Oncorhynchus gorbuscha (pink salmon): 124041663
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Entry
124041663 CDS
T07892
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124041663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124041663
Spliceosome [BR:
ogo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124041663
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
124041663
NCBI-ProteinID:
XP_046215456
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All DBs
Position
LG08:complement(40944705..40962009)
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AA seq
478 aa
AA seq
DB search
MANNTVAANQQQPQAVSRIGPNAGKHGNNLPLWGNEKTMNLNPMVLTNVLSSPYFKVQLY
ELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFT
IKMTRKQVMGLITHNDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCV
MTIGEMVRSFLTKLEWFSTLFPRIPVPVQKLIDTQMKARPRKVPEKVEEPEEPPAEGRRR
SRSPRPTPSPRRTPKRSRSRSHHRERERHGPSFDRELERERDRQRKERDSGDGKGEERER
RRSRSADRTQERRERRRSRSGSRERKGEQKDREKDGQGCVENDRRKDREYHKDGGSERER
SKDQRSRGEVEDRRQKEERDERRGHREERKAKRSSRSASRERRHKKSIKRQVQEENRGGA
EVGEEKEKSRKKQCSREGEQRSHKHSRSKERSHRPREPSNGRDHGKHRECKMSQSTER
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacactgtcgccgcgaaccaacagcaaccacaggccgtgagcaggattggc
cctaacgctggaaaacatggcaacaacttgcctctctggggcaacgaaaagactatgaac
ttgaaccctatggtcctcaccaacgttctctcgtctccatatttcaaagtgcagctgtat
gaattgaaaacctaccatgaggtggtggatgagatctatttcaaggttactcatgttgag
ccctgggagaaaggaagtaggaagactgctggacagactggaatgtgcggaggggtgcgg
ggagtcgggaccggtggcattgtgtccacagccttctgcctgctgtataaactgtttacc
atcaagatgacccgtaaacaggtgatgggactgatcactcacaacgactcaccctacatc
agagcacttggctttatgtacataagatacacccagccccctgcagacctggtggactgg
tatgatggtttcctggatgatgaggaggagctggatgtgaaggccggaggtggctgcgtt
atgacaatcggagagatggtccggtcgttcctcaccaagctggagtggttctccactctc
tttccacgcatcccggtgcccgtgcagaagctgatcgacacgcagatgaaggcaaggccc
cggaaggttcctgagaaggtagaggagcctgaggaaccaccggcggagggccgtagacgc
tccaggagccccagacctaccccgagccccaggaggactcccaaacggtcgaggagccgg
agccaccaccgcgaacgagagcgccacggccccagcttcgaccgcgagctggagagggaa
cgcgaccgccagaggaaagagcgggactctggggacgggaaaggagaagagagggagagg
cgtcggtcccgcagcgcagaccgtacccaggagcgccgggaacgtcgcaggagccgcagc
gggagccgggaacgcaagggagagcagaaagacagggagaaagatgggcaggggtgcgtg
gagaatgacaggaggaaggacagggagtaccataaagatgggggcagcgagagggagcgg
tccaaggaccagaggagcaggggagaggtggaggacaggagacaaaaagaagagagagat
gagaggaggggtcacagggaggagaggaaggccaagcgctccagtcggagtgcaagcagg
gaaaggagacacaagaagtccataaagcgacaagtccaagaagagaacagaggcggggct
gaggtaggggaggagaaggagaagagcaggaagaagcagtgcagtcgggagggggagcag
cgctctcacaaacacagccgcagtaaagagcggagccatcggccacgtgagcccagcaac
gggagagaccacgggaaacacagggagtgtaaaatgagccagagcacagagcgttga
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