Oncorhynchus gorbuscha (pink salmon): 124041319
Help
Entry
124041319 CDS
T07892
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124041319 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124041319 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124041319 (si:ch211-269e2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
tRNA_bind_3
AHSP
Motif
Other DBs
NCBI-GeneID:
124041319
NCBI-ProteinID:
XP_046214744
LinkDB
All DBs
Position
LG01:66845933..66893621
Genome browser
AA seq
1189 aa
AA seq
DB search
MIAEPTVTSRSSVQNENLAVDANSSGAVNHTVGGARNENRQKILRGKRRARGGSENAKRR
RTKVTNGSLGRAQNRHLKHGDIEAVTLFEVVTMGRSAMQAVVDDWIEAYITDRDSGLLDL
ISFFIQCSGCKGLVTAEMFQSRQDDVMRKMMEELDEDSGLQYKRFLAFPWILTVTWPMDM
DSGEYPLTMSGPYWRRFRGEFCEFVSVLVTQCQYNVIFDSYLMDTLISLLTELSDSRVRA
FRHTCTLAAMKLLSSLIGVALSLSVSIENSQRLGEVERTKTSGRRNSPRLERIHRKTTEL
QDRRVEIENMMDAIFKGVFLKRYRDVLPEIRSMCMEELAVWMKLYSPVFLTDSYLKYMGW
MMHDKVPDVRLKCVLGLQGLYGDPLLLPKLDLFNSRFKDRMISMTLDKDHEVAVQTLRLL
ILISQSADEVINPEDYKQLFQLVYSSHRPLATTAGELLYTRLLSSPTPAPDLREGASEQD
THTQLTTARVRALLHFYQDSELHQHVVYLVDSLWDCAGAMLKDWSSLTSLLLQDPSTQDA
DLSAGEQSLVVELLVASVRQAVEGPLLAGRSTCKKVVSAREKKSQVDDCGRLTEHFLKVL
PQLLIKYSGSPETVASLLKIPQYLHPDSPNAEFPQALSGLLAEMGAVLELHTDPAVLEAA
ARSYLSLCGEETAWHPLARPGRDAVVQCWADRLAALLGDALQDGNFTADEEKTGEILSTL
KKLTAFHNAQDLSRWGLHEQVFPLLSVEIIHGGLPTQLTVEALQYVSYSVLWNLNTSRET
LTSREKAVAQRSQMRALCEKCLRCLSHNDQSVKEQAFLSLCDVLTAHNYQLQVWDPSSYG
PLLYTPDPKLQRALLAFILEHVFTGAEYDSHSRGSDVESGEGRLEELHRRRSLLAGFCKL
IVHGVLEMSMAADLFKYYMKYYNNFGDIIKETLSRTRQMDKIESARTLVLCLQQLFLRLK
QEQDSGVTCSSGVQTFSSIKELARRFSLTFGWDQTKSRESLTLIHRDGIEFVFQGFVQRA
EKPSPPYLSYLTILSEFSSKLLRPDKKIVYTYLQRYISEQIISNREECWLPLIYYRASLL
ATGAEGEDAVSFISSDTLKQPSLANRSRSPSVRHSPTADGDMRSPSALTSTETKVRRLHK
ASSSTSPEDRKPEVELGPIAREPPPTIVISEEPFHANEELDVDTVEVDL
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaacctacagtcacctccaggtcctcagtacagaatgagaacttggctgtg
gatgcaaactcctctggagctgtcaatcacacagtgggtggagcccggaatgagaacaga
cagaagattttgagagggaagaggagggcacgggggggctctgagaatgccaaacgcaga
cgcaccaaggtaaccaatggcagtctgggtcgggcacagaacagacacctcaaacatggg
gacattgaggctgtcacattgttcgaggtggtcaccatgggcaggagtgccatgcaggct
gtagttgatgattggattgaggcgtacatcacagacagagactctggcctcctggacctc
attagcttcttcatccagtgttccggttgcaaaggtttggtgacagctgagatgttccaa
agcaggcaggatgatgtcatgaggaagatgatggaggaattggatgaggattcaggcttg
cagtataaaagattcctggccttcccctggatcctcacagtcacgtggcccatggacatg
gacagtggggaatatcctctcaccatgtctggtccgtactggcgccggttccgtggtgag
ttctgtgagtttgtgtcggtgttggtaacccagtgtcaatacaatgtgatctttgacagc
tacctcatggacacactcatctctctgctcaccgagctgtccgactcccgtgtacgagcc
ttcagacacacctgtacattggcagcaatgaagttgctaagctctctgattggagtagcc
cttagtctgagtgtgagtatagagaacagccagagactgggcgaggtggagagaaccaag
acatcaggaagacgcaactcaccaagactggagagaatacacaggaagaccacagagctg
caggatagaagggtggagatagagaacatgatggatgccatattcaaaggagtcttcctg
aagaggtaccgggatgtgctcccagagatccggtccatgtgtatggaagagctggctgta
tggatgaaactttacagtccagtgtttctgactgacagctacctcaaatacatgggctgg
atgatgcatgacaaggtacctgacgtgcgtctgaagtgtgtgttggggctacagggtctg
tatggagacccgctcctcctgcccaaactagacctcttcaacagccgcttcaaggacagg
atgatctctatgactctggacaaggaccacgaggtggcagttcagaccctgagactactc
atactcatctcccagtcagctgatgaggttattaatcctgaggactataagcagctgttc
cagttggtgtactcctcacatcgtcctctggctaccaccgcaggagagctgctctacaca
cggctgctcagctcccctactccagcacctgacctccgagagggggcgagtgagcaggac
acacacacacagctgacgacagccagagtgagggctctgctgcacttctaccaggacagt
gagctccatcagcatgtagtatacctggtagacagtctgtgggactgtgctggtgccatg
ctgaaggactggtcatctcttacctcgttactgctacaggacccctccactcaggatgca
gatctgagtgctggagagcagtctctggttgtagagttattggtggcatcagtgcgtcag
gcagtagagggacccctgctggcgggaaggagcacatgcaagaaggtggtaagtgccaga
gaaaaaaagtctcaggtagatgactgtggcagactcactgaacacttcctcaaggtactg
ccacagttgctgattaagtattcagggagcccagaaactgtggcatctcttttgaagata
cctcagtacttacacccagattcgccaaatgcagaattcccacaggcgttgtcgggcctg
ctggctgagatgggagctgttttggagctccacactgaccctgcagtgctggaggcggct
gctcgctcatacctcagcctgtgtggagaggaaacagcctggcaccccctggcacgacct
ggcagagacgcagtggtccaatgctgggcagacagattggcagcactgctgggtgacgca
ctgcaggatggcaacttcactgctgatgaggaaaagacaggagagattctatccacactg
aagaaactcactgctttccacaatgcccaggacctgtctcgttggggactgcatgagcag
gtctttcctcttctctcagtggagatcattcacggtggattacctacacagctgacagtg
gaagctctgcagtatgtatcttactctgtcctctggaatctcaacaccagtagagaaacc
ctgacctcacgggaaaaggctgtagcccagaggagtcagatgagagcattgtgtgagaag
tgtctacgttgtctgtcccacaatgatcagagtgtgaaggagcaggcattcctgtctctg
tgtgatgtcttgacggcccacaactaccagttgcaagtgtgggatccctcgtcttacggc
cccctgctctacactcccgacccgaaacttcagagggcgctgcttgccttcattctggaa
cacgtcttcactggagcagagtacgacagccacagcaggggtagtgatgtagagtctggc
gaggggaggttggaggagctccacagacgtaggagcttattggcaggcttctgtaaactc
atagtacacggggtgctggagatgagtatggctgctgatctctttaagtattacatgaag
tattataataactttggtgacatcattaaggagactctcagcagaacgcggcagatggat
aagatcgagagtgctcgcacgctggtgctctgtctgcaacagttgttcctgcgtctgaag
caggagcaggacagtggagtcacctgtagctcaggtgtccaaacattcagcagcatcaag
gagctggccagacgcttctctctcaccttcggctgggaccagacaaagtccagagagtcc
ctcactctgatccatagggacggtatagagtttgtttttcagggctttgtccagagagca
gagaagccctctcctccatacctctcctacctcaccatcctcagcgagttctccagcaag
ctcctcagaccagacaaaaagattgtttacacctacctacagaggtacataagtgaacag
atcatcagtaacagagaggagtgttggctgccactcatctactaccgagcctccttattg
gctactggagctgagggggaagatgctgtgtccttcatcagctctgatacgctaaagcaa
ccgtctctagccaatcgctcacgctctccctctgtcagacacagcccgactgctgatgga
gacatgaggtccccgtctgctcttacctctactgagaccaaagtaaggaggctccataag
gccagcagcagtacaagcccagaggacaggaagccagaggttgagcttggccccatcgcc
agggaacccccgccgaccatagtgatatcagaggagccgttccacgctaacgaggaattg
gatgtggatactgtggaggttgacctgtga
DBGET
integrated database retrieval system