Oncorhynchus gorbuscha (pink salmon): 124041436
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Entry
124041436 CDS
T07892
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124041436 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124041436 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124041436 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Arc_trans_TRASH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
124041436
NCBI-ProteinID:
XP_046214969
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All DBs
Position
LG08:27752647..27765019
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AA seq
310 aa
AA seq
DB search
MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRITPGSKAAQASLSVGDQILAIDGEPTESM
THLQAQNKIKGCLEEMILSVDRSETKIWSPLSSEDGKTNPYKMNLASEPQEVKPIGSAHN
RSALPFAGFGPKVVTNQYNNPAGLYSSENIKDFNTAVDDVKTIATAANEPSNIPTVTDSE
VYKMLQENQEADEPPRQSASFKVLQEILESDPDKPSGFRSVKAPAAKMVSTVGNANKLPI
CDKCGSGIVGMVVKLRDKFRHPECYTCSNCDVNLKQKGHFFVEDQIYCEKHARERVTPPE
GYDVVTVFPK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctctacgggttgtcgtgcaaggtcctggaccttggggattccgtctagttggtggg
aaggattttgaacaacccttgactatctcgcggatcactcctggcagtaaggctgcccag
gccagtctgagtgtcggggatcagatcctggccatcgatggagagcccactgagagcatg
actcacctgcaggcacagaacaagatcaagggctgcttagaggaaatgatcctctctgtc
gacagatcagaaactaaaatctggtcaccgctctcttctgaggatggaaagaccaacccg
tacaagatgaatctcgcatctgagccgcaggaggtgaaacccataggttccgcccacaac
aggagcgccctgccatttgccgggtttggccccaaggtggtaaccaatcagtacaacaac
cctgccggtctctactcctccgagaacatcaaggactttaacacggccgtggatgacgtg
aaaacaattgccactgccgctaacgagcccagcaacatcccaacagtgacagactctgag
gtctacaaaatgctgcaggaaaaccaagaggctgatgagcctcctcgacagtccgcttca
ttcaaggtgctgcaggagattctggagtcagatcctgataaaccctctgggtttaggagt
gtgaaggcccccgccgcaaaaatggtctcaacagtgggaaatgcaaacaagttaccaatc
tgtgacaaatgtggatcagggattgtagggatggttgtcaagttgcgggacaagtttcgt
caccccgagtgctacacctgctccaattgtgacgtcaacctgaaacagaagggacatttc
ttcgtggaggaccagatctactgcgagaaacacgcacgcgagcgagtgactccacccgaa
ggctatgacgtggtcacggtcttccccaagtag
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