Oncorhynchus gorbuscha (pink salmon): 124042116
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Entry
124042116 CDS
T07892
Symbol
cfap57
Name
(RefSeq) cilia- and flagella-associated protein 57
KO
K24729
cilia- and flagella-associated protein 57
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124042116 (cfap57)
Cilium and associated proteins [BR:
ogo03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
124042116 (cfap57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WDR55
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
NBCH_WD40
ATG16
CC4_CEP85
Beta-prop_Nup120_160
YabA
TMF_DNA_bd
Lactonase
DUF1912
Motif
Other DBs
NCBI-GeneID:
124042116
NCBI-ProteinID:
XP_046216412
LinkDB
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Position
LG08:69224943..69263142
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AA seq
1219 aa
AA seq
DB search
MASVVAQCHYIFGLRTGVINNICYFDEQTVIFPCGNNCVRYNIDQRWQRFIPGTEKSQGM
QALAISANRRYLAVSERGEKGTITVYDLQHEQSRKRKVLSGGEVPVLEFVSMAFSPDSKY
LIGQAGAPDWTLFYWMWEKQKVMASVKTTGSTNPINQVSFNPQDNTQICVSGNGVFKLFR
YAEGALKQSNFLKLESHNFLSHTWMSEERVIAGTETGRLLVFESGDLRWEMSVTTKPATQ
EADRQLERRKPEEVKSEGAAPARMPRITAITSYSKGFACSAGPGTVCLFEKTEEKDNYRK
TREIRIPADPCSNEPSHAEQQEMVTLCISPSEETLVTSTDRGQLYSITLSSAEMSKGEQA
HFEFLSHSFHSNIITGLSICIRKPLIATCSLDHSVRIWNFETNVLELHKEFQEEAFSVAL
HPSGLFILVGFSDKLRLMNLLIDDVRTFKEFTVRGCRECVFSHGGHMFAAVNGNLIHIYS
STTFDNLLNLKGHNGKVRAIVWSTDDSRLVSCGMDGAVYEWNTLNSKRESESVLKSCSYT
GVTISPDAKTIFAVGTDCTLKEIQDCQILREVAADDVAYTTIAMSRSGRVLFAGTSIGTV
RAIKYPLSTQKDWIEYQAHSGAVTKMVITFDDQYLLTVSEDCCLLIWKIIDKEGRGLKRD
KDITYAEEILITKSDLEEKNQIMMELKTRVEELKMENEYQLRLKDMNYNEKIKDLSEKFV
QEIESLKTKNQVLKTEKEKQEMSHLEVTREVVEKHSREQQDFESTSNQKLMLEYEKYQEL
QLKSQLMQEGYERQLQAMEDSKGRALEELTLFYEAKLQEKMLMLGQCQDESRQQMREFEE
SKKQMEEDGDREIQDIRIKYERKLRVEKEINLRLKGETGVMRKKFSSLQKDIDDRNVEIE
KLRVEQQKLRGVIKSLEKDILGLKKEIQERDETIQDKEKRIYDLKKKNQELEKFKFVLDY
KIKELKKQIEPRENDIKEMKEQIQEMEGELDQVHKRNTQLELNITELKLKLKATDNEMHK
ETQRVRDVEALVRRFKTDLHNCVGFIQEPKRLKDSIRELYDHYVQQSDVVDIVGVDADIQ
REYSRQREHLERNVASLKRKLAKDTEVHRTENVKIMKENVSLIKEINDLRRELRLVRTQV
HDNKSQSSISKKKLSSSDLTALTSVEGRGLVARLNFEEEAERIIQLQRVEIQRLKMQMQG
QSHSLIPPSSSTKLPVLTT
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggttgtagcccagtgtcactacatcttcggtttgcggacaggagtaataaat
aatatttgctacttcgatgagcagacggtcatcttcccatgcggaaacaactgtgtgcgc
tacaacattgaccagagatggcagaggttcattccaggcacagagaaaagccagggcatg
caggccctggccatcagcgccaaccgccgctacctggccgtgtcagagcgtggtgagaag
ggcactatcaccgtgtacgacctgcagcacgagcagagccggaagaggaaggtgctcagt
gggggagaggtccccgtgctggaatttgtctccatggccttctcccctgactccaagtac
ctgatagggcaggcaggagcccccgactggaccctgttctactggatgtgggagaagcag
aaggtcatggcctcagtgaagacgacagggtccaccaaccccatcaaccaggtcagcttt
aacccgcaggacaacacccagatctgcgtgagtggcaatggggtcttcaagctcttccgc
tatgctgagggcgccctgaagcagtccaacttccttaagctggagtcccataacttcctg
tcgcacacctggatgtccgaggagcgtgtcatagcggggacagagacaggcaggctgctg
gtgttcgagtcaggtgacctgcgctgggagatgagcgtcaccaccaagcctgccacacag
gaggcagacagacaactagagaggagaaagccagaggaggtcaagtccgagggggcagcc
ccagcccgtatgcccagaatcacagccatcacgtcctactctaagggctttgcctgctct
gccggcccagggaccgtgtgtctgtttgagaagacagaggagaaggacaactacagaaag
actagggagatcaggatcccggcagacccgtgcagcaacgagccgagccatgcggagcag
caggagatggtcacactgtgtatcagcccgtcagaggagaccctggtcaccagtacagac
cgtggtcagctctacagcatcaccctgtcctctgctgagatgagcaagggggagcaagcc
cactttgagttcctgtcccactcgtttcactccaacatcatcacaggtctgtccatctgc
atccgcaagccccttatcgccacatgctccctggaccactccgtacgcatctggaacttt
gagaccaatgtgctggagctgcataaggagttccaggaagaggccttcagcgtggccctg
cacccctctggtctcttcatcctggtgggcttctccgacaagctgcgcctcatgaacctg
ctcatcgacgatgttaggaccttcaaggagttcactgtcaggggctgcagagagtgtgtt
ttcagtcatgggggacacatgttcgctgctgtcaacggaaacctcatccacatctactcc
tccactacatttgacaacctcttaaatctgaagggccacaatggaaaggtgcgggccatc
gtgtggagcacggacgacagtcgcctggtgtcgtgcgggatggacggggccgtgtacgag
tggaacacgctgaacagcaagcgcgagtcggagagcgttctgaagtcctgcagctacact
ggcgtcaccatctcgcccgatgccaagactatcttcgccgtggggacagactgtaccctt
aaggagatccaagactgtcagatccttagggaggtggcagcggacgacgtggcttacacc
accatcgctatgtcccggtcgggacgggtgctcttcgcagggacctccatcgggactgtc
agggccatcaagtaccctctatccacacagaaagactggattgagtaccaggcccactca
ggggctgtcaccaagatggtgatcacgtttgacgaccagtacctgctgacggtgtctgag
gactgctgcctgctcatctggaagatcatagacaaggagggccgtggcctgaagagagac
aaggacatcacctacgctgaggagatcctcatcaccaagtcagacctggaggagaagaac
cagatcatgatggagctgaagacccgtgtggaggagctgaagatggaaaatgagtaccag
ctgcgtctgaaggacatgaactacaacgagaaaatcaaggacctctcagagaagtttgtc
caagagatcgagtccctcaagaccaaaaaccaggtcctgaaaacggagaaagagaagcag
gaaatgtcccacctggaggtcacgagggaggtcgtggagaaacactccagagagcagcag
gatttcgagtcaactagtaaccagaagctgatgctggagtacgagaagtaccaggagctg
cagctcaagtcgcagctcatgcaggagggctatgagcggcagctgcaggccatggaggac
agcaagggtcgcgccctggaggagctcaccctcttctatgaggccaagctccaggagaag
atgctcatgctgggccagtgtcaggacgagtccaggcagcagatgagggagtttgaggag
tccaagaagcagatggaggaggacggagaccgggagatccaggacatccgcatcaagtac
gagaggaagctacgggtagagaaagagatcaacctacgcctgaagggagagacgggcgtc
atgaggaaaaagttcagcagcctgcagaaggatatagacgaccgcaacgtggagattgag
aagctgagggtggagcagcagaagctacgaggggtaatcaagtccctggagaaggacatc
ctgggcctgaagaaagagatccaagagagggacgagaccatccaggataaggagaagaga
atctacgacctgaagaagaagaaccaggagctggagaagttcaagtttgtcctggactac
aagatcaaagaactgaagaaacagatcgagcccagagagaacgacatcaaggagatgaag
gagcagattcaagagatggagggcgagctggaccaggtccacaagagaaacactcagctg
gagctgaacatcactgagctgaaactcaaactgaaagccaccgataatgagatgcacaag
gagacgcagagggtgagggacgtggaggccctggtacgcaggttcaagacagacctccat
aactgtgtaggcttcatccaggagcctaagaggttaaaggatagtatcagagagctctat
gaccactacgtccagcagagtgatgtggtggacatagtgggtgtggacgcagacatccag
agggagtacagtcgtcagagggaacacctggagaggaacgtggcgtctctgaagaggaag
ctggccaaagacacagaggtccaccggacagaaaacgttaagatcatgaaggagaacgtg
tctctgataaaggagatcaatgatctgaggcgggagctgcgtctggtgaggactcaggtc
cacgacaataagagccaatcaagcatcagcaaaaagaaactgagctcctcagacctcact
gcgctgacctctgtggaggggaggggtttagtggcgaggctgaatttcgaggaggaagcg
gagcgtatcatccagctgcagcgcgtggagatccagaggctgaagatgcagatgcagggc
cagagccactccctaatacccccctctagcagcaccaagctgcctgtactcaccacttga
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integrated database retrieval system
