagccaaataccaggagagtgtgataacatcagagaaccctatt
ctcagtaggatggctgactgggacccagaggccctgtcccctcctgggtcagcagatcta
cacagagaagaggccaatgataagcgacagatagttgatgtgacggaacaggatgagagc
tccaccaacctgccctcagccacagcctcagactccacctggctggacaacaagctggaa
gcggttatcaatgaggagatccagcagttttcacagacaaagaaaagcctgaggaaaaat
gtcaaacaattgcgtgacacaatccaggcaatgatgcgtgagaacgagacgctgcctgac
atggagaagctggagcagcaggagttcaacctggatgtagatgagcaaaagagactgcaa
gccgagggggagcaggaggtcaccagggtccgaaatgagattgagttggagaacctagcc
aagtgctacctgcgtgacgtccttaagagagaatgctgggattccatgaaggtcaaaggg
caagctatcaaggccttccacactgaacacgaggtgaagaactaccccatgaaggagcgg
acacagcaggagctggatgaacttcatagagtggagagtatgaggaagattgaacgggct
gacagtaatctccagcaggagattctagagaagaagaccaagaccaccacggaagaagag
gaggaggaggaaggccgtgagatggagagtgcttccctcacaggtagcctcagtgcccag
tatggaggctcaaacccctacctctacaatcagttcaacctgcacatcagagagcagaag
atcaaccagatcactttgctacaggatgtcatctacaaagtgaagacagcctttaacaca
gactttaagggggtgcacaagcagaaggagcaggagatcaatcgagtgaaagataagaat
cgtcgcatcatggagatcatgtcagagctggaccacaagatgaagctgtgggagcccagt
ctgtctgacaacgagcggccagagagggcactgtctgtggaggactctgagattcatttt
gaaaagtacctcaccccagagcagagaaaaaaagaggaggagaagaagaaagaggaggaa
caaagacggcagacggccaagagtgacaatatcagagagcgagctctggatgaaatgatg
ggtggagtactcgagctaaaaaaagaggacatcttgagagtggaggtgcctcagcctgag
ttcattgtatccaaaccggacattcagtggacagaggaagagaaaaagatctataaagag
tatgagaagaaagccaaagaactgagcgaggaacaggagaagtacagaaagactctggaa
gctgaaatgaataaactacagacttccatcatggactccactcaggggtttgatgaaacc
ttgaccaagctctttgagaggaaggtgaaatctgagatggttatataccaggaagagctg
aagattacaaatctagttcactccattctgatagaggaggaggttctcaatagagagcga
gaactcagtctcaaactagaaaaaaacagggtctataagaatgagattggagaagagctt
aagaagcacaaagaggatgtagaaatgttccgggagacctacgacaatgttgtggccgag
gacaaacttctcgacaggggattcaggaaggagttctttgatgtcccaggccatcttgtt
gatcagctgtacaaactatacaagcgcagacccagggtccagaggatgaggacccaggca
gacaacagtaccagcccctttaaagagcggcccctaccgggcccagtggcagcagagggt
ctctgtcagatgatgaaggccatggaggagctggacgctccagagaacatacctcctgaa
agcctagacgtgtctgtgtgggagaggttctgcctggcccgcagagccaaagttgagagt
gagcagcaggtgaaagttaaggctttgactctggctgaaatgcaagcctttctgcagaag
aggaccgatgaggatgagagtgcaagactggaaatgaaaagtctcatggatgacatcaat
gggctacgagaggagaagatgcgtttccgcctggacatcatggttcagatcctgatcaag
cagggccaggtggaggtggagaacggagacttcattgcggactactctgactctctgctg
ctccataagagtgtggtggaggacctcaacgggaccatcagagctctgggagagcagaag
atagccagcatggtggagtgcaaggacttccgtaaaggtatcatccagcaggagtgggag
cacaagaggatgaggatgcagaaggaggacctgaacaacaaagccagggacatccagatg
ctgcgcgtctctcaggagctgcaggagtatctcagtgagacggatcatgacaaccgcata
tcaaagcaggtttcaactctggagaaaaccataacattacaggaaaagactcacctaaag
aatgtgctgacctgtaagaagttgatcaagcagctgaacagacaggcagcaaagaaggca
tcgaagaattctgctctggatgagcagctgaccaacatgcaagtgactgtggctgagagg
agacacatctgtgaagccatagccatggaggagaaccatgagcgtgatgcagaggagagg
taccaggagatcatccagaggaagaagctggtggagctagccagggcccaggctgaggag
gtggctaccctcagggcagaggtggaacgcatgagaatgaagtccttccccgctctcgct
cagctaaaccataactga

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