Oncorhynchus gorbuscha (pink salmon): 124041925
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Entry
124041925 CDS
T07892
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03271
Virion - Rotavirus
ogo04145
Phagocytosis
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04514
Cell adhesion molecule (CAM) interaction
ogo04517
IgSF CAM signaling
ogo04518
Integrin signaling
ogo04530
Tight junction
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
ogo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
124041925
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124041925
04514 Cell adhesion molecule (CAM) interaction
124041925
04517 IgSF CAM signaling
124041925
04518 Integrin signaling
124041925
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
124041925
09144 Cellular community - eukaryotes
04510 Focal adhesion
124041925
04530 Tight junction
124041925
09142 Cell motility
04820 Cytoskeleton in muscle cells
124041925
04810 Regulation of actin cytoskeleton
124041925
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124041925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124041925
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124041925
04515 Cell adhesion molecules [BR:
ogo04515
]
124041925
04090 CD molecules [BR:
ogo04090
]
124041925
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
124041925
Exosome [BR:
ogo04147
]
Exosomal proteins
Proteins found in most exosomes
124041925
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin beta subunits
124041925
CD molecules [BR:
ogo04090
]
Proteins
124041925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
124041925
NCBI-ProteinID:
XP_046216058
LinkDB
All DBs
Position
LG08:59758591..59799432
Genome browser
AA seq
802 aa
AA seq
DB search
MDLRLLSIATLLGILCSCSAQQEGGDCIKANAQSCGECIQVAEKCGWCTDTDFLKQGESK
SARCDELQSLITKGCTKARIENPRGSTSINKNKAVTNRKKDMAEKLKADQITQIQPQKLT
LNLRSGEAQTFKLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMKEVTSDF
KIGFGSFVEKTVMPYISTTPARLLNPCTSTNNDTCTSPFSYKNVLKLTENGEEFNSLVSK
QQISGNLDSPEGGFDAIMQVAVCGDAIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPND
GKCHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVG
TLSSNSSNVIKLIIDSYNSLSSEVILENGKLPEGVSITYKSICKNGWVGTGENGRKCSNI
SIGDEVFFEIAIKSEKCPPQGKSETITIKPLGFTENVEIVLNFICECECSKDGKPLSEMC
HNGNGTFECGACRCNEGRIGRLCECSTDEVRTDDLDANCRKDNGTDICSNNGDCVCGTCE
CKKRENPEERYSGKFCECDNFNCDRSSNKLCGGHGRCECRVCICDANYTGSACDCSLDTS
TCLAANKQICNGRGTCECGVCKCTNPKFQGTTCEICPTCPGVCAEHKDCVQCRAFDTGEK
KDTCERDCSYFNLIRVKDRDKLPQPADQSYPLSHCKERDANDCWFYYTYAIRNHTEREVY
VVDTLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWD
TGVNPIYKSAVTTVFNPKYEGK
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaggctactttcaatagcaacattattaggaatattatgttcctgcagtgca
cagcaagagggcggtgattgcatcaaggccaatgcacaatcatgtggggaatgcatccaa
gtggcagagaaatgtggatggtgtacagacactgacttcctgaagcagggagagtctaag
tcagcacgctgtgatgagctacagtccctgatcacgaagggctgcactaaggccaggatt
gagaacccccggggcagcacctccatcaacaagaacaaggctgtcaccaaccgcaagaag
gacatggcagagaagctgaaggctgaccagatcactcagatccagcctcagaaactcacc
ctcaacctccgatccggtgaggcccagacctttaagttgaagttcaagagagcagaggac
taccccatcgacctctactacttgatggatctctccttctccatgaaagacgatttggag
aacgtcaagaatctggggactgacctgatgcgtgagatgaaggaggtcacctcagacttc
aagatcggtttcggctcctttgtggagaagacggtgatgccatacatcagcactacccca
gccagactgctgaacccctgcaccagcaccaacaacgacacctgcaccagccccttcagc
tataagaacgtgctgaagctgactgagaacggggaggagttcaacagcctggtcagtaag
cagcagatctctggaaacctggactcccctgagggaggattcgatgccatcatgcaggtg
gccgtctgtggggatgccattggctggaggaacgtcacacgtctgctggtgttctccact
gatgctggcttccactttgctggagacggcaagctgggcggcatcgttctgcccaacgat
gggaagtgtcatctggagaacaacatgtacaccatgagccattactacgactatccctcc
attgcccatttggtccagaaactgagcgacaacaacattcagaccatttttgctgttact
gaggaattccagcctgtttacaaggaactgaagaacctcatccccaagtcagcagtagga
actctgtcctccaactccagcaacgtcatcaagctcattatcgattcttacaactctctg
tcatctgaagtcattctggaaaacggcaaactgcctgaaggtgtatccataacatacaag
tccatctgcaagaacggttgggttggaacaggagagaatggaagaaaatgctcgaacatc
tccattggagatgaggtgttctttgagattgccatcaagtccgagaagtgtccgcctcaa
ggcaagtccgagaccattacaatcaagcccctgggttttactgagaatgtagagatcgtc
ctcaacttcatctgcgaatgtgaatgttccaaagatggaaaacctctcagcgagatgtgc
cacaatggcaacgggacctttgagtgtggagcctgcaggtgcaacgagggccgtattggc
agactgtgtgagtgcagtacagacgaggtgaggacggacgacctggacgctaactgtcgg
aaggacaacggtacagacatctgcagcaacaacggagactgtgtttgtggaacctgtgag
tgtaaaaagagagagaacccagaagaacgttacagtgggaagttctgcgagtgtgacaac
ttcaactgtgaccgctccagtaacaaactctgtggaggacatgggcgttgtgagtgcaga
gtgtgtatctgcgatgccaactacacgggcagcgcctgcgactgttccctggacacctcc
acctgcctagcagccaacaagcagatatgtaatggccggggcacctgcgagtgtggcgtc
tgcaaatgcaccaaccccaagttccagggcaccacctgtgagatctgccccacctgcccc
ggagtctgcgctgagcacaaggactgtgttcagtgccgggcctttgacacaggagagaag
aaggacacgtgtgagagggactgcagctacttcaacctgatcagagtgaaggaccgggac
aagctaccccagccagccgaccagtcctaccccctatcccactgtaaggagagggacgcc
aacgattgctggttctactacacctacgccatcaggaaccacacagagagagaagtctac
gtggtcgacactctggagtgcccagcgggtcctgacatcatccccattgtggctggcgtg
gtggcgggcatcgtgctgatcggcctggccctccttctcatctggaagctgctcatgatc
atccacgaccgcagggaatttgccaagttcgagaaggagaaaatgaacgcgaagtgggac
acgggagtgaatcccatctacaagagtgccgtaacaactgttttcaatccaaaatacgag
ggcaaatga
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integrated database retrieval system