KEGG   Oncorhynchus gorbuscha (pink salmon): 124042127
Entry
124042127         CDS       T07892                                 
Name
(RefSeq) collagen alpha-5(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
ogo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124042127
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124042127
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124042127
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124042127
   00536 Glycosaminoglycan binding proteins [BR:ogo00536]
    124042127
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   124042127
Glycosaminoglycan binding proteins [BR:ogo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   124042127
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 124042127
NCBI-ProteinID: XP_046216442
LinkDB
Position
LG08:complement(69783881..69851827)
AA seq 1657 aa
MRTALLCFALGVMLRGIEAKDCACTGKSMCHCEGVKGNKGERGFAGETGPPGSVGHPGSE
GHPGPVGPKGDVGPHGPPGTDGDRGPEGKEGFSATPGLPGIPGLQGPMGQPGSPGCNGTE
GERGATGPAGPSDGDDGLRGLPGAPGPKGESQMLIGFGQSGRPGLRGRDGDQGVHGVTGP
TGQQGDVGPRGVVGLLGLPGIPGFKGQEGRSSSIPGSRGPKGHQGPPGFPGPKGIKLYAH
APSDLKGETGDLGEKGCKGSPGYAGQVNLKEKGDQGGIGTEGRPGKDGRQGPAGYEGRKG
NPGLAGPDGIPGPRGQKGVQGQDGDPGEVTMIGCDVIGPKGRPGFTGPPGLPGVTGPPGA
TGFEGPPGSPGPNNGGDPYNRGAKGHSGPKGDEGDPGPIIQGEPGREGPQGTTGDLGPPG
PPGESDNLKGVIGPPGAKGAKGEQGYGGQYGSKGEKGEVCSLCTGKGSGEPGPPGSPGQP
GVPGFSAGPGPKGEPGLKGPSGSPGQQGLHGPSGVPGPPGPKGNSGSCNPQGIKGEKGAP
GPAGRSGLDGLYGAPGFRGRKGQQGPKGDPYDGPLGLKGDTGDPGPPGPQGYPGPDGSPG
PVGIGPLGPSGPKGNSGVPGLPGTPGYQGQKGEPCSSVADQGVPGLPGKAGLPGTRGPPG
PRGGAGNPGEKGDSGVFSTLGRRGPTGQKGDKGQPGRPSTSGSGYPGRPGVMGFPGAQGP
KGDAGFETLGPAGPKGFPGGVGAQGPPGDPGVLGRPGSPGPPGINGSSGPKGSKGVDGSQ
GLPGYAGTCCTEAPTGPPGLSGRPGLPGINGEMGSYGDPGTPGFGSSGPAGDPGPPGASG
PVVQGLTGQMGGRGRDGLPGASGPRGDPGLEGRSGPGPDGPPGPEGPPGLKGSVGPDGEK
GHSGVPGSVGDNGRPGPCGPSSDTVIHGPPGDPGIHGLPGFHGAKGHPGYPGPKGIDGRD
GDPGNGPRGCPGDPGADGLCSGGPGPSGLRGNMGLMGLPGPHGTQGGLGSNGDAGLDGRP
GPRGPKGTKGESSCAKPGLPGSPGQKGEPALNNKHDSKGMKGSPGYAGPPGSQGPSGAKG
DPGHHGAQGPAGQPGTDGPPGPPGLPASHGAPGQPGLPGPPGPYGPKGNQGHDGIPGPAG
QKGETLIVRSTPGPRGKNGLPGPKGDVGFPGPNPPGPPGCPGDQGHRGNEGPQGSPGRPG
FGGVCVNGLKGDAGSHGNPGSPGQRGPQGQPGSGGYECKGDRGDLGAPGGRGLDGPTGDL
GPPGLPGPGSIPGPPGPIGSPGHSGTPGVPGEMGEPSFNPGPKGPNGSRGPPGPPGCPGL
DVSVRPEKGDPGPPGYTGNQGPPGHSGLPGQPGLTGLPGPEGQQGLSPPGLPGFPGCKGD
KGSPGLTGPLGYRGSPGQKGPLGPRGSSTAGLADSFLLARHSQTIRVPDCPQGTALIYSG
YSLLFINGNKRAHGQDLGSIGSCLPRFSTMPFLFCDTDNTCRYAARNDYSYWLSTEKPMP
RSMDLIRGDEISSYISRCSVCEGSSNAMAIHSQTAQLPDCPGDWESLWTGYSFVMQTGAG
AEGSGQPLGSPGSCLEHFRQVPFIECHGRGTCNYFPDSYSFWLALLDPNHMFSKPVPQTV
KGPLLEKVISRCRVCRKPQSNDKSSQAQAITQNIWNI
NT seq 4974 nt   +upstreamnt  +downstreamnt
atgaggactgcgttgctttgttttgctttgggggtgatgctgcgaggaattgaggcgaag
gattgtgcgtgtactgggaagtccatgtgtcactgtgaaggagtcaaaggcaacaaggga
gaaaggggttttgcaggagagacgggtccacctgggtcggttgggcatccaggctcagag
ggtcaccctggacctgtggggccaaagggagatgtgggccctcatggacctccaggaaca
gatggcgatcggggacctgaaggcaaagaaggattttctgcgacaccaggtctaccgggc
atcccaggccttcaaggaccaatgggccaaccaggttccccaggatgcaatgggacagag
ggtgagagaggtgctactggtccagctggtccctctgatggcgatgatggattaagaggt
ttacctggagcacctggaccaaagggtgaatcccaaatgttaattgggtttggacagtca
gggagacctggactccgaggaagggacggtgaccagggtgtccacggggtaacaggaccg
acaggacaacaaggggacgttgggcctcgtggtgtcgttggattgctaggtctacccggg
atcccagggtttaagggtcaagagggacgcagctccagtatccctggctctcgtggtcca
aagggacaccaagggccccctggattcccgggacccaaagggatcaaactatatgcccac
gctccctccgatttgaagggggagacaggggatctgggtgagaagggctgtaagggttca
cctggttatgctggccaggtcaacttgaaggaaaaaggggaccaggggggcattggcact
gagggaagaccagggaaagacgggcgtcaagggcccgctggatatgaggggagaaagggg
aatcccggtttagcaggacctgatggaatacctggaccacggggacagaagggtgtccag
ggtcaagacggagaccctggggaggtgaccatgattggctgtgacgtaattggccccaaa
ggacgaccaggatttactggccccccggggctccccggggttactggtcccccaggtgcc
actggattcgaggggcctcctggttctccaggtcctaacaacggaggagatccctacaat
cggggagcgaagggccacagtgggcctaaaggggatgaaggagacccaggacccatcatt
cagggagagccaggcagggaaggcccacaaggaacaactggagaccttggaccaccggga
ccacctggagaatcagataatctgaagggtgttatcggacctccgggggcaaagggagcc
aagggagaacaagggtacggtggccaatatggatcgaaaggtgagaaaggggaggtctgt
agtttgtgtacgggaaaaggatctggagagccgggacccccaggttcccctggtcagcct
ggagtcccaggctttagtgcaggaccaggacccaaaggagagccaggactcaaaggaccc
tcgggatcacctggacaacagggtctccatggcccttcaggtgttccaggacctccaggg
ccaaaaggaaattcaggttcctgcaatccccaggggataaagggagagaaaggagcccca
ggaccagctggcagatcagggctggatggcctatacggggcccctggctttcgtggacgc
aagggccaacaaggccctaagggtgatccatacgatgggccactgggtctgaagggagat
actggtgacccaggccctcccgggccacagggatacccaggaccagacggttcaccaggt
ccagtaggcataggaccgcttggcccctcaggacctaaaggcaatagtggggtaccaggt
ctacctggtacacctggttaccaaggtcagaagggcgagccctgcagcagtgtggctgac
cagggagtcccaggcctaccgggaaaggcggggctgccgggcacacggggccccccaggt
cctcgtggtggtgctggtaacccgggggagaaaggggacagtggtgtattctccaccctg
ggaagacgaggacccactggacagaaaggtgacaaagggcagccgggacgcccaagtacc
tctggaagtggctatcctggacgacctggcgtcatgggattccctggggctcaagggcca
aagggtgatgctgggtttgagaccctaggtccagccggccctaaaggtttcccaggtggt
gttggggcccagggccctcctggagatccaggagtactgggccgaccagggagtccggga
ccacccggcatcaatgggtcttcaggtcccaaaggaagtaaaggtgtagatggttcccaa
ggacttcctggttacgcaggtacttgctgtactgaagccccaactggaccaccagggctg
tcaggcagacctggactcccaggtattaatggagagatgggttcatacggggaccctggc
accccggggtttggaagctcaggtccggctggtgaccctgggccccctggggcctccgga
cccgtagtgcaaggcctgactggacagatgggaggcagagggagagacgggttaccaggt
gcatcaggtcctagaggtgaccctggactggaaggaagatctggaccgggccctgacggc
ccacctggacctgaaggaccacccggtctcaaagggtcggttggccctgatggggagaaa
ggtcacagtggtgtaccaggctctgtgggggacaacgggcgcccaggcccttgtggacca
tcatccgatacagtcatacatgggcccccaggggaccctgggatacatggtctgcctggt
ttccatggtgctaaaggacaccctggatatcctggacccaaaggcattgatgggagggac
ggtgacccaggaaatgggccgagaggctgtccaggtgatcctggggctgatggactgtgc
tcaggaggaccaggcccatctggactcagaggaaatatggggctcatgggtctaccaggt
ccccatggaacacagggagggttgggttccaatggagacgcaggactagacggtaggccc
ggtccacgcgggccaaaaggaactaaaggagagtccagttgtgcaaaaccaggcctccca
ggatcacctggacagaagggcgaaccagccttgaataacaaacatgactccaaaggaatg
aaaggctctcctggttacgcaggtcctccaggctcccaaggaccttctggagccaaagga
gacccaggacaccatggagcccaaggtcctgctggccaaccaggtactgatggtccccca
ggccccccaggactccctgcatcacatggagctccaggacaaccagggttacctggccct
cctggtccctatggtcctaaaggtaaccagggtcacgatggcattcctggacctgctggt
cagaagggagagacactgattgtgagatcaactcctggcccacgtggaaagaatggactg
ccaggtccaaagggagatgtgggattccctggccccaaccctccggggcccccaggatgt
ccaggagatcagggccaccgaggcaacgaaggaccccagggttctcccgggaggccaggc
ttcggtggtgtttgtgtcaacgggctgaaaggagatgctggttcccatggcaaccctgga
agccctggacagcggggtccacagggacagccagggtctggaggctatgaatgtaaaggg
gacaggggagacctgggcgctccagggggcagaggcttggacgggcctacgggggacctc
ggacctccagggttaccgggaccaggatccatccctggacctccaggaccaatcggttcc
ccaggtcactctggaaccccaggagtccccggtgagatgggtgagcctagttttaacccc
ggcccgaaaggaccaaatggatccagaggcccgccaggaccaccaggttgtccggggctt
gatgtgtcagtgagacccgaaaagggggatccgggcccacccggttacaccggtaaccag
ggacctccaggtcacagtgggctgccaggacaaccaggattaacaggcctcccaggccct
gagggtcaacagggactcagccctccaggactgcctggcttccccggatgcaagggagac
aaaggatcgccaggactgacagggccgttgggctaccgggggtctccgggtcagaagggt
cctcttggcccacggggaagcagcacggcaggcctggctgacagtttcctgctggcccga
cacagccagaccatcagagtgcctgactgcccccaaggcaccgccctcatctactctgga
tactctctgctcttcatcaatggcaacaaaagggctcacggacaagacctgggctccatt
ggcagctgcctgcctcgtttctccaccatgcccttcctgttctgtgacacggacaacacc
tgtcgctacgccgcccgcaatgactactcctattggctgtccacggagaagcccatgcca
cgcagcatggacctgatcagaggagacgagataagcagctacatcagcaggtgttcagtg
tgtgagggcagctccaatgccatggccatccacagccagaccgcccagctcccagactgt
cctggtgactgggaatccctgtggactggatactcctttgtcatgcaaacgggtgcgggt
gctgaggggtcgggccagcctctgggctccccaggctcgtgtctagaacacttccgccag
gtccccttcatcgagtgtcacggccggggaacctgtaactacttccctgactcctacagc
ttctggctggccttgctcgaccccaaccacatgttcagtaagcctgtgccccagacggtg
aagggacctcttctagagaaggtcatcagtcgctgccgcgtatgcaggaaaccacaaagc
aatgacaaatccagccaggctcaagcgatcactcaaaatatttggaacatctaa

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