Oncorhynchus gorbuscha (pink salmon): 124042221
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Entry
124042221 CDS
T07892
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03020
RNA polymerase
ogo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124042221
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124042221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124042221
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124042221
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124042221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
124042221
NCBI-ProteinID:
XP_046216597
LinkDB
All DBs
Position
LG08:656877..683818
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AA seq
790 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLPYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLEMPCFHVGYFKATIGILQMICKTCSHIMLTKE
EKLQFMDVLKRPGLAYLQKRGMKKKISDKCRKRTLCLNCSTLNGPVKKCGLLKILHEKYK
TTKKVVDTVVSDFLNSFDIAIEHNKEVEGLLNRAQENLSPLVVLNLFRRIPAEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVISDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLEMLRKLVRSGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGVDERIKIALPHPAILKPMTLWTGKQI
FGLILKPSKACPVKANLRTKGKQYSGKGEDLCSNDSFVVIQNSELMCGTMDKGTLGSGSK
KNIFYILLRDWGQLEAANAMSRLARIAPTYLSNRGFSIGIGDVTPGQGLLKAKQDLLDGG
YAKCDEYIEALKTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKTNSPLIM
ALCGSKAQTS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagagcagtttagagagactgatgtggccaaaaaaataagccacatctgtttt
gggatgaagtcggctgaacagatgagacagcaggctcatatccaagtggtcagtaagaac
ctgtacagccaggacaccagccatactcctctaccgtacggagtactggatcatcgcatg
ggcaccagtgagaaggatcgtccttgtgagacgtgtgggaagaacctggctgactgtctg
ggacactatgggtatctggacctggagatgccctgttttcatgtgggctatttcaaagcc
accattggaatcctacagatgatctgtaagacgtgttctcacatcatgctgaccaaagag
gagaaactgcagttcatggatgtgttgaagaggcctggactagcgtacctacagaaacga
ggaatgaagaagaagatatccgacaaatgccgcaaaaggacattgtgtctcaattgctcc
acgttaaatggaccagtgaagaagtgtggcttgctgaagatcctccacgagaaatacaag
acaaccaagaaagtggtggacactgtagtatcagactttctcaactcattcgatatcgca
atagaacacaacaaagaagtggagggcttgcttaacagggctcaggagaacctgagtcct
ctagtggtgctgaacctcttcaggaggataccagcggaggacattcccctgctcctgatg
aaccctgaggcaggtaagcctgcagacctcatcctcacccgcctgctggtacctccgctc
tgcatccgcccctctgtcatctcagacctcaagtcgggtactaatgaggatgacctcacc
atgaagctcacagagatcatcttcctcaatgatgtcatcaagaagcaccgtatgtcaggg
gccaagacccagatgatcatggaggactgggacttcctccagctgcaatgtgctctctac
atcaacagtgagctctctggcatccccctcaacatggcccctaagaagtggaccagaggc
ttcgttcagagactcaagggcaaacaagggcgattccgtggaaacctctcggggaagaga
gtggatttctctgggagaacggtcatctctccggaccccaacctgcggattgatgaggtg
gctgtccctgtgcacgtagccaaaatcctgacctacccagagaaggtgaacaaggccaac
ttggagatgctgaggaagctggtgcggagcggtccagaggtccaccctggagccaacttc
atccagcaacgacacacgcagatgaagaggtttctgaagtacgggaaccgagagaagatg
gcccaggagctgaagtttggagacgtggtggagagacacatgatcgatggagacatcgtc
ctcttcaaccgacagccctctctacacaaactcagcatcatggctcatattgccaaagtg
aagcctcacagaacgttccggtttaacgagtgtgtgtgcacgccgtacaacgctgacttt
gacggggatgagatgaaccttcaccttccccagacagaggaggccaaggctgaagccctg
gtgctgatggggaccaaagccaacctggtgacccccaggaacggagagcctctgattgct
gctattcaagactttctgacaggagcctacctgttgaccctgaaggacacattcttcgat
aggtctaaagcctgccagatagtggcctctatcctggtgggggtggatgagaggatcaag
atagctctcccacaccctgccatactcaagcccatgactctgtggacagggaagcagata
tttggtctgatcctgaagcccagtaaggcctgtccagtcaaggccaacctgaggaccaag
gggaaacagtacagtgggaaaggagaggacctctgcagcaacgactccttcgtggttatc
cagaacagtgagttgatgtgtggtaccatggataagggcacgttgggctctggctccaag
aagaacatattctacatcctgctgagagactggggacagctggaggcagccaacgccatg
tctcgtctggcccgcatcgcccctacatacctctccaaccggggtttctccatcggtatt
ggtgacgtgaccccaggccagggtctgctgaaggccaaacaggacctgctggatggaggc
tatgccaagtgtgacgagtacatcgaggccctgaagacaggcaaactgcagcagcagccg
ggctgcacggctgaggagacgctggaggccctcatcctgaaggagctgtctgttatcaga
gaccatgccggcagcgcctgcctcagagaactggacaagaccaacagtcctctgattatg
gctctgtgtggctccaaagctcagacttcctga
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