Oncorhynchus gorbuscha (pink salmon): 124041965
Help
Entry
124041965 CDS
T07892
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124041965
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124041965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
124041965
NCBI-ProteinID:
XP_046216137
LinkDB
All DBs
Position
LG08:63097071..63106504
Genome browser
AA seq
547 aa
AA seq
DB search
MESIVSDVAVGMKRGSDDLSLYSTSPNSVTANGNDSSKKLRVEDRMESPPSRVLHIRKLP
SEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVMPQVRNVPVF
IQFSNHKELKTDSTLNQRAQAVLQAVSAVQDGGSPNSDNSTLDSVLAHAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPALDPAMAAAYNKDSSLLGTPSGM
GAHYSNGGGFQSSLSLSQGGGAINPMSAAAAAAAAAGRMVLSGHSGCSGVLLVSNLNEEM
VTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMHGKIIRVTL
SKHQAVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVPFGLDRE
DVTEEDLRLLFSNAGGIVKAFKFFQGHKMALLQMSTVEEAIQALMDLHNYDMGSNHHLKV
SFSKSTI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcattgtcagtgatgttgcagttggcatgaagagaggctcagatgatttgagt
ctctacagcaccagccctaactctgtgactgctaacggcaatgacagcagtaaaaaactg
agagtggaggacaggatggagagtcccccttcccgcgtgctccacatcaggaagttgccc
agcgaggtgtcagagacagaggtcatcgctctgggcctaccgttcggcaaggtcaccaac
atcctcatgctgaaaggaaaaaatcaggcattcctggagttgggtacggaggaggcggct
gttaccatggtgaactactacacggcggtgatgcctcaggtccgcaacgtcccagtgttc
atccagttctctaaccacaaggagctgaagacagacagcactctcaaccagcgtgcacag
gctgtcctccaggctgtgtcggcagtgcaggatggtggctctcccaactctgacaacagt
acgctggacagtgttctagcccatgcccccagccctgtgctcaggataatcatcgacaac
atgttctaccccgtcactctggacgttctacagcagatcttctccaagtttggaacagtc
atgaagatcatcacgttcaccaagaacaaccagttccaggccctgctccagttcagtgaa
ccagtcaacgcccagcaagccagactgtccctggacggccagaacatctacaattcctgc
tgcacgctgcggatcgacttctccaagctggtcaacctgaacgtcaagtacaacaatgac
aagagccgggactacacccggcccgagctccctgccggtgacggccagcctgcactagac
cctgccatggccgccgcctataacaaggactcctccctgctcggtaccccctctggaatg
ggagcgcactactctaatggtggagggtttcagtcttctctctccctctcgcagggcgga
ggagccatcaatccaatgagtgctgcggcggcagcagcggcggctgcagggaggatggtg
ctatccggacactctggctgcagcggcgtgctcctggtcagcaacctgaacgaggagatg
gttacgccccaaagtctgtttaccctcttcggggtgtacggtgatgctcagcgtgtgaag
atcctctacaataagaaggacagtgctcttatccagatgtcagacgggaaccaggcccag
ctcgcgatgagccacctgaatggccagaagatgcacgggaagatcatccgtgtgactctt
tccaagcaccaggcagtgcagctgcccagggaagggctggatgaccagggcctaaccaag
gacttcaccaactcccccctgcaccggttcaagaagcccggctccaagaactttcagaac
atcttccctccttccgccacgctccacctctccaacgtccctttcggacttgacagggag
gatgtgacagaggaggatctgcgactgctgttctctaatgctgggggcattgtgaaggcc
ttcaagtttttccaaggccacaaaatggcacttctccagatgtccacggtggaggaggcc
atccaggccttaatggacctccacaactacgacatgggcagcaaccaccacctgaaggtc
tccttctccaagtcaaccatctag
DBGET
integrated database retrieval system
