Oncorhynchus gorbuscha (pink salmon): 124041626
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Entry
124041626 CDS
T07892
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03018
RNA degradation
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124041626
09123 Folding, sorting and degradation
03018 RNA degradation
124041626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124041626
03041 Spliceosome [BR:
ogo03041
]
124041626
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124041626
mRNA degradation factors
5'-3' decay
Lsm complex
124041626
Spliceosome [BR:
ogo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124041626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
GPAT_C
Motif
Other DBs
NCBI-GeneID:
124041626
NCBI-ProteinID:
XP_046215379
LinkDB
All DBs
Position
LG08:38227047..38231823
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AA seq
111 aa
AA seq
DB search
MADRNQDRNKEGEKKKKESIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTI
EYLRDPDDQFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQQQDG
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaaaccaggacagaaacaaggaaggagagaagaagaagaaagagagtatc
tttgacctgtcaaagtacattgataaacaaatccgtgtgaagtttcagggaggacgagag
gccagtggagtcctgaaggggtttgaccccctgttgaacctggtattggacagcaccatc
gagtacttgcgggatcctgacgaccagttcaagttgactgaggacacgcggcagctgggc
ctggtggtttgtagagggacgtccgtggtgctcatctgtcctcaggacggcatggaagct
atccccaaccccttcgtccagcagcaggacggatag
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