Oncorhynchus gorbuscha (pink salmon): 124042135
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Entry
124042135 CDS
T07892
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1-like
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124042135
Peptidases and inhibitors [BR:
ogo01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
124042135
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GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
TIP49
RuvB_N
Mg_chelatase
AAA_18
IstB_IS21
AAA_33
AAA_17
AAA_28
DUF815
nSTAND3
AAA_14
PhoH
AAA_lid_PRS2_C
AAA_7
Motif
Other DBs
NCBI-GeneID:
124042135
NCBI-ProteinID:
XP_046216458
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All DBs
Position
LG08:complement(70193093..70222228)
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AA seq
719 aa
AA seq
DB search
MFSLSTSVQPQVTIPLSHLINAVQYLKTAVGSSNAAAKPQHREHALEQDLQGTEPTWSLR
DLGLSDLGVGQLDELIRAMVPRLSQQGALSSSSPSQQAWGTSHLSSHSFFHNKHGFSGGK
MGTSYPVFCKQIPSPLQAVCTELRYWPVWIQNRGFKTLGKHKRLQAGFERPMESDGFTPS
FMKGLLTRDKGMEVETLDKLMKNKNIPDGQQDSFKTGFAEGFLKSQALTQRTQDSLRRTR
LVLLVLLLLGLYGLSKTPFLSVRFRTTSGLDSAVDPVHMKNVTFEHVKGVEEAKNELQEV
VEFLRSPEKFTVLGGKLPRGILLVGPPGTGKTLLARAVAGEANVPFYYASGSEFDEMFVG
VGASRIRNLFKEAKANTPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNE
GVIIIGATNFPEALDNALIRPGRFDMQVTVPKPDVKGRTEILNWYLRKIKVDPDVEAGII
ARGTVGFSGADLENLVNQAALKAAVDGKDMVTLKELEFAKDKILMGELCYQVELDKKNKE
ITAYHESGHAIVAYYTKDAMPINKATIMPRGPTLGHVSMLPDDDRWSETRAQLLAQMDVS
MGGRVAEEIIFGNEFITTGASSDFDAATRIAKMMVTRFGMCERLGVMTYTDQTKQSPETQ
AAIEHEVRKLLKDSYERARALLKSHAKEHQNLANALLQYETLDAREIKMVLEGKGLETR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttttcattgtcaacatccgtccaaccacaggtcactatccccctgagtcacctgatc
aatgccgtccaatacttgaagactgcagtgggcagcagcaatgccgctgctaaacctcag
catagagagcatgccttggaacaggacttgcagggcacagagcccacgtggagcctgagg
gacctgggcctgtctgacctgggcgtggggcagctggatgagctaataagagctatggta
ccacgtctgagtcaacagggggcgctgtcctcatccagccccagccaacaggcctggggg
acctctcacctctcctcacattccttcttccacaacaagcatgggttctctggtggtaaa
atgggcacctcctaccctgttttctgcaaacagatcccttcccctcttcaggcagtttgt
acagagctccgctattggccagtgtggatccagaacagaggctttaaaacactagggaaa
cacaagcgactgcaggcaggctttgagcgtcccatggaatcagatggctttacaccctcc
tttatgaagggcctcctgacgcgtgataaggggatggaggtggaaaccttggacaagctt
atgaagaacaagaatattcctgatgggcagcaagattctttcaagaccgggtttgctgag
ggcttcctgaaatcccaagctctgacacagcgcacacaagactctctgaggaggacgagg
ctggtcctgctggtcctgctgctcctgggactctacggcctctccaagacccccttccta
tcggtacgattccgaaccacatcaggcctggactcagcggtggaccctgtccacatgaag
aacgtgacgtttgagcacgtcaaaggggtggaggaggccaagaacgagctgcaggaggtg
gtggagttcctccggagcccagagaagttcaccgtcctcggagggaaactgccgagaggg
atcttgctggttggccctcctggtactgggaagactctgttggccagagctgtggctgga
gaagccaacgtaccattttattatgcctctggctctgagtttgatgagatgtttgtgggg
gttggagccagtcgcatcaggaacctcttcaaggaagccaaagcaaacacgccgtgcgtg
atcttcattgacgagttggacagcgttggagggaagaggatcgagtctcccatgcacccc
tactccagacagaccatcaaccagctactggctgagatggacgggttcaaaccaaacgaa
ggggtcattatcattggagcgacaaacttcccagaggctttggataacgctctgattcga
ccgggacgtttcgacatgcaggtcaccgttcccaagccagatgtgaaggggcgcacagag
atcctcaactggtaccttaggaagattaaagtagaccctgatgtggaggctgggatcatc
gccaggggaacagtgggcttctccggggccgacctggagaacctggtcaaccaagcggct
ctgaaggcggcggtggatggcaaagacatggtgaccctcaaagagctggagttcgccaag
gacaagatcctcatgggtgagctctgctaccaagtggaattagataaaaagaacaaggag
atcacggcgtaccacgagtctggccacgctatcgtggcgtactacaccaaggatgccatg
cccatcaacaaggccaccatcatgcccagaggacctacgctgggtcatgtgtccatgctc
ccagatgacgaccgctggagtgagacgcgtgctcagctgctggcccagatggatgtcagc
atgggaggccgcgtggctgaggagatcatatttggcaatgagttcatcaccactggtgca
tcaagtgactttgatgctgccaccagaattgcaaaaatgatggtgaccagatttggtatg
tgtgagaggctgggtgtcatgacctacactgaccaaaccaagcagagcccagagacacag
gctgccattgaacacgaagtcaggaaacttttaaaggattcgtacgagcgggccagggct
ctcctcaagtctcatgcaaaagaacaccagaacctagccaatgccctgttgcaatacgag
acgctggatgccagagagatcaagatggtcctggagggcaagggcctggagacaagatga
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