Oncorhynchus gorbuscha (pink salmon): 124041518
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Entry
124041518 CDS
T07892
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124041518 (tbc1d4)
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124041518 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124041518 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
124041518 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4600
DUF4249
Spc42p
IRS
zf-C4H2
TMPIT
Motif
Other DBs
NCBI-GeneID:
124041518
NCBI-ProteinID:
XP_046215158
LinkDB
All DBs
Position
LG01:complement(70583483..70730866)
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AA seq
1275 aa
AA seq
DB search
MEGRDDKGNKESTLSKPDIQKFALWYIGWSSLDKRTTLPMLPWLVAEIRKKSEKNESGRD
TCSVQAREVQLVLTPPFIRCVPANNVANSSVFIFEHKAQFISRFIHNSNDLTYFAYLIRS
QPDNPESEMACHVFRAYDPNQVPEVISSIRAVSKSALKEDSKPKRDTEEAFYNSQKFEVL
YCGKVTIGHKKAPSTLIDDCINKFRQHELERKHLRLLNDQRGSTESAPIEFIMGDDGDPL
SSTTHSEGLEDPEGLEVDEVTNRGGSGGKIMSNSPSLGSLRGSFPECILEDSGFEEQQEF
RTRCSSLAGSLQRRPLEGALKAAPARRRHASAPNNVQPSDADKNRTMLFQVGRFEVNLIS
PDSKTVVLEKRFKDISSCSQGINKTDHFGFIFRDPGETGPGQYVCYVFQCASKSLVDEVM
LTLKQAFSTAAALQSAKTQVKLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLTDN
EQVDIFERVQRMKPVSDQEENELVILHLRQLCGTKQKSHLHIGEAQLKTANTTVPADSTA
ATGGRFKLDILKNKAKSSLTSSLENIFSRGANQMRGRLGSMGGSFERADDSPGDSPPGTP
PGFPDDDPDALQFRRRAHTFSHLPVKKRISFNDASTQGVQQGGTGTHSKALLRRQQSVNP
ELLQSSPVPTSRTRSVSESESNFSLSSSFSAPTFLKSFYQGSFGSMGSLADTRTLWSNGE
GRKRTLSGCSSDSVSAPLNIRKVSWRQKIFLRVASPMNKPTSMQHPDHCDVMDLLPLSPR
SFDPSLDPLASLLPTSGDTFTGKRPKRTAVHYRALWKTAIHQQILLLRMEKENQRLEASR
DELHIRKMKLDYQEVGTCIKDVLAFWDRKLSVPGRAKVVPLDKEEVHNAISKGVPKGRRG
EVWLLFSQQHRLRHRLPPGRHAPDTPYQDLLKQLTAQQHSILVDLGRTFPTHQYFSAQLG
AGQLSLYNLLKAYSLLDTEVGYCQGISFVAGILLLHMSEDQAFDMLKFLMYDLGFRRQYR
PDMTSLQIQMYQLSRLLHDYHRELYNHLEEHEICPSLYAAPWFLTLFASQFPLGFVARIF
DILFAQGSEVIFKVALCLLSSHEGEIVECDSFETIVDYLKTTIPNLTHTQMEETISKVLD
MDISKQLHAYEVEYHVLQDETVDAVLQSNDSDRLDKLEKTNNQLKKQNMDLLEKLQAARQ
KIQSLEATVENFLSRESKMKHMIRSLEQERQSYQKTIERMRSCLPPDALADVEMTHMVKP
AQGPNGKAKPTAKKP
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcgggatgacaaagggaataaagagagtactctctcgaagccagatattcaa
aagtttgctctctggtacatcggctggtcctccttggacaagcgtactaccctgcccatg
ctgccgtggttggtggcggagatccggaagaaaagtgagaagaacgaatcgggacgcgat
acttgttccgtccaggccagagaagttcaactggtgctcaccccgccgtttattcgatgt
gtgcccgccaacaatgtcgccaactcgtccgtcttcatcttcgagcataaagcgcagttc
atctcacgttttatccacaacagtaatgacctcacttatttcgcctaccttatccggagc
cagcccgacaacccggagtctgagatggcatgccatgtcttcagggcatacgaccccaac
caggtaccagaagtgatcagtagtatccgtgcggtgtctaagtcggccctaaaggaagac
tccaagcccaagcgggatactgaagaggccttctataactcccagaagtttgaagtgctc
tactgtggcaaggtgactatcgggcacaagaaggctccctccaccctcattgatgactgc
atcaacaagttccgccagcatgaattggagcgcaagcacctgcgcctcctgaatgaccag
cgaggatccacagaaagcgcccccatagagttcatcatgggggatgacggagaccccctc
tcctcaaccacccacagcgaggggctggaggaccccgaagggctggaggtggatgaggtc
actaacagaggaggttctggagggaagatcatgtccaacagccccagcctgggcagcctg
cgagggtccttccccgagtgcatcctggaggactctggtttcgaggagcagcaggagttc
cggacgcgttgtagcagcctggcgggcagtctgcagcggaggcccctagagggtgcgctc
aaagccgccccggcacgccgtcgccacgccagtgcccccaacaacgtccagccctcagac
gccgacaaaaaccgcaccatgctcttccaggtcggacgcttcgaggtgaacctgatcagt
ccagacagtaagactgtggtgctggaaaagagattcaaagacatctcgtcctgctctcag
ggtataaacaagacggaccactttgggtttatctttcgcgacccgggggagactggtccg
ggccagtatgtgtgctatgtcttccagtgtgccagtaaatccctggtggatgaggtgatg
cttactctgaagcaggccttcagtacggcagcagctctgcagagcgccaagacacaggtc
aagctgtgcgaggcctgccctatgcacgacctgcacaaactctgcgagaggattgagggt
ctgtatcctcccagggccaagctggccatccagaagtacctctctcaactgactgataac
gaacaggtcgacatctttgagcgagttcagagaatgaagcctgtgtcggaccaggaagag
aatgagctggtgattctccacctccgccagctatgtggaaccaagcagaaatcccacctc
cacatcggagaagcccaactgaaaaccgccaacacaaccgtaccagcggacagcacagca
gcgacgggcggccgcttcaaactggacatcctgaagaacaaggccaagagctcgctgacc
agctcactggagaacattttctcacggggcgccaaccagatgagaggtcgcctgggaagc
atgggggggagctttgagagagcggacgactctcccggcgactccccaccaggcacgccc
cctggtttccctgacgacgacccagatgccctccagttccggcgacgtgcccacaccttc
agccacctgcccgtgaagaagcgcatctcgttcaacgacgcgtccacccagggagtccaa
caggggggcactggtacccacagcaaggctctgctccgtaggcagcagtctgtcaacccc
gaactactgcagagcagccccgtgcccacctcgagaacgcgcagcgtgtcggagagcgag
tccaacttcagtctctcctcctccttctccgctcccactttcctgaaaagcttttaccag
ggctccttcgggtccatggggtctttggccgacaccaggaccctctggagtaatggggag
ggcaggaagaggacgctatctggatgcagcagtgacagtgtgagtgcacccctcaacatc
cgcaaagtgtcctggagacagaagatcttcctgcgggtcgcctcgcccatgaacaagccc
acctccatgcagcacccagaccactgtgatgtgatggacctgctgcccctctccccccgc
tccttcgacccaagtctggaccccctggccagcctactgcccacctcgggtgacaccttc
actgggaagaggcccaagaggacggcggtgcactaccgggccctatggaagacggcgatc
caccagcagatactgctgctacgcatggagaaggagaaccagagactggaggcaagtcga
gacgagctgcacatccggaagatgaagctggactaccaggaagtggggacatgcattaaa
gacgtgctagccttctgggacaggaagctgagcgttccgggcagagccaaggtcgtcccg
ttggataaagaggaggtccacaatgcaatctctaagggtgtccctaagggcaggcgtggg
gaggtgtggctcctcttctcccagcagcaccgcctgagacaccgtctgccccccggccgc
cacgccccagacaccccctaccaagacctgctgaagcagctcacggcccagcagcactcc
atactagttgacctgggtcggacgttccccacccaccagtacttctcagcccagctgggt
gcagggcagctgtccctctacaatctgctcaaggcctactctttgttagacactgaggtg
ggctactgccagggcatcagctttgtggcaggtatcctgctgttgcacatgagtgaggac
caggcctttgacatgctcaagttcctgatgtacgacctgggcttccgcagacaatacagg
cctgacatgacttctctacagattcagatgtaccagttgtccaggctgctgcacgactac
cacagggagctgtacaaccacctggaggaacacgagatctgccccagcctctacgcagca
ccatggttcctcacactctttgcatcccagttcccacttggattcgtcgcacggatattt
gatatcctatttgcccaggggagtgaagtgatctttaaggtggctctgtgtctactgagc
agtcacgaaggggagatagtggagtgtgatagcttcgagaccatcgtggactacctgaaa
actacaattcccaacctcacccacacccagatggaggaaaccatctcaaaggtgttggac
atggacatctcgaagcagctacatgcttatgaggtggagtaccacgtgctgcaggacgag
acggtggatgctgtgctccagtcaaacgactcagaccgtctggataaactggagaagacc
aacaaccagctgaagaaacagaacatggatctgctggagaaactacaggcggcacgacag
aagatccaaagcctggaggccactgtggagaacttcctgtcacgtgagtccaagatgaag
cacatgattcgctcgctggagcaggagcgccagtcctaccagaagactattgagcgcatg
cgctcctgcctgcccccggacgccctggctgacgtggagatgacccacatggtcaagcct
gctcaggggccaaacggcaaggccaagcccaccgccaagaagccctaa
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