KEGG   Oncorhynchus gorbuscha (pink salmon): 124041925
Entry
124041925         CDS       T07892                                 
Name
(RefSeq) integrin beta-1-like
  KO
K05719  integrin beta 1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03271  Virion - Rotavirus
ogo04145  Phagocytosis
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
ogo04514  Cell adhesion molecule (CAM) interaction
ogo04517  IgSF CAM signaling
ogo04518  Integrin signaling
ogo04530  Tight junction
ogo04810  Regulation of actin cytoskeleton
ogo04820  Cytoskeleton in muscle cells
ogo05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    124041925
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124041925
   04514 Cell adhesion molecule (CAM) interaction
    124041925
   04517 IgSF CAM signaling
    124041925
   04518 Integrin signaling
    124041925
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    124041925
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124041925
   04530 Tight junction
    124041925
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124041925
   04810 Regulation of actin cytoskeleton
    124041925
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    124041925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124041925
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124041925
   04515 Cell adhesion molecules [BR:ogo04515]
    124041925
   04090 CD molecules [BR:ogo04090]
    124041925
Membrane trafficking [BR:ogo04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    124041925
Exosome [BR:ogo04147]
 Exosomal proteins
  Proteins found in most exosomes
   124041925
Cell adhesion molecules [BR:ogo04515]
 Integrins
  Integrin beta subunits
   124041925
CD molecules [BR:ogo04090]
 Proteins
  124041925
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 124041925
NCBI-ProteinID: XP_046216058
LinkDB
Position
LG08:59758591..59799432
AA seq 802 aa
MDLRLLSIATLLGILCSCSAQQEGGDCIKANAQSCGECIQVAEKCGWCTDTDFLKQGESK
SARCDELQSLITKGCTKARIENPRGSTSINKNKAVTNRKKDMAEKLKADQITQIQPQKLT
LNLRSGEAQTFKLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMKEVTSDF
KIGFGSFVEKTVMPYISTTPARLLNPCTSTNNDTCTSPFSYKNVLKLTENGEEFNSLVSK
QQISGNLDSPEGGFDAIMQVAVCGDAIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPND
GKCHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVG
TLSSNSSNVIKLIIDSYNSLSSEVILENGKLPEGVSITYKSICKNGWVGTGENGRKCSNI
SIGDEVFFEIAIKSEKCPPQGKSETITIKPLGFTENVEIVLNFICECECSKDGKPLSEMC
HNGNGTFECGACRCNEGRIGRLCECSTDEVRTDDLDANCRKDNGTDICSNNGDCVCGTCE
CKKRENPEERYSGKFCECDNFNCDRSSNKLCGGHGRCECRVCICDANYTGSACDCSLDTS
TCLAANKQICNGRGTCECGVCKCTNPKFQGTTCEICPTCPGVCAEHKDCVQCRAFDTGEK
KDTCERDCSYFNLIRVKDRDKLPQPADQSYPLSHCKERDANDCWFYYTYAIRNHTEREVY
VVDTLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWD
TGVNPIYKSAVTTVFNPKYEGK
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggatctgaggctactttcaatagcaacattattaggaatattatgttcctgcagtgca
cagcaagagggcggtgattgcatcaaggccaatgcacaatcatgtggggaatgcatccaa
gtggcagagaaatgtggatggtgtacagacactgacttcctgaagcagggagagtctaag
tcagcacgctgtgatgagctacagtccctgatcacgaagggctgcactaaggccaggatt
gagaacccccggggcagcacctccatcaacaagaacaaggctgtcaccaaccgcaagaag
gacatggcagagaagctgaaggctgaccagatcactcagatccagcctcagaaactcacc
ctcaacctccgatccggtgaggcccagacctttaagttgaagttcaagagagcagaggac
taccccatcgacctctactacttgatggatctctccttctccatgaaagacgatttggag
aacgtcaagaatctggggactgacctgatgcgtgagatgaaggaggtcacctcagacttc
aagatcggtttcggctcctttgtggagaagacggtgatgccatacatcagcactacccca
gccagactgctgaacccctgcaccagcaccaacaacgacacctgcaccagccccttcagc
tataagaacgtgctgaagctgactgagaacggggaggagttcaacagcctggtcagtaag
cagcagatctctggaaacctggactcccctgagggaggattcgatgccatcatgcaggtg
gccgtctgtggggatgccattggctggaggaacgtcacacgtctgctggtgttctccact
gatgctggcttccactttgctggagacggcaagctgggcggcatcgttctgcccaacgat
gggaagtgtcatctggagaacaacatgtacaccatgagccattactacgactatccctcc
attgcccatttggtccagaaactgagcgacaacaacattcagaccatttttgctgttact
gaggaattccagcctgtttacaaggaactgaagaacctcatccccaagtcagcagtagga
actctgtcctccaactccagcaacgtcatcaagctcattatcgattcttacaactctctg
tcatctgaagtcattctggaaaacggcaaactgcctgaaggtgtatccataacatacaag
tccatctgcaagaacggttgggttggaacaggagagaatggaagaaaatgctcgaacatc
tccattggagatgaggtgttctttgagattgccatcaagtccgagaagtgtccgcctcaa
ggcaagtccgagaccattacaatcaagcccctgggttttactgagaatgtagagatcgtc
ctcaacttcatctgcgaatgtgaatgttccaaagatggaaaacctctcagcgagatgtgc
cacaatggcaacgggacctttgagtgtggagcctgcaggtgcaacgagggccgtattggc
agactgtgtgagtgcagtacagacgaggtgaggacggacgacctggacgctaactgtcgg
aaggacaacggtacagacatctgcagcaacaacggagactgtgtttgtggaacctgtgag
tgtaaaaagagagagaacccagaagaacgttacagtgggaagttctgcgagtgtgacaac
ttcaactgtgaccgctccagtaacaaactctgtggaggacatgggcgttgtgagtgcaga
gtgtgtatctgcgatgccaactacacgggcagcgcctgcgactgttccctggacacctcc
acctgcctagcagccaacaagcagatatgtaatggccggggcacctgcgagtgtggcgtc
tgcaaatgcaccaaccccaagttccagggcaccacctgtgagatctgccccacctgcccc
ggagtctgcgctgagcacaaggactgtgttcagtgccgggcctttgacacaggagagaag
aaggacacgtgtgagagggactgcagctacttcaacctgatcagagtgaaggaccgggac
aagctaccccagccagccgaccagtcctaccccctatcccactgtaaggagagggacgcc
aacgattgctggttctactacacctacgccatcaggaaccacacagagagagaagtctac
gtggtcgacactctggagtgcccagcgggtcctgacatcatccccattgtggctggcgtg
gtggcgggcatcgtgctgatcggcctggccctccttctcatctggaagctgctcatgatc
atccacgaccgcagggaatttgccaagttcgagaaggagaaaatgaacgcgaagtgggac
acgggagtgaatcccatctacaagagtgccgtaacaactgttttcaatccaaaatacgag
ggcaaatga

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