KEGG   Oncorhynchus gorbuscha (pink salmon): 124041436
Entry
124041436         CDS       T07892                                 
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124041436 (pdlim1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ogo04990]
    124041436 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:ogo04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   124041436 (pdlim1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2 Arc_trans_TRASH Pept_S41_N_bact
Other DBs
NCBI-GeneID: 124041436
NCBI-ProteinID: XP_046214969
LinkDB
Position
LG08:27752647..27765019
AA seq 310 aa
MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRITPGSKAAQASLSVGDQILAIDGEPTESM
THLQAQNKIKGCLEEMILSVDRSETKIWSPLSSEDGKTNPYKMNLASEPQEVKPIGSAHN
RSALPFAGFGPKVVTNQYNNPAGLYSSENIKDFNTAVDDVKTIATAANEPSNIPTVTDSE
VYKMLQENQEADEPPRQSASFKVLQEILESDPDKPSGFRSVKAPAAKMVSTVGNANKLPI
CDKCGSGIVGMVVKLRDKFRHPECYTCSNCDVNLKQKGHFFVEDQIYCEKHARERVTPPE
GYDVVTVFPK
NT seq 933 nt   +upstreamnt  +downstreamnt
atgcctctacgggttgtcgtgcaaggtcctggaccttggggattccgtctagttggtggg
aaggattttgaacaacccttgactatctcgcggatcactcctggcagtaaggctgcccag
gccagtctgagtgtcggggatcagatcctggccatcgatggagagcccactgagagcatg
actcacctgcaggcacagaacaagatcaagggctgcttagaggaaatgatcctctctgtc
gacagatcagaaactaaaatctggtcaccgctctcttctgaggatggaaagaccaacccg
tacaagatgaatctcgcatctgagccgcaggaggtgaaacccataggttccgcccacaac
aggagcgccctgccatttgccgggtttggccccaaggtggtaaccaatcagtacaacaac
cctgccggtctctactcctccgagaacatcaaggactttaacacggccgtggatgacgtg
aaaacaattgccactgccgctaacgagcccagcaacatcccaacagtgacagactctgag
gtctacaaaatgctgcaggaaaaccaagaggctgatgagcctcctcgacagtccgcttca
ttcaaggtgctgcaggagattctggagtcagatcctgataaaccctctgggtttaggagt
gtgaaggcccccgccgcaaaaatggtctcaacagtgggaaatgcaaacaagttaccaatc
tgtgacaaatgtggatcagggattgtagggatggttgtcaagttgcgggacaagtttcgt
caccccgagtgctacacctgctccaattgtgacgtcaacctgaaacagaagggacatttc
ttcgtggaggaccagatctactgcgagaaacacgcacgcgagcgagtgactccacccgaa
ggctatgacgtggtcacggtcttccccaagtag

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