Oncorhynchus gorbuscha (pink salmon): 124041798
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Entry
124041798 CDS
T07892
Name
(RefSeq) rho GTPase-activating protein 21-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124041798
Membrane trafficking [BR:
ogo04131
]
Endosome - Golgi transport
Others
Others
124041798
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124041798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124041798
NCBI-ProteinID:
XP_046215786
LinkDB
All DBs
Position
LG08:complement(52181908..52268415)
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AA seq
1857 aa
AA seq
DB search
MMTSRWKGPFDEEERLTRPSLCKNDVPEWGDSPAGRFNLQGEEEPFSWPGPKTIHLRRTS
QGFGFTLRHFIVYPPESAVHPYPFPEEEHGRRGRQRNRLEPMDTIFVKQVKVGGPADGAG
LCTGDRIVKVNEESIIGKTYSQVIALIQNSDAFLKLCVMPRDEDILQLAYSQDAYLRGRS
AYSGIARHIPEPPPICYPRVDCKPPGMAQATETPSPVGVQGACRGHVGAPPPDLGYRIEI
PMPPSPPPAHPYSKSQTVACMRNNSVRTVVVPPELGHMGPAHRVEYGLVGPSDPGVIRGR
PGSVSHYPVPRKTDIYPSGASRLNYGAPPPHYPPNSNSPNPGSHQNIDWRTYQTYREYID
NKGIHAYGSRTIQERLDSLRAASQNTFNPTHYIPRGGWGPDPKGLRRRSTSHDRAYHGPP
PPFHHMPPRSSSQDRMSVAERGVHPRNWPPRSVSQDEFTHKARARSSDYVDPVNLGRPMV
DRRGYGSRADQGTCPSRQSLSKQAAHHRPPAGYGRDSLRVGPMSNPALQTTGPEQHQPHS
APNMLKDRPSHLGKNLSLEQSNTDERAGVNHVSQSRGSAETMQQPGEVPGRQVAAVVGRR
SSSLSAPHQRPQKPGIFKTSYQHPRPEPQVNGRGPSASESGVVLREKPPGSGKNPSPLRH
PSYILAVNEDDSSEPAASAVCWLPNDARREMHMRRLSEKQEKHQTGSSSNLDESLDSIPF
IDEPASPSVDHEATSIPASAVISVAPAITTAPPSPSSSPYPLMRRQLSHDQESLRNAILD
SDAETKQERSKSCDEGLDNYREEGRGRSNSKHMPSLRGLRKALDGHKSSDDSGSRRDSSS
DVFSDSSKEGWLNFRQINTEKSKRGGSRSWKQMYAVLRGHGLTLYKDKKDGVSHASSHSQ
SDDDPQPISVKACLIDISYSDTKRKNVLRLTTSDYEYLFQAEGRDDMLSWIRVIQENSNL
DDENAGITSQDLISRKIREYNTMMSAPSSKTEPSPKTSRQSLSIRHTLLGVKGEGKGQSP
HSPKTGERDESSPPRDKAAWRRGIPGIMRKPFEKKSTAGVTFGVRLDDCPPAQTNRFVPL
IVDVCCKLVEERGLEYTGIYRVPGNNAAISSMQEELDSKGLMSDIDIQEDKWRDLNVISS
LLKSFFRKLPEPLFTNEKYADFIEANRTEDSVERLKELKRLILELPDHHYETLKFLSGHL
KLVSENCEKNKMEPRNLAIVFGPTLVRTSEDNMTNMVNHMPDQCKIVENLIQQYDWFFTE
GDDDPVTSVEQESTVQSQPVPNIDHLLSNIGRTTTTSSPGEVSDSTCSDSSKSKQGLWGS
GKDQCSREMLLSSFFVSRKRKKPKDKTQPSSSDDDLDAVFDKKKEEPEPRHQALHPAWSP
ESQTKDEEERDVEDVSERGVQPGDRFQTNGKESRSDSLMSQPSPKHTPSFRTSSTCSPYA
SPSRSPRLGYRSQVAHQSSLSDPPSNYDEVSDLGTMDSTSSQASVRGPRVRHGRTGGLGP
ETGASGLGAEVSSITSDYSTTSSMTFLTGADLSTLSPEVCSVAESRGGDDDADDERSELI
SEGRPMEMDSESDLSVFVGGGKEAGPVEKICQSDVSDAPRPLPSHRLIECDTLSRKKSAA
RQKTDSESSLDGGRSDKDSTRLSCVPGAVKVRSIDSLSSSSRSELEVGADPAWRLKITDR
LKFRLLTSVDDMFGVGTQRSRSPEGRREKKKNIRRRHTMGGQRDFAELSVMGNWQEGGGS
RAELSAVDRLKPKCSSQDFSIREWIARERHRTSNPEVSLDFTEHQGAPLLFRSPDPNQAQ
EALSSSLSEPLSPRPAPAALLNGDAGPQNKSLSLSATAHPHKLSGAQVVHSRFYQYL
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgtcacgttggaaaggtccattcgatgaagaggagagactgaccagaccctct
ttgtgcaagaatgacgtgccagagtggggtgattcccctgcaggccggttcaacctgcag
ggagaggaggagcccttctcgtggccgggtcccaagactatccatctgcggcgcacttct
cagggcttcggcttcaccctgcgccacttcattgtctacccaccagagtctgcagtgcac
ccttaccccttcccagaggaagagcatggacgcagagggagacaacggaacaggctggag
ccaatggacaccatctttgtgaagcaggtgaaggtgggtggtcctgccgacggagctgga
ctctgcacaggagaccggatagtaaaggtaaatgaagaaagtatcattgggaaaacgtac
tctcaggtcatagccttgatccaaaacagtgatgcctttcttaaactctgcgtgatgcca
agagatgaagacatactgcagctggcctactcccaggatgcgtacctccgaggccgcagt
gcctacagtggaattgcccgtcacatccccgaacctccccccatatgttaccccagagta
gactgtaagcccccggggatggcacaggctacagagaccccctccccggtgggggtacag
ggagcatgccgggggcatgtgggggcaccaccacccgacctggggtaccgcatagagatc
cccatgcccccgtcccctcctcctgcacacccgtactccaaatcccagactgtggcatgc
atgcgcaacaacagcgtgaggactgtggtagttcctccagaactgggccatatgggacca
gctcatagagtagagtacggcctggtagggccctctgaccctggcgtcatcagagggcga
cctgggtctgtgtcccactaccccgtgccacggaaaacagacatctacccctctggtgcg
agccgcctcaattatggcgccccaccaccccactacccacccaactcaaactcccccaac
cccggctctcaccaaaacatcgactggcggacgtaccagacgtacagggagtacatcgac
aacaagggtatccatgcatacggcagccggaccatccaggagagactagacagcctgcga
gccgccagtcagaacaccttcaaccccacccactacatcccccgagggggctgggggccc
gaccccaagggtctccgacgcaggagcacctcccatgaccgtgcctaccacggacccccg
ccccctttccaccacatgccccctcgcagctcttcccaggaccgtatgagtgtggcggag
cggggggtccaccccaggaactggccccctcgtagcgtgtcccaggatgagtttacccac
aaggcccgggcccgctcctctgactatgtggaccctgtcaatctggggcgtcccatggtg
gacagacggggctatggtagcagggcggaccagggtacatgcccaagcaggcagagcctc
tccaaacaggctgcccatcatcgacctcctgcaggatacggtagggacagtctccgggtg
gggccaatgtctaaccctgccctccaaactacaggaccagaacagcaccagcctcacagt
gcccctaacatgctcaaagacagaccctctcatctggggaagaatctaagcttggagcaa
tccaacactgatgaaagagctggtgtgaaccatgtgagccagagtaggggatcagcagag
accatgcagcaaccaggggaggtgccagggagacaggtggcagcggtggttggccgtagg
tcctcttccctctccgctccccatcagagaccgcagaagcctgggattttcaaaacctct
taccagcaccctcgcccagagccccaagtgaacgggcgaggcccctcagcctccgagtca
ggcgtggtgctcagggagaagcctcctgggtcggggaagaatcccagtcccctacgccac
ccttcctacatcctggcggtgaatgaggacgacagctcggaaccggcagcgagtgcggtg
tgctggctgcccaacgatgcgcggcgggagatgcacatgcggcggctgagcgagaagcag
gaaaagcaccagaccggctcctccagcaacctggacgaatccctcgactccatccccttc
atcgatgagccggctagccctagtgttgaccatgaggccacgtccattcctgcttccgcc
gtgatatctgtcgctccagccataactacagccccccctagcccaagctcctccccgtac
cctctcatgcgccgacagctgtcacatgaccaagagtctctcagaaatgctattctggat
tctgatgccgagaccaaacaagagcggtccaaatcctgcgacgagggtctggataactac
agagaggaaggcagaggccggtcaaacagtaaacacatgcccagtctgagaggcctgagg
aaggctctggatggacacaagtcatctgatgactccggttccagaagggactcctcttca
gatgtattcagtgactcttctaaagaaggctggctcaacttcaggcagatcaacactgag
aagagcaagcgtggaggttcgaggtcgtggaagcagatgtatgccgtgctgcgaggccac
ggcctcacgctttacaaggacaagaaggacggcgtctcccacgcttcctcccactcccag
tccgacgacgacccacagccaatcagtgtcaaagcctgcctgattgacatctcctacagc
gacacgaaacggaagaacgtgctgcgtctgaccacgtcagactacgagtatctgttccag
gctgagggcagggatgacatgctgtcatggatccgagtcatccaggagaatagtaatctg
gatgatgagaatgctggtataaccagccaggacctgatcagcagaaagatcagagagtac
aacaccatgatgagtgcccccagcagcaagactgagccctcccccaaaacctcccggcag
tccctcagtatcagacacaccctcctgggggtgaagggagagggcaagggccagagcccc
cactcacccaaaacaggagagagagatgaatccagtcctccacgggataaggctgcctgg
aggaggggcatccctggcatcatgaggaaaccctttgagaagaagagcactgctggggta
acctttggggtgcgcctcgatgactgcccacctgcacagaccaacaggtttgttcccctc
atcgtggatgtgtgctgtaagctggtagaggaaagagggctagagtacactgggatctac
agagtaccaggaaacaacgctgccatctccagcatgcaggaggagctggacagtaaagga
ctgatgagtgacatcgacatccaagaagacaaatggagggacctcaacgtgatcagtagt
ttactgaaatccttcttccggaaacttccagagccccttttcacaaatgaaaaatatgca
gattttattgaagccaatcgaacagaagactcagtggagaggttaaaagaactcaagagg
ctgattcttgaattgcctgatcaccactatgaaaccctcaaatttctctctggacacctc
aagttggtctctgaaaactgtgagaaaaataagatggagcctcgtaacttggccatcgtg
tttggtccaaccctggtcagaacctctgaggacaacatgaccaacatggtcaaccacatg
ccagaccagtgcaagatagtggagaacctcattcagcagtacgactggttcttcactgag
ggggacgatgaccctgttacctcagtggaacaagagagtacagtgcagtctcagcccgtg
cccaacatcgaccacctgctgtccaacatcggccggaccacaaccacctcctcgcctggg
gaagtctcagattcaacgtgtagtgactcctccaaatcaaagcagggcttgtgggggtct
gggaaggaccagtgtagcagggagatgctgctctcttctttctttgtcagccgcaagcgt
aaaaagcccaaggacaagactcagcccagcagctctgacgatgacctggatgccgtgttt
gataagaagaaggaggagccagagccgcgccaccaggccctccaccccgcctggtcccca
gagagccagacaaaagatgaggaggagagggatgtcgaggacgtcagcgagagaggggta
cagcctggggacaggttccaaaccaacgggaaagagtcccgttcagacagcctcatgtct
cagccctctcccaaacacacccccagcttccgtacatcctccacctgctccccctatgcc
tcaccgtcccggtcccccagacttggctaccgcagccaggtagcacaccagtcttccctg
tcggaccctccctccaactacgacgaggtctcagacctgggcaccatggacagcaccagc
tcccaggcatctgtcagaggtcccagggtgagacatggcaggacggggggcttggggcca
gagactggggccagcggcctaggggcagaggtcagctccatcacctcagactactccacc
acctcctccatgaccttcctgacaggggccgatctgagcacgctcagtccagaggtttgc
tcggtggccgagagcaggggaggagacgacgacgctgatgatgagcgtagtgagctgatt
agtgagggccggcccatggagatggatagtgagagtgacctatcagtgtttgttgggggc
gggaaggaagcagggccggtggagaagatctgccaatcagatgtgtcggatgcccccagg
cccctcccctcccacagactcattgaatgtgacactctctccaggaagaagtcagcagcg
cggcagaagactgacagcgagtcctcattggacggagggcggagcgacaaggactccact
aggctgtcttgtgttccgggggcagttaaggtgcgttccattgacagccttagctcctcc
tcccgcagcgagttggaggtgggggctgatcctgcgtggcgtctcaaaattacagaccgg
ctgaagttccgtctgctgacgtccgtagacgacatgttcggggtgggtacccagcggagc
cgctctccagagggacgcagggaaaagaagaagaacatcagacgcagacacaccatggga
ggccagagggactttgctgaactgtctgtgatggggaactggcaggagggcgggggctcg
cgggcggagctatcggccgtggaccggctgaagccaaagtgttcttcccaggacttctcc
atccgggagtggattgcccgcgagcgccaccgcacctccaaccccgaggtcagcctggac
ttcactgaacaccagggtgcgccgctcctcttccgcagccccgaccccaaccaggcccag
gaggctctgtcgtcgtccctctcagaacccctctcaccacgcccggctccagctgcgcta
ctgaacggagacgcaggcccccagaataaaagcctgagcctgtcggccactgcacaccca
cacaaactctctggtgcccaggtggtccactctcgcttctaccagtacctgtga
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integrated database retrieval system
