Oncorhynchus gorbuscha (pink salmon): 124042897
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Entry
124042897 CDS
T07892
Symbol
col28a2a
Name
(RefSeq) collagen, type XXVIII, alpha 2a isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124042897 (col28a2a)
Peptidases and inhibitors [BR:
ogo01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
124042897 (col28a2a)
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
124042897
NCBI-ProteinID:
XP_046216988
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Position
LG01:78204059..78242934
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AA seq
1277 aa
AA seq
DB search
MLFPAVTWFLLVAGLLSVWAQDYYEERTVNKRPRGRGAQLQAPAIATNVQKHNGQAILDE
DCGLELTFLLDSSESAKENHEQEKRFAMDVVDRLQAARLQTGRSLSWKAALLQYSSHVII
EQTFKQWKGTDNFKSHITPIVYIGHGTYTTYAITNMTKMYLEESSPGNIKVAMLLTDGIS
HPRNPDIFSAAADAKNQGVKFFTVGITRAANESANVAQLSLLASSPASRYLHNLQDIDIV
EKVLKEITDLADEGCPPAQQCACEKGERGLSGLAGKKGRPGDDGAPGLKGLKGEGGLSGL
PGRDGGEGKSGYKGERGERGECGTPGIKGDRGPEGPMGTRGVRGLQGLPGPQGDVGPEGP
QGNKGDRGQAGPAGIQGENGIGLPGPKGDLGFQGKPGPPGPTGLSEYGQPGPQGPQGFQG
EKGPHGEGLPGPKGDRGLAGPRGPRGQTGAGIKGEKGEFGPPGHPGLVGLTGAGIQGEKG
VEGPRGPPGGRGPQGEGLPGPKGDQGFPGELGATGERGVGVPGPKGELGTSGLAGLPGLP
GEDGAPGQKGEAGVAGIRGPDGAAGIGTQGEKGDQGQRGIRGLHGPPGMTGPSGAKGEPG
TPGRLGMPGLPGRAIAGPKGDLGPPGPSGPTGETGYGLPGPKGDRGHPGPSGPFGSKGEG
FPGPVGPPGLPGLQGEQGPEGIGIPGPKGDIGFRGLPGLPGPKGKGVQGPPGNIGRKGPP
GPNGPPGEGLQGPKGEQGSQGVTGPRGPIGEGFPGGKGDRGLQGERGNKGVKGGMGDSGV
PGESGRPGVKGEVGLTREDIIKLIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIK
DFVTALVDRTTVGRNATRIGLVLYSLDVHLEFNLARYMTKQDVKQAIRKMSYVGEGTYTS
TAIRKATQEAFYSARTGVRKVAIVITDGQTDKREPVKLDIAVREAHAANIEMYALGIVNT
SDTTQAEFLRELNLIASDPDSEHMYLIDDFNTLPALESKLVSQFCEDENGALVLNRNTNG
FGRNGNNGYGNNGQGNNGQGNNGHENSGHGNNGQGNNGHGNNGHGNNGQGNSGHGNNGQG
NNGQGNNEHGNTYNEDPILNPSGRTSSQSHIRGRGDNFVLPLNAGPLPVQVDDEEGEDLD
VRTYVRGGSTVAVANETVSIFPAKESSHSNTAVSSSGSASASSGTTGSASSSSEGQFQPV
SIPIPNSISPQESVSLNPRCNLSLDQGTCREYNIQWYYDKQANSCAQFWYGSCEGNANRF
ETEDVCKKTCVLSRTAG
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgttgttccctgctgtgacctggttcctgctggtagcagggctgttgagtgtctgggct
caggactactatgaagagagaacagtgaacaagagacccaggggcaggggggcccaactg
caagctccagccattgcaactaacgtgcaaaaacataatggacaagccattttagatgag
gactgcggtctggagcttacctttctgctggacagctctgagagtgccaaggagaaccat
gagcaggagaagcgctttgccatggatgtggtggacaggctccaggccgcccgcctgcag
accgggcgcagtctgagctggaaggcggccctgctgcagtacagcagtcacgtcatcatc
gagcagaccttcaagcagtggaagggcaccgacaacttcaagtcccacatcacccccatt
gtctacatcggccacggcacctacaccacctacgccatcaccaacatgaccaagatgtac
ctggaggagtccagcccaggcaacatcaaggtggccatgctgctcactgacggcatctcc
caccccaggaacccagacatcttctcagctgccgctgacgccaagaaccagggggtgaag
ttcttcacggtgggcatcacccgtgcagccaacgagtcagccaacgtggcccagctgagt
ttgttggccagttctcctgcctcccgatacctccacaacctgcaggatattgacattgtg
gagaaagtcctcaaagaaattactgacctggctgatgaagggtgtcccccggcccaacaa
tgtgcctgtgagaagggcgaaagaggactcagtggcttagccgggaagaagggtcgccct
ggagatgatggagcccctggtctcaaaggattgaagggagaaggaggactaagtggactt
ccaggtcgggatggcggagaaggaaaatctggttacaaaggagagaggggtgagagaggc
gagtgtggcactccaggaattaaaggggacaggggtcctgagggcccaatgggcaccaga
ggagtcagaggtctccagggtttacccggtccacagggtgacgttggacctgagggccct
cagggtaataagggtgatcggggtcaagctggcccggccggaattcagggagaaaatggt
attggacttcctggaccaaagggtgatctgggattccagggaaaacccggcccccctggt
ccgacagggttgagtgaatatggccagccagggcctcaagggccacaaggttttcaaggg
gagaaaggaccccacggagaggggctccctgggccaaagggagaccgggggctggccgga
ccgagggggccaagaggacagacgggtgcaggaatcaaaggagaaaagggtgagttcggg
cctccaggtcatccaggacttgttggacttacaggagcaggcatccagggggagaaggga
gtggagggtcccagaggtccacctggaggcagaggacctcaaggagagggcttacctgga
cctaagggtgatcagggtttccccggagagctcggagctacaggggagagaggtgttggt
gtgccagggccaaagggtgagcttggtacatctggcctggctggcttacctggtcttcca
ggcgaggacggggctccaggacagaagggtgaggcgggtgtagctggtataagaggtcct
gatggagcagcagggatcggcacccagggcgagaagggagaccagggtcagaggggcatc
cgtggattacatggacctcctggcatgaccggaccctcaggggcaaagggggagcctggc
acaccaggccgactgggcatgccaggactaccgggacgggccattgcaggtcccaagggt
gatctaggcccacctggtccctctgggccgactggagagacaggctatgggctacctggg
ccaaagggtgaccgtggtcatcctggtccatcaggaccttttggatccaaaggtgaaggt
ttccctggtccagtgggtcctccaggccttccaggtctacagggagagcagggacctgag
ggcattggcatcccaggacctaagggagacattggcttcagaggattgccaggtttgcca
ggcccaaaaggaaagggtgtgcaaggaccaccgggtaacattggaaggaaaggaccccct
ggtccaaatgggccaccaggggaaggtctgcagggccccaagggtgagcaggggtctcag
ggtgtgacagggccaaggggacccataggggaaggattcccaggaggtaagggtgaccgt
ggcttgcagggtgagagaggaaataagggtgtaaaggggggcatgggagattctggggtt
cctggagagtctgggaggccaggagtaaagggtgaagtggggcttacaagagaagacatc
attaaattgatcaaggaaatatgtggatgtggaatcaagtgcaaggagaggccaatggag
cttgtattcgtcattgacagctcagagagcgttggtccggaaaactttgaaatcatcaag
gacttcgtcacagctctggtggaccgtaccactgttggacgtaacgccaccagaattgga
ttagtcctgtacagtctggatgtccacctggagttcaatctggcgcgctacatgaccaaa
caagatgtcaagcaggccatcaggaagatgtcctacgtgggtgagggaacctatactagc
accgccatccggaaggctacccaggaggccttctacagtgcccgtactggggttaggaaa
gtggccattgttatcacagatggacagacagacaaacgagagcctgtgaagctggacatt
gctgtgagggaggcccatgctgccaacattgagatgtatgcactggggattgtcaacacc
tcagatacaacccaggccgagttcctgcgtgaactaaatctgatcgcctctgaccctgac
agtgaacatatgtacctcatcgacgatttcaacactctaccagctctggagtcaaagctt
gttagccagttctgtgaggatgagaatggagcccttgtgttgaatcgcaacactaatggc
tttggaagaaatgggaacaacggctatgggaataacggacaggggaataacggacagggg
aataacggacatgagaatagcggacatgggaataacggacaggggaacaacggacatggg
aataacggacatgggaacaacggacaggggaatagcggacatgggaacaacggacagggg
aataacggacaggggaataacgaacatggaaacacctataatgaggatcctatcctaaat
ccaagtggacgcaccagttcccagagtcacatcagaggccgtggagataactttgttctg
cccctcaatgctggaccactcccagtgcaggtggatgatgaagagggtgaagatttagac
gtcaggacctacgtgcgaggaggtagtactgtggctgtagctaacgaaacagtatccatc
ttccctgcaaaggaaagctcccactccaacacagctgtctcatcatcaggatcagcatca
gcatcatcaggaacaacaggttcagcttcatcatccagcgagggccaatttcagcctgta
tcaattcctatccctaattctatttccccccaagagtccgtctcgctcaatccccgctgt
aacctgagtttggaccaaggcacctgtcgagagtacaacatccagtggtattacgacaaa
caggccaattcctgtgcccagttctggtatggaagctgtgaaggaaatgccaaccgcttt
gagacagaggatgtgtgtaagaagacctgtgttctatctagaacagctggttaa
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integrated database retrieval system
