Oncorhynchus gorbuscha (pink salmon): 124042024
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Entry
124042024 CDS
T07892
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124042024
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
124042024
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
Med4
DUF7310
DUF6775
IRK
Motif
Other DBs
NCBI-GeneID:
124042024
NCBI-ProteinID:
XP_046216246
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All DBs
Position
LG08:65571046..65623112
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AA seq
961 aa
AA seq
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MRHRYAGAVYQHQIPDEERGSAQSRDPNPNCPVFSLPPPPPSFRERSTTTSHYQNHELPC
LSQPSRRGIHASQPQHGEPPPLTNHDIAQRPSHRVCEPDGQPAHLKQNLWAAVGSQPQSE
QSVSQSCHCSFSEKANLSHQRQHLTHPPQPSLSLPPPPTSSSLLFLQESNRGEHFQSSAN
YQQASIVEHCRGGEGGGGYRDQKQLLQQHCQRLRHSDPSPEAIRTNSQKGRTVNLCESIE
ANRRAFESQAQDLQQLQQQPLLRAQQQLLVGSSLPINYCANGSGEVCRNNQASLLQQHQQ
QQDALGLCPQLPQHCDQDCNTPGRTNQANQSQQHCRDSRVNPPTQPYGGNSSATGSSSKS
SPNYGSSYHLWPESPHKGEERILIDHYQATTEQKKLSHAGSKPCLSESSGRLPQIAMNTC
KYNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPSKASNESLVR
DGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYGKES
SYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVC
AIHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSKLFTDAS
SRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDTQEVTSN
FLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEK
HVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQLRS
VKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEEKLDSVTGSLQAL
PCLISQAINQQQQEFLDGFLHRFRPTSLGSERSERSERSWTSTARRRRSPSTAPHTSSDS
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaagagcgaggc
agcgcgcagagccgagacccaaacccaaactgtccagttttcagtctgccgccccctcct
ccgtctttcagagagcgttcaactaccacctcacactaccagaaccacgaactgccttgt
ctgagtcaaccctctcggagaggtatccatgccagtcagccgcagcacggcgaaccccca
cctctgacaaaccacgacatcgcccagcgaccgtcacaccgggtctgtgaacccgacggg
cagccagcgcacctgaagcagaacctttgggccgcagtcggctcgcagccgcagtcggaa
cagtctgttagtcagagctgccactgcagtttttccgagaaggcgaacctttctcaccag
cgccagcacctcactcacccgccgcagccctccctatctttgccgccgccgccaacgtcg
tcctctttgctgtttttgcaggaatctaatcgcggggaacatttccaaagcagtgccaat
taccaacaggcgagcatcgtggaacactgcaggggaggagaaggaggaggagggtaccga
gaccagaagcagttgttgcagcaacactgtcaaagactccgacacagcgacccctcccct
gaagcaatccgaacaaactcgcagaaagggcgcacagtaaatctatgtgagtcaatcgag
gctaatcggcgagcattcgagtcccaggctcaggacctgcagcagctacagcaacagcca
ctattgcgagctcaacaacagctactggtggggagcagcttgcctatcaactactgcgcc
aacggctcaggagaggtatgtaggaataaccaggcatcactgctgcaacagcatcagcag
cagcaagacgcactggggctatgtccccagcttccgcagcactgtgaccaagactgcaat
acgccggggcgaacgaaccaagccaatcagtcgcaacaacattgccgcgactcccgtgta
aacccaccaacgcagccgtacggggggaactcgtctgcgactggcagtagcagcaagagc
agccctaactacggctccagctatcacctgtggccggagagcccgcataagggagaagag
cggatactaatcgatcattatcaggcaaccactgagcagaagaagctgagccatgctgga
tccaagccctgcctctccgagagcagcggccgactccctcagatagccatgaacacctgc
aagtacaatggtggcgtagtgagaccactgggcagcctggcgtcgtcgcggcgcaacctg
gcagagctcgactcggagacgcagcccctccagacgttgcacagctccggactggaggtg
gtggtatcaaagggcaacggcgaggaccccagcaaggcgtccaatgagagcctggtcagg
gacggtaacggtgctcctgtgaagaagaacaaggacattggctataggctcggccaccgg
agggcgctctttgagaaacggaagagactcagtgactacgccctcatctttggaatgttc
gggatcgtcgtcatggtgactgagactgaactgtcctggggagtttacggcaaggaatct
tcgtactcatttgcactgaaatgccttatcagcctttccactgttatattgcttggtctt
ataataatgtaccatgcccgggaaatccagctgtttatggtggacaatggggcagacgac
tggaggatagccatgacgtacgagcgcatcttcttcatcgtgctggagctgctggtgtgc
gccatccaccccatcccgggccattaccgcttcacgtggacggcgcggatcgccttcacc
tacactccgtcgacggccaacgccgacgtggacatcatcctctccatccccatgttcctc
aggctctacctgatcggccgcgtcatgctgctgcacagcaagctcttcactgacgcctca
tcgcgcagcatcggcgccctcaacaagatcaacttcaacacgcgcttcgtcatgaagacg
ctcatgaccatctgccccggcaccgtgctgctggtcttcagcatctcctcctggatcatc
gccgcctggacggtgcgagtctgcgagaggtatcatgacacacaggaagtgaccagtaac
ttcctgggagccatgtggctcatctctattaccttcctctccattggctacggagacatg
gtacctaacacgtactgtgggaaaggcgtatgtctgcttacagggatcatgggagctggc
tgcactgcactggtggtcgccgtggtagccaggaagttggagttgaccaaggctgagaag
catgtccacaacttcatgatggacacacaactctgcaaacgagtaaagaacacagctgcc
aatgtactcagggaaacatggctcatctacaaacacactaagttggtcaagaagatcgat
cacgccaaggtgcggaaacaccagcgcaagtttctacaggccatccatcaactgcgcagt
gtgaagatggagcagaggaaactcaatgatcaggccaacacgctagtagacctggctaag
acccagaacgtgatgtatgacctggtgtcggagctgcaggagcgtagcgaggaactggac
aagcggatcggcatgctagaggaaaagctggactcggtgacgggcagcctacaggctctg
ccctgtctcatctcccaagccataaaccagcagcagcaggaattcctggacggcttccta
caccgcttccggcccacctcactgggctcagagcgctccgaacgttctgaacgttcctgg
acctccaccgcccgccggcgtcgctctccctcaacggcgccgcacacctcttctgacagc
ggttag
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