Oncorhynchus gorbuscha (pink salmon): 124042257
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Entry
124042257 CDS
T07892
Name
(RefSeq) LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124042257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124042257
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124042257
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
124042257
NCBI-ProteinID:
XP_046216625
LinkDB
All DBs
Position
LG08:21463575..21524578
Genome browser
AA seq
795 aa
AA seq
DB search
MSSYNISLSGPAPWGFRLQGGKDFNMPLTISRITPGSKAQQGNLIQGDIIVAIDGVSTEG
MTHLEAQNKIKSASFNLALTMQKSKRPFPLSTSTQRMDSPMQQIPHQKVISNTPANNEYV
PSFNPIALKDTALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSKGHEA
GEEVPAGSPLASLPVKDAQVDSASPVYQAVIKTADRDTELNDWARSSSQVQSKSFRLLAH
ITGTEFMQDPDVEHLRKSREKFDTEFKGPRFAKLKNWHNGLSAQILNLPEKAVVYSPVEH
APVSTSPTHVALPASAASPNQAASPTAAYQSPEPAPVDPEPTPESNPCVCGVSPKPSLKP
LLLTLVKKLGLEARATSHPVPNQHFAEMKVLSSGSRTEHLSLYGQAPPMQKAPPMYQGQS
MYQGLCMQKGPPMQQGPSMYQGPAMQQGPPMYQGPPMHQGPPMYQGPPMHQAPPMQQHPM
QQSSIQIPVGPPPPKVVSTACIVPAPAPVPTPATAPAAPEPPYSRPPWITDNSFANKFDP
SKSTSTSMKVPALPQSAPPAPAYIPNPGSAHAPPSSPSPAYNPSPAPYNPAPAPFPPIAR
GVAQRAERFAANSSRAPLCGACNNMIRGPFLVALGRSWHPEEFNCHYCHTSLADCSFVEE
QNAVYCENCYGEFFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAACGNAFGNSLFHMED
GEPYCEKDYISLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSK
KDKPLCKKHAHAINV
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctacaatatttctctgagtgggccggccccatggggcttccgattgcaggga
ggcaaggacttcaacatgcccctgaccatctccaggatcaccccagggagtaaggcacag
cagggcaacctgatccagggtgacatcatcgtggccatcgacggggtcagcactgaaggc
atgacccacctagaggcccagaacaagatcaagtctgccagcttcaacctggccctcacc
atgcagaagtcaaagcgcccatttccactttccacatccacccaaagaatggattctccc
atgcaacagatccctcaccagaaggttatttccaacactcctgccaacaacgagtatgtg
cccagcttcaaccccattgcgctgaaggacactgccctgtccacccacaagcccatcgag
gtgaagggtcctgggggcaaggccaccataatccatgcccagtacaacacccccattagc
atgtactcccaggacgccatcatggacgccatcgccggacagtccaagggccacgaggcc
ggagaggaagtcccagctggctcccccttggcttcgctcccagtaaaagatgctcaggta
gacagtgcctccccagtttatcaggctgtgatcaagactgcagacagggacacggagttg
aatgactgggcccgcagctcctcccaggtgcagtccaagtccttccgcctcctcgcccac
atcacgggaacggagttcatgcaagacccagacgtggaacatctgaggaaatcaagggaa
aagtttgacacagaatttaaaggtccacgttttgccaaattgaaaaattggcacaatggc
ctgtctgctcaaatccttaacctgccagaaaaagccgtggtttatagccctgttgagcat
gctccagtttccaccagccccacacatgtcgctctccctgctagcgctgcttcgcccaat
caggcagcttcgcctactgctgcttaccagtctccagagcctgcccccgtagaccctgaa
cccacccctgagagtaatccatgtgtatgtggagtgagccctaaaccgtctctcaaacct
ctcttgttgactctcgtcaagaaactaggtttagaagcaagggccacctcccacccggtt
ccgaaccagcactttgccgaaatgaaagtcctgtcctcgggttcccgaactgagcacctg
agcctatatggccaggctccccccatgcaaaaagcccctcccatgtaccaggggcaatcc
atgtaccaagggctttgtatgcagaagggacctcccatgcagcagggaccttccatgtac
caggggcctgctatgcagcagggacctcccatgtaccaagggcctccaatgcaccaggga
ccacccatgtaccaggggccccccatgcaccaggccccgcctatgcagcaacatcccatg
cagcaaagctccatccagatccctgtgggccctcctccacccaaggtggtcagcacagcc
tgcattgtgccagctccagcccctgttccaaccccagccacagccccggccgcccctgaa
cccccctacagcaggccaccctggatcacagacaactcttttgccaacaagtttgacccc
agcaagagcaccagcaccagcatgaaagtgcccgctctacctcagagtgccccaccagca
ccggcctacatcccaaaccctggctccgcccacgcccctccctcctccccaagccctgcc
tataatcccagccctgccccctacaaccccgcccctgcccccttccctcccattgcccgg
ggcgtagcccaaagggcggagcgctttgctgccaatagcagcagagcacccctctgtggc
gcttgcaacaacatgatccggggacccttcctggtggccttgggtcgctcctggcaccca
gaagagttcaactgtcactactgccacacatcgctggcagactgcagctttgtggaggag
cagaacgcagtgtactgtgagaactgctacggagagttctttgcccccacctgtgcacgc
tgcaacaccaagatcatgggggaggtgatgcatgctctgcggcagacatggcacaccacc
tgctttgtgtgtgctgcctgtggcaatgcctttggaaacagcctattccacatggaggat
ggggagccttactgcgagaaagattacatttcacttttcagcaccaaatgccatggctgt
gacttcccagtggaagcgggagacaagttcattgaagcactgggtcatacctggcacgat
acctgctttgtctgtgcagtgtgccatgtgaacctggagggccagcccttctactccaag
aaagacaagcccctgtgcaagaagcacgctcacgccatcaacgtgtaa
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