Oncorhynchus gorbuscha (pink salmon): 124041293
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Entry
124041293 CDS
T07892
Symbol
exo1
Name
(RefSeq) exonuclease 1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124041293 (exo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124041293 (exo1)
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124041293 (exo1)
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
124041293 (exo1)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
124041293 (exo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
124041293
NCBI-ProteinID:
XP_046214689
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All DBs
Position
LG08:19832111..19842233
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AA seq
807 aa
AA seq
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MGIQGLLQFLKDASEPISVRKYKGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVTYCM
KFVDMLLSFGVKPILVFDGCNLPSKQEVDKARGERRQANLQKGKQLLREGKISEARDCFT
RCVNVTPSMAHDVIKAARTRGVDCVVAPYEADAQLAFLNKAGIAQAIITEDSDLLAFGCK
KVILKMDKQGNGLEIDQNHLGRCRSLGDVFTEEKFRHMCILSGCDYLSSLYGIGLGKACK
LLRMANNPDIIKVIRKMGQYLKMNVVVPDEYIDGFVKANNTFLYQLVFDPIKRKVVPLNP
YPEHMDPATLSYAGRNLGDCKGLQVALGNLDINTMESIDDFNPDATNVKPVKPRSRDWND
SQETRASTHPSIWSRGYIPGTLSASQPVGSPQRPPSTRGKERVISVQGLRLPHKNTHVKR
PREDSGVSDQDVLQQYSPSGQKRSRGEEDPGPTESHHISTCPQPSATAAATHPRQRNRFA
TLLQRRNQEGDGDGQEMQSRFFCSGSSSSEVASQNPESFVKGEVSHDEVTQDPREDYCIE
GYADTEENDSVDPHSPSPSPLSASQGLGVFCWSGSSSERSRTPTPTSGLSALQQFQRKKE
SFSWSQEGQRTRKTPGAPSPILGKEDKDSPPNSPPSQDSAYFSQHNHTSCNVVEVSPPTR
LEDSTRPKIYSSKDSDSVKSPSSSPTADEKKSSTMRLKVAGLPRMKPGDQGKGTKIRPSA
PARASGLRRKPAGPGKKLTTNNENNPGLQATISGLWENFGFKKENLKINPCKKGEPMSPV
KDNVLTLTPETDKDIYLISSVQKTICL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggggatccaggggctgttgcagttcctcaaagatgcctcggagcccatcagtgtgagg
aagtacaagggacagacagtggccgtagacacatattgctggcttcataaaggggcattt
tcttgtgcagagaaacttgccaaaggggagccaactgaccagtatgttacatactgcatg
aaatttgtggacatgctgttgtcttttggtgtgaagcccatcttggtgtttgatggctgc
aatctgccttcaaaacaggaggtggacaaagctcgcggagagcgtcgtcaggcaaatctg
cagaaaggtaagcagctcctacgtgagggaaagatttcagaggccagagactgctttact
cgctgtgttaacgtcaccccttccatggcccatgatgtcatcaaggctgcaaggaccaga
ggagtggactgtgtggtggccccgtatgaagctgatgcccagctggccttccttaacaag
gctggcattgcacaggctatcatcactgaagactcagatttattggcatttggctgcaaa
aaagtgatcctaaagatggacaaacaggggaacggtctagagattgaccagaaccacctg
gggcggtgccgctctctgggtgatgtcttcacggaagagaagttccgccacatgtgtata
ctctctggctgtgactatctgtcctcactctatgggattggcttgggcaaagcctgtaaa
ctgctgaggatggcaaacaacccagacatcattaaggtgataaggaagatgggccagtac
ctgaagatgaatgtggttgtgccagacgagtacattgacggctttgttaaggccaataac
accttcctctaccagctggtgtttgaccccatcaagaggaaggtggtgcctctcaacccc
tatccagagcacatggaccctgccaccctcagctacgctggccgtaatttaggagattgc
aaaggtttacaggtggccctgggtaacctggatataaacaccatggagagcattgatgac
ttcaacccagatgctacaaatgtcaagccagtgaaaccacgcagtcgtgactggaatgac
agccaggagactcgggcctccacacaccctagcatctggagcagaggttacataccaggc
accctctctgcctcccagcctgtgggctctccacagaggcctccctcaaccagggggaag
gagagggtcatcagtgtgcaggggctgaggcttcctcacaagaacacacatgttaagaga
cccagagaagactctggtgtttcagaccaggatgtgctgcagcagtactctccctccggt
cagaagcggtccagaggggaggaggaccctggacccacagagagccatcacatctccaca
tgcccccagcccagtgccactgctgccgctacccatcccagacaacgcaaccgctttgcc
accctgctacagaggagaaaccaggaaggagatggagatgggcaggaaatgcaaagcagg
ttcttctgtagtggcagcagctccagtgaggtggccagccagaatccggagtcttttgtc
aaaggggaggtatctcacgatgaggtcacacaggaccccagggaggactattgtatcgag
ggatatgctgatacagaggaaaatgactctgttgaccctcatagcccatccccctcccct
ctgtctgccagtcaagggttaggggtgttctgctggtcaggcagctcctcagagagatcc
aggaccccgacacccacatctggcctctcggcactgcagcagttccagcgcaagaaggaa
agcttctcctggagccaggaaggccagagaactcggaagacccccggagccccatctcct
attctgggcaaagaagacaaggattcaccaccaaactctccaccgtctcaggacagtgcc
tacttctctcagcataaccacacttcctgcaatgtcgtggaagtgtccccacccactcgg
ctggaggattccaccaggcctaaaatttactctagtaaggattcagactctgtcaaaagc
cccagttcctctccaacagcagatgaaaagaaatccagcacaatgagactgaaggtggca
ggtctcccgcggatgaaacccggtgaccaaggaaaagggacaaagatccgaccctctgcc
cctgccagggccagtggcctccgtagaaagcctgcaggccctggaaagaaactcaccacc
aacaatgagaacaaccctggcctccaggccacaatcagtggcctctgggaaaactttggt
tttaagaaagaaaatctgaagataaacccctgtaagaaaggagagcccatgtcaccagtg
aaggacaacgtgctaaccctcacacctgaaacggacaaggatatttacttaatctccagt
gttcagaaaaccatatgcctctga
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