KEGG   Oncorhynchus gorbuscha (pink salmon): 124041456
Entry
124041456         CDS       T07892                                 
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03430  Mismatch repair
ogo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    124041456 (mlh1)
   03460 Fanconi anemia pathway
    124041456 (mlh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ogo03400]
    124041456 (mlh1)
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     124041456 (mlh1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 124041456
NCBI-ProteinID: XP_046215006
LinkDB
Position
LG08:28473510..28493486
AA seq 723 aa
MSGVIRRLDETVVNRIAAGEVIQRPANAIKELLENCLDAKSTNIQVTVKEGGLKLIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLNAISTYGFRGEALASISHVAHVTITTKTADAK
CAYRATYCDGKLKTQPKPCAGNQGTQITAEDLFYNVSTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFAVKKQGETMADVRTLPNASILDNIRVVFGNTVSRELIEVGCEDQKLAYKLK
GHISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNSHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIIESVQKQIESKLLGSNSSRTYFTQTLLPGLSVSTSEGKSSS
NSTGDSERVYAHQMVRTDSRAQKLDSFLQPASKLAPTPTANPNGQSRGEPVTTNDMEEMD
NAEILEEQAPGATEDGEGTSRNTPADLPRKRPRAGEDEEQENLTAAATTRRRAIKLSSVK
ELRDDITEHAHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSQELFYQILIYD
FGNFGILRLSEPAPLYDLAMLALDSEESGWSEEDGPKEGLAQYIVDFLKKKSEMLEDYFS
MEIDQEGNLTGLPLLLDKYTPPMEGLPMFILRLATEVNWDNEKDCFRDFSKECSQFYSIR
KQYVLEPGEEEQDAELNSWRWKVEHLLFKSFRSLFSPPKHFSEDGSVLQIANLPDLYKVF
ERC
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgtccggggtgattcggagactcgatgagaccgttgttaatcggattgctgctggagaa
gttatccaacgtcctgcaaatgctatcaaagaattgcttgaaaactgtttagatgccaag
tccaccaacatacaggtgactgtgaaggaggggggtctgaaacttatccagatacaagac
aatggcactggcatcaggaaagaagatatggagatagtatgtgaacggtttacaacaagc
aagctccagacttttgaggacctcaacgccatctcgacctatggtttccgaggagaggca
cttgccagtataagccatgttgcccatgtgaccataacaaccaaaacggctgacgccaag
tgtgcttacagagccacctactgcgatgggaaactaaagacccaacccaaaccctgcgct
ggaaaccaggggacacagatcactgcggaggatctgttttataacgtgtccaccaggagg
aaagcactgaagagccccagtgaggagtactccaggattgtggaggtggtgagcaggtat
gctatacacaactctgggaaaagctttgctgtcaaaaagcaaggtgagaccatggctgac
gtcaggaccctacccaacgcctccatactggataatatccgtgtggtgttcggcaataca
gtcagcagggagctgattgaagtgggctgtgaggatcagaagcttgcctataagctgaag
ggccacatctccaatgccaactactcagtgaagaagtgcatcctcatcctcttcatcaat
catcgtctggttgaatcgagtgccttaaaaaaagccattgagaccgtttatgctgcatac
cttcccaagaactctcacccatttctatatctcagcctggagattgcccctcataacatc
gacgtgaatgtccaccctaccaaacacgaggtgcacttcctccacgaagactgtatcatc
gagagcgttcaaaaacagatagagagcaaactcctgggctccaactcctcacgcacgtac
ttcacacagacattgctgcctgggctgtctgtctccaccagcgaggggaagtcttcctcc
aactccacgggggacagtgagcgggtctacgcacatcagatggtcaggaccgacagtaga
gcccaaaagctggactcctttctccagccggcgtccaagctggcccctactcccaccgcc
aaccctaatgggcagagcaggggggaacctgtgaccaccaatgacatggaagagatggac
aacgcagagatcctggaggaacaggcgccaggtgccacagaggatggggagggaaccagc
cgaaataccccagctgatctccccaggaagcgtccccgtgccggtgaggacgaggagcag
gagaacctgactgctgcagccacaaccaggagacgagccatcaagctgagcagtgtgaag
gagctgagagatgacatcactgagcacgcacacaaaggtcttcaagagatgcttcagaat
cactcgtttgtgggctgtgtcaacccccagtggactctgatccagcaccataccaaactg
taccttctcaacaccaccaaactcagccaggagctattctaccaaattttgatctacgac
ttcggtaactttggcatcttgaggttatctgagcctgcgccactctatgacctggccatg
ctggctctggactccgaggagagcggctggtcggaggaggacgggcccaaggagggtctg
gcccaatacatagtcgacttcttgaagaagaaatctgagatgctggaggactacttctcc
atggagatcgaccaggaaggaaatctcaccggtttgccattgctgcttgacaagtacacc
cctcctatggagggtctgcccatgttcatcctacgtttggctactgaggtgaactgggac
aatgagaaggactgcttcagagacttcagcaaggagtgcagccagttctactctatcagg
aaacagtatgtcctggagccgggagaggaggagcaggatgcagagctgaactcgtggcgt
tggaaggtggagcatctcctgtttaaatccttccggagcctcttcagtccccctaaacac
ttcagtgaggatggcagcgtactccagattgctaatctaccagacctctacaaagtattt
gagcgatgctaa

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