Oncorhynchus gorbuscha (pink salmon): 124041491
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Entry
124041491 CDS
T07892
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124041491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124041491
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
124041491
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
124041491
NCBI-ProteinID:
XP_046215090
LinkDB
All DBs
Position
LG08:31067693..31136802
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AA seq
578 aa
AA seq
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MLPSQAGSAQSGNGSASFRDNTGHGSGVIGIRPVLVRARQSKTRVSDSISAVGMLGGNGP
GVGARGGARPGNGTGPTIPQTAAQGGIGLNMGIGVRGGSRYDPDKECAPMGCSGSDADSD
SGDEDDPMGSIGDNRRSVKRERLEMEAAVTGQEAGIPPGGYGVVPQGVAGAKPGKKTRGR
VKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ
PMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSESESLGETKDQL
KPAFTVASLPGTTSTHALTAPTTSTTMQVSSGPSFPITNYLAPISASSNVNGTVLKTTGV
SGGQVMQLPSGFTFMSAGTSLPPGTPTIPLSQLHQHTLAIPGQRGQKLTASQLTQQGQQA
VFRFPAAVSLGGGMTQQLQAIQVHPTTHTNDSSSEISQTSTVSTATIVTSSVPTSMAGHM
MYTSPHTVMYASSPSAMQVSHGHGQDTGETTLDYSRLRWDTGAVPQVFLTAPSGTMQIPV
SAVQLHPMVIGQQLNSSSSNLTELQVVSLDNTQNTKND
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaagccaggctggatcagcacaatctggaaacgggtcagcgtctttcagggat
aacacaggtcacggttctggggtgattgggattcgccctgtgttggtcagagcaaggcaa
tcgaaaactcgggtcagcgacagcatcagtgcggtggggatgttggggggcaacggtcca
ggagtgggtgcaagaggtggggcgagaccagggaacgggacgggaccgacgattccacag
accgctgctcagggaggcatcggtctgaacatgggaattggggttcgcggaggcagccgc
tacgaccctgacaaagagtgtgcgccaatgggttgcagtgggtcggacgctgattcagac
tcgggggatgaagacgatccgatgggttcaatcggggacaacagaagaagtgtaaagcgg
gagagactggagatggaggctgcggtgacagggcaggaggccgggataccaccggggggt
tatggtgtggtcccccaaggtgtcgctggcgcaaagccagggaagaagacacgtgggcgc
gtgaagataaaaatggaattcatcgacaacaagttgaggcgatacacaacttttagcaag
aggaagactggtataatgaagaaggcctatgagctttccacattgacaggaacccaggtc
ctgctactggtggccagcgagacgggccatgtctacacgtttgccacgcggaagctccag
cccatgatcaccagcgagacgggcaaggccctcatccagacgtgcctcaattctccagac
tcgcccccccgcaacgacccctccactgaccagcgtatgagcgccacaggcttcgaggag
acggaccttacctaccaggtgtctgagtcagagagccttggggagaccaaggaccagcta
aagcctgcgtttacagtggccagcctcccgggcaccaccagtacccacgcacttacggca
cccaccacatccaccaccatgcaggttagcagcgggccctccttccccatcaccaactac
ctggctcccatctccgctagcagcaacgtcaacggtacggtcctcaagaccaccggtgtc
tccggaggacaggtcatgcagcttcccagcggctttaccttcatgtcagcaggcacttct
ctccctcccggcacccccaccattccgctcagccagctgcaccagcacacactggccatc
ccgggacagcggggccagaagctcaccgcatcacaactgacacagcagggccagcaggcc
gtcttccgattccccgctgcagtctccctagggggagggatgacccagcagctgcaggcc
atccaggtgcaccccaccacacacaccaacgacagcagctcggagatctcccagacctcg
actgtctccactgcgaccattgtcacatcgtctgtgcccacgtccatggcggggcacatg
atgtacaccagcccccacacagtgatgtacgcgtccagcccctcggccatgcaggtgtcc
cacggacatggccaggacacaggtgagaccacgcttgactacagtaggctacgctgggac
acaggtgctgtccctcaggtattccttacggcaccctcgggcaccatgcagatccctgtt
tctgcagtgcagctacacccaatggtgattggtcagcagttgaacagcagcagcagtaac
ctgacagagctgcaggtggtcagcctggacaacacccagaacactaagaacgactga
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