Oncorhynchus gorbuscha (pink salmon): 124041287
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Entry
124041287 CDS
T07892
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124041287 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogo03009
]
124041287 (nvl)
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124041287 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
AAA_28
Mg_chelatase
RNA_helicase
nSTAND3
AAA_17
AAA_18
Rad17
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
Vps4_C
Zeta_toxin
TsaE
AAA_3
Sigma54_activ_2
Cytidylate_kin2
Motif
Other DBs
NCBI-GeneID:
124041287
NCBI-ProteinID:
XP_046214652
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All DBs
Position
LG08:complement(19264559..19275418)
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AA seq
888 aa
AA seq
DB search
MNNRRCGVDNRLKQRVEQYLSNQSGQYVDITSMAHDLQRLYRMDYGRRNKTAFRIQVEKV
HGVICDESGLNDLENKHLAKRARHTDKDAGDGSSNLDDTTDSDEDLPEQPPINLMNNSLM
SLYKKGNPESGASPRRDKSASDSPAPEAHSTPQSVGTKVSAGGWFIDKGRGLEHDSILID
LCEEEAASPAGNKQTDASMLEPEKTPKKGTFKKSKRQKEGASKGNDGDIEASIMNKKART
KSIELQYSTLKFEDVGGNEDTLTEVCKLLIHMRHPEVYQQLGVVPPRGFLLHGPPGCGKT
LLAQAVAGEMELPMLKVSAPELVSGVSGESEQKLRELFEQAVSSSPCILFIDEIDAITPK
REVASKDMERRIVAQLLTCMDDLNSLAVTAQVMVIGATNRPDSLDPALRRAGRFDKEICL
GIPDEAARLRILKTLCRKLKLPEDFDYRQLARLTPGYVGADLMALCREAAMSAVNRVLLE
RQDKNQGLVPMAEERAKSEGPQGAGPLPQGPERFQASADTVIQEMTDLSHGPQGDEQQLP
LATETTFRGELCRLLSLLKSSESLSEEQLAGLCILMSDFQGSLASVQPSAKREGFATVPG
VTWEDVGALHDIREELTMAILAPVRSPEQFKALGLSAPAGVLLAGPPGCGKTLLAKAVAN
ESGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGA
SVRVVNQLLTEMDGLETRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPPSDRHAI
LLTITKGGSRPHLEQDVSLEEMAHDVRSDCFTGADLSALVREASVNALRAYLLTQPNPSY
TGHSYSNGPVADIRVSKQNFEDAFKKVRPSVSKKDQRMYEQLKESLTR
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaataacagacgttgcggagtggacaaccgactcaaacagagagttgagcagtatttg
agtaaccagagtggccagtatgtggacattacttcaatggcacatgatcttcagagactc
tacagaatggactatggcaggcgaaacaagactgcattcaggattcaggtggaaaaagtc
catggagtgatatgcgatgaatctggactgaatgatctggagaacaagcacttggccaag
agagcgagacacactgacaaggatgctggggatggcagcagtaacttggatgacactact
gatagtgatgaggaccttcctgaacaaccgcccatcaacctcatgaataactccctgatg
tccctgtacaagaaggggaacccagagagtggggcatctcccaggagggacaagtctgca
tcagacagccctgcccctgaggctcactccacccctcagagtgttggtaccaaggtgtct
gcagggggctggttcatagacaagggcagaggcctggagcatgacagcatcctcattgac
ctgtgtgaagaggaggcagccagtcctgcaggaaataagcagacagatgcctcaatgctt
gagcctgagaagacaccaaaaaaaggcacatttaaaaaatctaaacggcagaaagaggga
gcgtcaaagggcaatgatggtgacatcgaggccagtatcatgaataagaaagcgaggact
aaatccattgaactacagtattcaacattaaagtttgaagatgttggaggcaatgaggac
acattgacggaggtgtgtaagctgctgatacatatgcgtcacccagaggtgtaccagcag
ttgggggtggtccctccacgggggttcctgctccatggcccccctggctgtggaaaaacc
ctgctggcccaagctgtggctggggagatggagctgcccatgctgaaggtgtcggcgcca
gagctggtgtctggggtgtcaggggagtctgagcagaagctgagagagctgtttgagcag
gctgtgtccagctccccttgcatcctgttcattgatgagattgatgccatcactcctaag
cgagaggtggcctccaaggacatggagagacggattgttgctcagctgctcacctgcatg
gatgacctgaactcattagcggtcacagcccaggtgatggttattggtgccaccaaccgg
ccagactctctggacccagcgctgcgccgggctggacgctttgacaaagaaatctgtctg
gggatacctgatgaagcagctcgtctcagaattctgaagaccttgtgtcggaagctgaag
ctccctgaggactttgactaccggcagctggcgcgtcttaccccggggtacgtgggagct
gacctcatggcgctgtgccgcgaggccgccatgagcgccgtcaaccgggtcctgctggag
aggcaggacaagaaccaggggctggtccccatggcggaggagagagcaaagtccgagggg
cctcagggcgcaggtcctctcccacagggcccagagagattccaggcctcagcagacaca
gtgatccaggagatgacagaccttagccacggaccacagggagacgagcagcagctgcct
ctggctactgagacaaccttcaggggggagctttgtcgcctgctgtccctgctgaagagc
agtgagtcgctgtctgaggagcagcttgctggcttgtgcatcctcatgtcagacttccag
ggttcccttgccagcgtacaaccctctgcaaagcgtgaaggcttcgccacggtgccaggc
gtcacctgggaggacgtgggggccctgcatgacatccgcgaagagctcaccatggccatc
ctggcccctgtgcgttctcctgagcagttcaaagctctgggtctcagtgctcctgcaggg
gtgttgctagctgggcctcccggttgtggaaagaccctgctggccaaggctgttgccaat
gagtcaggacttaacttcatctctgtcaaggggccagagctgctgaacatgtatgtggga
gagagcgagcgggccgtgcgacaggtgttccagagaggacggaactctgccccttgtgtc
atctttttcgacgagatcgatgcactgtgcccccgccgctccgggcatgagtctggagcc
agtgtccgtgtggtcaaccagctgcttactgagatggatggactggagacccggcggcag
gtcttcatcatggcggctaccaatagaccagatatcattgatcctgctgtgctgagacca
ggtcgtctggacaagaccctgtatgtgggcctcccacctccatcagaccggcacgccatc
ttactcaccatcaccaaggggggcagcaggcctcatctggagcaggatgtgagtctggag
gagatggcccatgacgtgcgcagtgactgcttcactggggcagacctgtctgcgttggtg
agggaagcctctgtcaatgctctgagagcctacctcctgacccaacccaacccatcttac
acaggtcacagctactccaacggccctgtggccgacatccgggtcagcaagcagaacttt
gaggacgccttcaagaaagtacggccgtctgtgtctaaaaaggaccagcgtatgtacgag
cagctaaaggaatctcttacaaggtga
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