Oncorhynchus gorbuscha (pink salmon): 124041463
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Entry
124041463 CDS
T07892
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogo03009
]
124041463 (rrp12)
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
90S particles
Other 90S particles
124041463 (rrp12)
Pre-60S particles
Other pre-60S particles
124041463 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
124041463
NCBI-ProteinID:
XP_046215026
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All DBs
Position
LG08:complement(29450867..29480626)
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AA seq
1291 aa
AA seq
DB search
MVKSGKLKSGAASKLKRWKKGHSSDSNPQTSRFRQAAKSRFFSRPSEKSDLTVDALKLHN
ELQAGTLERGAGDRGDACMEETAEQALSERSAGTFLSGLSDCSNLTFRKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTLEAVDSGESLAAVAYLLNLVMKRVPA
PVLISKFSDTAKALMDVMSTLASSESASALRWILSCLSTLLRKQDVTVWSYPSTLQTYHG
LLSFTVHSKPKIRKAAQHGVCSILRGSDLLFTDNAPTHHPAAAMAAKFCIKEIEQAGGSK
EDTTTLHVLGLLKDLMVTFPLNAVKSCCETLLRVMTLSHVLVTACAMQAFHKLFSGKPNP
VTLSAELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLASVQSSLSLGHLPRLFST
AMSCLLSPHPQVVSAATNTLKTLLSECVAPRMEEIGPVSPTASSGNPSYVCKMFRIVEEG
LSYRFHASWPFVLQLLGCFYRAAGKHTHSVMTKSLQSLADLRSTPRFPFCGELDLAVGGA
VESMGPEVLLTAVPLNITGLEDNLEFPRSWLIPVIRDHVKNTHLAYYTSYLLPLAATLRQ
RAEELEKAGQKLEAKVYKTLQLQIWTMLPGFCVGPLDLLVSFKGVARALGMAINERPDLR
LTICQAIRTLITKSCNTEEEKAEVGRFAKNFLPILFNVFSQQPAPGDISPYRMAVLDTIK
VYLTVTDPQMVCTFLSKATERLSSPDSTEFIRLSVMDLMVAMAPCVDEVTMSQTFELIRP
YLENKEPHMQKKAYRVLEEMCGGEREECRSFVLSHLETLKHVLLGTLKNASSPAKRPRLK
CLIHIVKQLSDEHRDFITALLPEVIICTKEVSVGARKNAYTLLVEIGNAFIRFCGDAKEA
LEQYLLLVYVGLTGSVTMITCTVLALTRLVFEYKDSIDMGSMEHLLHNVCLLLTSRTREI
VKAALSFVKVILFVMDPKTLAGHVTVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFE
LVKSKLPAEHHKVLVNIRKAEARTKRSRLADEDHDDSDSGDDKPKARGASIEEILAESDS
DMSDDERPKGAKTQKKPTKQTGRAWLKEGQGDEPLNFLDPTVSQRVLATNPDMKKRAKVQ
HNFKVTSDGRLIIKEDNDEGDKTKDDEGEMKDILEEAGVKSIKTKRRTFRDGHYDDDMEI
EPQLKYKAGGSGIHRPLGGSRDLGGDYKAKKGKGDVKRKGKVDPYAYIPLRKAQLNRRKK
AKMQGQFKGMVRGAQKGAQSGKRMQRNKRRA
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatctggaaaattaaaatctggggccgcatcgaaactgaagcgatggaaaaag
ggacacagcagcgactcgaacccccagacgagccgattcagacaggctgccaaaagccgt
ttcttcagccgcccctcggagaagagtgacctgacagttgatgcactcaagctgcacaac
gagctgcaggcaggaaccctggagaggggtgcgggtgaccggggagatgcctgtatggag
gagacggcagagcaggccctttcagagaggagcgcagggaccttcctcagtgggttgtca
gactgctctaacctcaccttcagaaaggtgcagcgcttctgggagtccaactcagctgcc
cataaagagatatgtgcagtgctggctgcggtgactgaggtgattcgatctcagggaggg
aaggagacggaaacagagtactttgcagctctgatgaccaccctggaggcagtggattca
ggggagtctctggctgctgtagcctacctcctcaacctggttatgaaacgggttccagca
ccagtgttgatttctaagttctctgacacggccaaagctctgatggacgtcatgtccacc
ctggccagctcagagtccgcctccgcactcagatggatcctgtcgtgcctctccactctt
ttgcggaagcaggatgtcacagtgtggagttacccgtctactctgcagacataccacggt
ctactcagcttcactgtccacagcaagcccaagatccgtaaagcagcgcagcacggtgtg
tgttccatcctgagaggcagtgacttactgtttacagacaacgccccgacccaccaccct
gctgccgcgatggccgccaagttctgcatcaaagagattgaacaggcaggaggcagtaag
gaggacaccaccaccctgcacgtcctgggtctcctgaaggacctcatggtcaccttccct
ctcaatgccgtcaagtcctgctgtgagactctgctcagggtgatgaccctcagccacgtg
ttggtgacagcatgtgccatgcaggccttccataagctgttcagtgggaaacccaaccct
gttaccctgtctgctgaactcaatgctcagatcatcacggccctgtatgactacctgccc
agtgagaatgacttgcagcctctactagcctggctggctgtaatggagaaagcccacgtt
cacctggccagtgttcagtcgtctctaagtctgggtcatctccctcgtctcttctccaca
gccatgtcctgcctcctgtcacctcacccacaggtcgtctctgctgccaccaatacactc
aagactctgctgtcggagtgtgtggctcctcgcatggaggagatcggccccgtcagcccc
accgcttcctctggaaacccttcctacgtctgcaagatgttccgtatcgtggaggagggt
ctgtcgtatcgtttccacgcctcctggccgtttgttctgcagttgctgggctgcttctac
agagcagcagggaaacacacacactcggtcatgaccaagtctctccagtctctagcggac
ctgcgctccaccccccggttcccgttctgtggtgagctggacctggctgtaggtggcgct
gtagagagcatgggacctgaagtactgctgaccgctgtaccgctcaacatcactgggctg
gaagacaatctggagttccctcgtagttggttgatccctgtcatacgggatcacgttaag
aacacgcatctggcttactacacatcatatctcctgccgctcgctgccacactccgacag
agagctgaggagctggagaaggctggacagaaactggaggctaaagtctacaagacactc
cagctgcagatctggaccatgctgccagggttctgtgtggggcccttggacctgctggtg
tcgtttaaaggtgtcgcaagggcactgggcatggccatcaacgaacggcctgacctacga
ctgaccatctgccaggccatacgcacactcatcaccaagagctgtaacaccgaagaggag
aaggcggaggtggggcgttttgctaagaacttcctgcccatcctgttcaacgtgttcagc
cagcagcctgctcctggagacattagcccctataggatggctgtcctagacaccattaaa
gtctacctgactgtcacagacccacagatggtgtgtaccttcctatcgaaagctacagaa
agactcagcagcccagacagcactgagttcatacggttgtctgtcatggacctgatggtt
gccatggcaccctgtgtagatgaggtcacaatgagtcagacctttgagctgattaggcca
tacctggagaataaggagccacacatgcagaagaaggcataccgcgtattggaggagatg
tgcggtggagagagggaggagtgtagatctttcgttctctctcacctagagacgctcaaa
cacgttctgctggggacactgaagaatgcttcatctcccgccaagaggcccagactaaag
tgtcttatccacattgtgaaacagctgagtgatgaacacagagacttcatcactgccctg
ctaccagaggtgatcatatgtactaaggaggtgtcagtgggagctcgtaagaacgcctac
actctactggtggagataggaaacgcttttatcaggttctgtggagatgccaaagaagcc
ttggagcagtacctactgttggtctacgtggggctgaccggctcggtcacgatgatcaca
tgtacagtcctggctctcactagactggtctttgagtacaaagactctatagacatggga
tcgatggagcacctcctacacaacgtgtgcctgctgctgacgtctcggaccagggagatt
gtgaaagcagcgctcagcttcgtcaaggtcatcctcttcgtcatggaccccaagacgctg
gctggacacgtcactgtgatgatggagggtgttgggaacatcaaggatgacgttagaaga
cacttcaggacgaaactgaaaaacattttcaccaagtttatcaggaagtttgggtttgag
ttggtgaaaagcaagctgcctgcggagcatcataaggtgttggtgaacatccgtaaggct
gaggccagaaccaagagatcaagactggcggacgaagaccacgacgactcagacagcggg
gacgacaagccaaaagccaggggagcgagtattgaggagatcttggccgagtcggactct
gatatgtcagatgacgaaaggcctaagggcgctaagacccagaagaagcccacaaagcag
acggggcgggcctggctgaaggagggacagggagacgaaccactcaacttcctggatccc
actgtctcccagagggtcttggccaccaacccagacatgaagaagagggcaaaagttcag
cacaacttcaaggtcacgtcagacggaagactcatcatcaaagaggacaatgacgaggga
gacaagactaaagatgatgagggagagatgaaagacattctggaggaggctggagtcaag
agtataaagactaagaggaggacattccgggatggtcactacgatgatgacatggagatt
gaaccccagctgaaatacaaagctggaggctcggggatccacagacctctgggtgggagc
agagacctggggggagactacaaggccaagaagggtaaaggagatgtgaagaggaaagga
aaggttgatccatatgcctacattcctctgaggaaagcacagctcaaccgcaggaagaaa
gcaaagatgcagggccagtttaaaggcatggtgagaggggcccagaagggagcgcagtct
gggaagaggatgcaaaggaacaagaggagggcctga
DBGET
integrated database retrieval system