Oncorhynchus gorbuscha (pink salmon): 124041522
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Entry
124041522 CDS
T07892
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124041522
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124041522
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
Ig_3
I-set
LRR_1
ig
LRR_14
LRR_EndoS
Ig_2
LRRNT
LRR_6
LRR_LRWD1
LRR_9
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
124041522
NCBI-ProteinID:
XP_046215164
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Position
LG08:34232488..34292602
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AA seq
627 aa
AA seq
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MTSRAMIGSPGPSVWSLMPWQWVSLWGPALLLVTIISLLPGSCQACPPRCECSAQIRSVS
CQRRRLTGIPEGIPTETRLLDLSRNRLRWVEMGDLAPYPHLEEVDLSENLIATLEPNAFS
NLQSLRVLQLRGNQLKLVPMGAFAKLGNLTTLDLSENKMVILLDYTFQDLRSLRHLEVGD
NDLVYISHKAFSGLLGLEDLTIEHCNLTSISGQTLSYLRSLVTLRLRHLSIAALEDHNFR
KLNNLRGLEIDNWPYLEYISPLSFQGLDLSWLSITNSNITSVPSSSFRNLIHLTHLNLSF
NPITTLEPWAFRELLRLKELIMVNTGLATVEPHSLGGLRQIRVLNFSSNELQTLEEGSFH
SVNSLETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPEEVQGYSLSTFTDSALF
DHFTCQKPKIRNRKLQQVTAREGQPVSFLCSAVGEPAPNIMWISPQRRIITAKSNGRITV
LPGGTLEIRYAQVTDSGTYMCIASNAGGNDTYFAMLTVRGAPLDAASAFFANRSLYGGEF
FNDTNLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFAWSRGRGQRKNNFTV
ETPFRKAEGPAATGSAGGARKFNMKMI
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcagggccatgattggctccccgggccccagtgtgtggtccctgatgccatgg
cagtgggtgagtctctgggggccggccctgctgctggttaccattatatccctgctgcca
ggtagttgccaggcgtgccccccgcggtgcgagtgctcggcccagatccggtcagtctcg
tgccaacggcggcgcctcaccggcatcccagagggcatccctacagaaacccgcctccta
gacctcagccggaaccggctccgctgggtggaaatgggcgacctggcaccgtacccgcac
cttgaagaagtggacttgagtgagaatctcattgccacgctggagcccaatgcgttctcc
aatctgcagagcctgcgggttttacagttgagggggaaccagctgaagctggtacccatg
ggggccttcgccaagctgggaaacctgaccacgctggatctgagtgagaacaagatggtg
atcctgttggactacaccttccaggacctgaggagtctgagacacctggaggtgggagac
aacgacctggtctacatttctcataaggccttttctggtcttctggggctggaggacctg
accatcgagcactgcaacctgacgtccatctctggccagacactgtcctacctacgcagc
ctggtcactctgcgattaaggcacctcagcattgccgccctagaagaccacaacttccgc
aagcttaacaacctgcgggggctggagatcgataactggccctatctggagtacatctcc
ccgctcagcttccaaggtctggacctgtcctggttgtccatcactaacagcaacatcacc
tccgtcccctcgtcctccttcaggaacctgatccacctcactcacctcaacctgtctttc
aaccccatcaccaccctggagccctgggctttcagggagctgctgaggctcaaggagctg
atcatggtgaacacgggcctagctacggtggagccccactccctgggcggcctcagacag
atccgggtcctcaacttctcctccaacgaactccagaccctggaggagggatcgttccac
tctgtaaacagcctggagacgctgcgggtggacgggaacccgctgctgtgtgactgccgt
ctgttgtggatcctgcagagacgcaagaccctcaactttgacggcagggtgcccgtgtgc
gctgggccggaggaggtgcaggggtatagccttagcaccttcaccgactcagcgctcttc
gatcacttcacatgccagaagcccaagatacggaaccgcaagcttcaacaggtgacggct
cgtgagggccagccagtgagtttcctctgcagtgccgtgggagagcccgcccccaacatc
atgtggatctcccctcagcgccgaataatcacagccaagagcaatggccgcatcactgtc
ctcccaggagggacgctagagatccgctatgcccaggtcaccgacagtggcacctacatg
tgcatcgccagcaacgccggcggcaacgacacctactttgccatgctcaccgtccggggc
gcgccgctggatgccgcgtcggctttcttcgccaaccgctcgctgtacggtggcgagttc
ttcaacgacacaaacctgaacagcacgcgcgtcttcctcaagttcaccctggacctgacc
accatccttgtctccacggctatgggctgcatcaccttcctaggcgtggtgctcttctgt
ttcctgttgttgttcgcatggagcagggggcggggccagcgcaagaataacttcacagtg
gagacccctttccggaaggctgaggggcctgcggccacgggtagtgccggaggagcccgg
aaattcaacatgaagatgatatga
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