Oncorhynchus gorbuscha (pink salmon): 124042031
Help
Entry
124042031 CDS
T07892
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124042031 (pif1)
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124042031 (pif1)
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124042031 (pif1)
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124042031 (pif1)
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
124042031 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
UvrD_C_2
AAA_22
DEAD
Herpes_Helicase
ABC_tran
Mg_chelatase
RsgA_GTPase
AAA_7
PhoH
AAA_16
AAA_5
Motif
Other DBs
NCBI-GeneID:
124042031
NCBI-ProteinID:
XP_046216263
LinkDB
All DBs
Position
LG08:66050366..66064390
Genome browser
AA seq
640 aa
AA seq
DB search
MMQGDDGAQLQCSVVVERLNSSGQATKRQVIRKAAVLLGRNEFQEIILRVHNGKVPESYT
LKEFQLFTRFAKDGKCTVKLLPENVQVLISDCPPHLLNIFLKTLSIKHQAWQTSKPMTDR
EKLKACLPRSFETISPLQQKDVQKANELRSKVNAPVLSKGLVVRTGNKMSGGPQGQQVKR
QRTDCDSSPLKALHPSKKPTLSLPAARKLNKEQAAVLSAVLSGKNVFFTGSAGTGKSFLL
KRIVGSLPPKSTYATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWT
SCRHLIIDEISMVEAQFFDKLEAIARCLRRSTEPFGGIHLIVCGDFLQLPPVSKEKDKAA
FCFQSRSWRKCIHLNMELTEVRRQTDQSFISLLQAVRVGRVTEEVTAKLIKSAYHKIERD
GILATRLCTHKDDVELTNDNKLQQLPGSVRVFEAVDSDPALVKTIDSQSPVSRLLQLKVG
AQVMLTKNLDVQRGLVNGARGVVVDFQPGKLGLPRVRFLCGTTEALKPERWMFKAGGGLY
LSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFERGQAYVALSRAKSLEGLRVMDFDP
HVVRADPDVLHFYSKLRKERLLLQASMNEFVGKSNKANRW
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaggggacgacggtgcccagctccagtgcagtgtcgtggtggagcgcctgaac
tcctctggccaggccaccaaacgccaagtcatccggaaggcagctgttcttctcggtcgc
aacgagttccaggagataatcctgcgcgtgcacaacggcaaagtgcccgaaagttacacg
ctcaaagagttccagctttttacccggtttgctaaggatggcaagtgcaccgttaaactg
ctccccgaaaacgtccaagtgctcatctctgactgcccgccccacctactaaacattttc
ctgaagaccttgagtatcaaacaccaggcctggcagactagcaaacctatgacagaccga
gagaagctgaaagcctgtctgccccgcagcttcgagaccatcagcccattacagcagaag
gatgtacagaaggccaatgagctgaggagcaaagtgaatgcaccagtgctctctaaaggt
ctggtagtgaggactggtaataagatgtctggaggaccacagggacagcaggttaagaga
caaaggacggactgtgactctagcccattgaaggcactccacccaagcaaaaagcccacc
ctgtctctaccggcggcacggaagttgaacaaagaacaagccgctgtcctcagtgctgtg
ttgagtgggaagaatgttttcttcactggtagtgcaggcacagggaagtccttcctgttg
aagaggattgtgggctctctgccgcccaagagcacctacgccacggccagcacgggcgtg
gcagcgtgtcacatcggggggaccacactacacaactttgcaggtatcgggtcaggctca
gcccctctggagcagtgtatagagctggcccagaggcccggggtcctgcagcactggact
agctgtcgccacctcatcatcgacgagatctccatggttgaggcccagtttttcgacaag
ctggaggcaatagcaaggtgtctgaggaggtccacagagccgtttggaggaatccatctg
atagtgtgtggggacttcctccagctgcccccggtctccaaggaaaaggacaaggccgcg
ttctgcttccagtctagaagctggcggaagtgcatccatctgaacatggagctgactgag
gtgcgcagacagactgaccagtctttcatctccctcctgcaggcagtgagggtgggcaga
gtcacagaggaagtcactgccaagttgataaagagcgcctatcacaagatcgagcgggat
ggtatcctggcaaccaggctttgcactcacaaggacgatgtagagctcactaatgacaac
aagctccagcagctgccagggtcagtgcgggtttttgaggctgtggacagcgaccctgca
ctggtgaagaccatagacagccagagtcccgtcagcaggctactgcagcttaaagtgggc
gctcaggtgatgctaacaaagaacctggatgtccagcgtggcctggtcaacggggctcga
ggtgtcgtggtggactttcagccggggaaactagggctcccacgtgtgcgtttcctgtgc
ggcaccactgaggcgttgaagccagaacgttggatgttcaaggccggaggcgggctttat
ctgagccgccagcagctgccactcaaactggcctgggcaatctctatccacaagagccag
ggtatgacgctggactgtgtggagatctccctggcgcgtgtgtttgagaggggccaggcc
tatgtggcgctgtctcgggccaagagcctggaggggctaagggtcatggactttgacccc
catgtggtccgtgccgaccccgacgtgctgcacttctacagcaagctgaggaaagagagg
ctactgttgcaggcttcaatgaatgagtttgtgggcaaaagtaacaaggcgaatcgttgg
tga
DBGET
integrated database retrieval system
