Oncorhynchus gorbuscha (pink salmon): 124041582
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Entry
124041582 CDS
T07892
Symbol
carmil3
Name
(RefSeq) LOW QUALITY PROTEIN: capping protein, Arp2/3 and myosin-I linker protein 3
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124041582 (carmil3)
Membrane trafficking [BR:
ogo04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
124041582 (carmil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
124041582
NCBI-ProteinID:
XP_046215272
LinkDB
All DBs
Position
LG08:complement(37016711..37072941)
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AA seq
1460 aa
AA seq
DB search
MASKETTAAGFVHVGRENTESIRRLIDKQSIKFVRAVKQDTKHGKSEDRILVLATWRMYL
FAVKVPTKVEVTFNFLEIRVMNTYPDHQVVIDTDKSTHSLRLQSQDHLDHMMNHINFALS
RIFNNSMYAPTICRAEGDVSDGVLQFSPDSESSVETQRTCGGFSETYAALCDYNGIGCKE
EVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVMVASMAYNTWFTKLYCTDMRIGSEVVE
QVLHTISKSSSLEELTLENVGLKSDFPQKMATALSENPASAIHSLNLAHNTLDNQGVSNL
IQLVCRLNKGLRLLNLSKTSLSSKGVMSLSQALCSSDDYSNSLLHLDLSKNPGILSGEDA
TNMYLFLAQPNCLVHLDLSGTDCTVDSLFGALLRGCCVDLAYLNLSKNGFSHRKVRETLP
VVRQFFSSAFSLTHVNLSSMKLPPDTLRALFLGLSSNPHISDLHLDLSCCELRSAGAGVL
QELFPRVACIVSLDISDNGLDADLLGVIPAFSRHPSLKHLLLGKNFNLKGRVLDEILQKL
VQLVQEEECALQSLSLADSRLRSRGTVLVNALGSNTCLRKVDLSGNSLEDAGAKMLSKAL
QINTTLRSVTWDRNNTTATGFQDVARALEHNFTLHYMSIPLNDVTQAYRSAPEKIDQALT
KIQRALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVQQQVCALRGSEEGEELQ
AARQVLKEARNSRALYPSLCELAHVLSVDGPVRQKLDSLAGELAKAADKELQVIVDSMVS
LCRELCPMSSSSAERLSPPLSSVSERVSIPRSTIRTALMERAAQDINRALEDVKLSVVSY
LTNSIVDQILQELYTTHKTLLCQVSQAKRLDDAGTGRRTIRQSRITDSLDFPDEEGLGMN
IDTIAIKKRSSRTRRIRPVSTRLSLGDDPTSSPTHSGPLSRSASWEDLYTLPTQGAPLRH
VTQVRPRPPRRHCRGQVPVETHCSENGGVNVMEDGLPDFYSKRVLPDSQLSLLHQAQSLR
RKKRRSVLSIFAGFRKNRSSTISNQETDSGSENVYSMIQHPKDRGKGEAIIEVGANGRMM
PSPRPIQGTPLPGMRVGRPSPHCLTQRQPSDLVGMVYNCIGAEDEDSDSSFEIRPVGRDT
DRRKDTPIASDTQTESRANGHAMSSASLTDKQADIQADIQADRQTDRQTEPVCQDLPMPS
TRTDTQTEVERRTKETEGTESMEDRKEGAPCGQKPEPPSQSSKPSLASIKQRHLQGSSEK
STDGIGWTEGDRVEEENNEKRREGVQKERGAEGQRPPIPEKPGRDKTSPKTLPPVTPPEE
TTNEEKTTPPVPPASAKPSFDLSQAPVSQDEGTNETKSLPPVPPASTKPAFDSPDHAGCQ
DEEGGRNGCPLKPHRNRKADSCDMGMERNGPNDLERGSSDRKPPVKRPRLPENRNRSLDF
HRTVCPDSPEPANDNGMTSS
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagagaccaccgctgcaggtttcgttcacgtcggcagggaaaacacagag
agcatcaggaggctcattgataaacaatctatcaagtttgtgcgagctgtaaagcaggac
accaagcacggcaaatcagaggacaggatactggttctggcgacatggcgaatgtatcta
tttgctgtcaaagtccccaccaaggtggaggttactttcaacttcctggaaattcgagta
atgaacacttatccagatcatcaggttgtcatagacacagacaaatcgacccactccttg
agactgcagtcacaagaccaccttgatcacatgatgaaccatatcaactttgccctctca
cgaatattcaataactccatgtatgctccgaccatctgccgagcagagggggacgtctct
gatggagtcctccagttttcaccggactccgaatcatctgtagagactcagagaacctgt
ggcggtttctctgagacctacgcagctctgtgcgactataacggcatcggctgtaaggag
gaagtgcagtgggatgtggacactatctatcactctcaggacaacagggagttcaacctg
ctggacttcagccacctggacagcagggacctggcggtgatggtggcttccatggcgtac
aacacttggttcaccaagctctactgcacagacatgcgcattgggtccgaggtggtggag
caggtccttcacaccatcagtaagtccagcagtctggaggaactcactctggagaacgtt
ggcctcaaatcagacttccctcagaaaatggcgacagctctgtcagagaatcctgcctct
gcaatccactctctcaacctggcccacaacaccttggacaaccaaggagtgtccaacctc
atccagctggtgtgtcgtctcaacaaaggccttcgtctgctcaacctctccaagacgtcc
ctctcctccaagggagtgatgtctctctcccaggccctctgctccagtgatgactactcc
aactctctccttcacctggacctgagcaaaaaccctgggattctgtctggggaggacgcc
acgaacatgtacctgttcctagcccagccaaactgtctggttcatttggacctctctggg
accgactgcactgtggactcgttattcggcgctctgttgaggggatgttgtgttgatctc
gcttacctgaatctctccaagaacggcttctctcacaggaaagtgagggagactcttcct
gtcgtcagacagttcttcagttcagccttcagtcttactcacgtcaacctgtcttccatg
aagctccctccggacactctgagagctctcttccttggcctgtcttccaaccctcacatc
agtgacctacacctggacctcagctgctgtgagttgaggtctgctggtgctggggtgctc
caggagctgtttcccagagtggcctgtattgtcagtctggacatatcagacaacgggttg
gatgctgatctgctaggggtcatcccggccttctccagacacccttccctcaaacacttg
ctgctgggcaagaacttcaacctcaagggcagggtgctggatgaaattctgcagaaacta
gtgcagttagtgcaggaggaagagtgtgccctgcagtccctctctctggcggactcgcgc
ctgcgctctcggggcacagtgctggtgaacgctctgggcagtaacacctgcctgcgcaag
gtggacctgagtgggaacagcctggaggatgcgggggctaagatgctcagcaaagccctg
cagatcaacaccacactcaggagtgtgacgtgggatcgcaataacaccacggctacagga
ttccaagatgtggctcgggccctggaacataacttcaccctgcattacatgtccatcccc
ctcaatgatgtcacacaggcttaccggagtgcccctgagaagattgaccaagcgctgacc
aagatccagcgtgctctgttgaggaacaaccagacccagaggttctctcagaaacaggct
cttcgtctgcaccaaggcctggtcaccagcactgctgaacaggtgatggagcggctgtgt
gtgcgtgtgcagcagcaggtgtgtgctctccgaggctcagaagaaggagaggagttgcag
gctgccagacaggtcctgaaggaggccagaaactcccgtgcgctctatccatctctgtgt
gagctggcccatgttctctcagtggacgggcctgtcagacagaaactggactctctagca
ggagagctggccaaggctgctgataaggaactacaggtgatagtggactccatggtgtct
ctgtgtcgggagctgtgtcccatgtcctcctcctcggctgagcgactcagccctccgctc
tcctccgtctcagaacgtgtctccatccctcgctccaccatccgcaccgccctgatggag
agagcggcacaggacatcaacagagccctggaggacgtgaagctgtcggtggtctcctat
ctgaccaactccatagtggatcagatccttcaggagctctacaccactcacaaaaccctg
ctgtgtcaggtgtcccaggcgaagcgcttggatgacgcagggacaggcaggcgcaccatc
agacaatccagaatcacagactcactggacttccccgacgaggaaggcctgggcatgaac
atcgacaccatcgccatcaagaaacgtagctccagaaccagaaggattcgtccggtgtca
accagattgagtcttggtgatgatcccacctcctccccgactcactctggccccctatcc
cgctcagcatcatgggaggatctgtacaccctgcctacccagggtgcaccactgcgccac
gtgacacaggtcaggccacggcccccgcgaaggcactgtcgaggacaagtccctgtggaa
acacactgttcagagaacggaggagtcaacgtgatggaggatggactgccggatttctat
tccaagagagtcctgcctgacagtcagctgtcactactccatcaagctcagtccctgagg
aggaagaagagacgcagtgtgctgtcgatcttcgccgggttccgcaagaatcgcagctcc
accatctccaatcaggaaacagatagtggctcagagaacgtgtactctatgattcagcac
cctaaggatcgtgggaagggagaggccatcattgaggtgggggccaatgggaggatgatg
ccgtccccgaggcccatccagggcacaccactgcctgggatgagggtgggcaggccgagc
ccccactgcctcacacagagacagccttcagatctggtcgggatggtatacaattgtatc
ggagcagaagacgaggactcagatagtagctttgagatcagaccagtgggcagagacaca
gacagacggaaggacacgccgattgcatcagacacccagacagagtcccgtgccaatgga
catgcaatgtcctccgcttctctgacagacaaacaggctgacatacaggctgacatacag
gctgacagacagactgacagacagacagagccagtctgtcaggacctgccgatgcccagc
actcggacagacacacagacggaggtggagagacggacaaaggagacagaggggacagag
tccatggaggacaggaaggagggtgccccctgtggacagaaaccagaacccccttctcaa
agcagcaagcccagcctggccagcattaaacagagacacctgcagggaagctccgagaaa
tcaactgatggtataggatggacagagggagacagggtagaagaggagaataatgaaaag
agacgtgagggtgtgcagaaagaaagaggggcagaggggcagcggccccccattcctgaa
aagcctggtagagataagacctctccaaagacactgcctcctgtcactccgcctgaggaa
accaccaatgaggagaaaaccacacctcctgttccgcctgcctctgccaagccctctttt
gatttgtctcaagcccctgtcagtcaagacgaagggactaatgagacgaaaagccttcct
cctgtgcctcctgcttctaccaagcctgcgtttgactctcccgatcatgctggttgtcaa
gatgaggagggaggaagaaatggttgtccactgaagccgcatcgcaacaggaaggcagac
tcatgtgacatgggcatggaacggaatggccccaacgatctggagagggggtcctcagat
cgcaaaccccctgtgaaaagacccagactcccagagaacagaaacagatctctggacttc
cacaggactgtctgtcctgatagtccagagcccgccaacgacaatggtatgacgtcgtca
taa
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