Oncorhynchus gorbuscha (pink salmon): 124041314
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Entry
124041314 CDS
T07892
Name
(RefSeq) lymphocyte-specific helicase-like isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124041314
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124041314
BRITE hierarchy
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
Shugoshin_C
CdiI
Motif
Other DBs
NCBI-GeneID:
124041314
NCBI-ProteinID:
XP_046214729
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All DBs
Position
LG08:20808246..20817877
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AA seq
854 aa
AA seq
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MSCVKEETRSMSPHCPKPNESEEPLGTAMEETLPENAAASVEAEDVVSAVVITKEMEEEE
KQLMEKGEKQEEEMMKKAREAREKESHDIRFKRLQHLLEKSNIYSKFLLTKMEQQQQEEM
LKKERLEKTHKGTGKKTGRAERKKREREEDYKIADVMSKEEIMSKAKKPKVEDEEVLGKK
KLEAADIEKMSDSNADIKGRLSEAVRDNAKQLLDPDREVNGQAVPAQQPLLFTGGVMRSY
QIEGVEWLRMLWENGINGILADEMGLGKTIQCIAHVAMMLERKVLGPFLVVAPLSTLPNW
INEFKRFTPEVSVQLYHGPAKERMSLLKQIRKPQGPHNMCPVVVTSFEIAMIDRKFLQRF
QWKYLIVDEGHRIKNLNCRLVRELKMLPTDNKLLLTGTPLQNNLAELWSLLNFLLPEVFD
DLKSFESWFDIDTIGSNAKQVVANEREQNILHMLHQILTPFLLRRLKSDVTLEVPPKKEI
VVYAPLTAKQESFYTAVVNKTIAKMLGQEKGEAPVVLMTDGRPKRRTRRPVDYKETDGDT
PYDLEKYLERVQKEAELSPAPVVDVQMPLDSQINLKLQNILMLLKRCCNHPYLIEYPLDP
ATQGFKIDEQLVQTSGKFLILDRMLPELKRRGHKVLIFSQMTSILDILMDYCYLRGYQYS
RLDGTMAYADREENMTKFSSDPEVFLFLLSTRAGGLGINLTAADTVIIFDSDWNPQADLQ
AQDRCHRIGQTKPVVVYRLVTANTIDQKILERASAKRKLEKMVIHKNKFKGGKAELKQTK
SCVDVSELMDLLSARDYEKEVKSITGKVISDEDLEFLLDRSDLLDKAKRSSKQKVGVFKV
IEAKESSEINLTRV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagttgcgtaaaggaagaaacccgaagcatgtctcctcattgtccaaagcctaacgaa
tctgaagaaccgctgggtacagctatggaggagactttgcctgaaaatgcagctgcaagt
gtggaagctgaagatgtagtgtctgcagttgtcatcacaaaagagatggaggaagaggag
aaacaattgatggagaaaggagagaaacaagaagaggagatgatgaaaaaggctcgagaa
gctcgggagaaggaatctcatgacattcgcttcaagaggctgcaacacttgctggagaaa
agtaacatctattccaaattccttcttaccaagatggagcaacagcagcaggaggaaatg
ctgaagaaagagagactggaaaagacacacaagggcactggcaaaaagactggaagagct
gaaagaaagaaaagggagagggaggaagattacaaaatcgctgatgtcatgtctaaagag
gaaattatgtccaaggccaagaaacctaaagtggaggatgaggaggtccttgggaagaag
aagctagaagcggcggacattgaaaagatgagtgactcaaatgctgacatcaagggccgt
ctgtcggaggctgtgagagacaatgccaaacaactgctggacccagacagggaagtgaac
gggcaggccgtgccagcccagcagcccctgctcttcactgggggagtcatgaggtcgtac
cagatagagggcgtagagtggctcaggatgttgtgggagaatggtattaatgggatcctg
gcagatgagatgggtctggggaagaccatccagtgcatcgcccacgtggccatgatgctg
gagagaaaggtgctgggacccttcttggtagtagcccccctgtccactctgcccaactgg
atcaatgagttcaagcgcttcactccagaggtgtccgtacagctgtaccatgggcctgct
aaggagaggatgtcgttgttaaagcagattcgtaagccccaggggcctcacaacatgtgc
cctgtggtggtcacctcctttgagattgccatgatagacaggaagtttctgcagcgcttc
cagtggaagtacctgattgtggacgagggccacaggatcaaaaacctgaactgcagactg
gtgagggaactcaagatgctgcccacggacaacaaactgctcctgacaggcacgccgctg
cagaacaacctggctgagctctggtcactgctcaacttcctcctgcctgaggtctttgac
gacctcaagagctttgagtcgtggtttgacatcgacaccattggatcaaatgcaaaacaa
gttgtggctaacgaacgagagcagaacatcctgcacatgctccaccagattctgacgccg
ttcctgctacgacgactgaagtctgacgtgacgttggaggtgccgcccaagaaagagatt
gttgtgtacgccccactcactgccaaacaggagtctttttacactgctgtggtcaacaag
accattgccaaaatgctgggccaggagaagggggaggccccagtggtgctgatgaccgac
ggcaggcctaagcgcaggaccaggaggcctgtggactacaaagagactgatggtgacacg
ccctatgacctggagaaatacctggagagggttcagaaggaggcagagctgagccccgcc
ccggtggtggacgtgcagatgcccctggattcccagatcaacctgaaactgcagaacatc
ctcatgctgctgaagaggtgctgtaaccacccctacctcatagagtacccactggaccca
gccactcaggggttcaagattgatgagcaactggtgcagacctctgggaagttcctcatt
ctagacagaatgctgccagagctgaagaggaggggacacaaggtgctgattttcagccag
atgacgtccattttggatatcctaatggactactgctacctgcgtggttaccagtacagc
cgactggacgggacaatggcttatgccgacagagaggagaacatgacaaagttctcgtct
gacccagaggtgttcctcttcctactgagcaccagagcaggtggcctgggcatcaacctg
actgctgctgacacggtcatcatctttgacagtgactggaacccccaggcagacctgcag
gcccaggataggtgccaccgcatcgggcagaccaaaccagtggtggtgtatcgcctggtc
actgccaacaccatcgaccagaagatcctggagagagcctcagccaagaggaaactggag
aagatggtcattcacaagaacaaattcaaaggaggaaaagctgagctcaaacagaccaag
agctgtgttgatgtgtctgagctgatggatcttctcagcgcaagagattacgagaaggag
gtgaaaagcatcacggggaaggtcattagtgacgaggacctggagtttctgctggaccgc
agtgacctactagacaaggccaagaggagctcaaaacagaaggttggagtcttcaaggtt
atcgaagccaaggaatcatctgagatcaacttgaccagagtttga
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