Oncorhynchus gorbuscha (pink salmon): 124042960
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Entry
124042960 CDS
T07892
Symbol
gtf2f2b
Name
(RefSeq) general transcription factor IIF subunit 2b isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124042960 (gtf2f2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124042960 (gtf2f2b)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
124042960 (gtf2f2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
RPC5
fvmX6
Motif
Other DBs
NCBI-GeneID:
124042960
NCBI-ProteinID:
XP_046217067
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All DBs
Position
LG09:75360730..75394681
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AA seq
274 aa
AA seq
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MPLQLPQATSRVLKILIKGSAAMSEKTEVDLTGAKQNTGVWLVKVPKYLAQQWAKASGKG
EIGKLKIVKKQGKADVSFTLNEDLTSLSALGEKSVSVRAPRDHPFTMHSVGGQTLAVYTE
TSADKISLEGMVVQRAECRPAVNENYMKLKKLQIEVSTKPQRLTEQMDRAVTNNFKPVSN
HVNNVEYEKKKRAEGRMVRADRQQVMDMLFSAFEKHQYYNIKDLVEVTKQPVTYLKEILR
EIGVYNTKGTHKSTWELKPEYRHYQGGEEEIKDD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcccttacaactgccacaagcaacttcacgtgtcctgaagatcctcatcaaaggttct
gccgctatgtctgagaaaacagaggttgatttaaccggagctaagcaaaacaccggtgta
tggctagtaaaggttcccaagtacttggcccagcagtgggccaaagcatcgggaaaagga
gaaattggaaagctcaagattgtaaagaaacaaggaaaagcagatgtgtcgttcaccctg
aatgaggacctaaccagcctgtctgccctgggagagaagtccgtgtctgtacgagctccc
cgggaccacccattcaccatgcatagtgtgggggggcagaccctggctgtgtacactgaa
acctctgcagataagatcagtctggagggcatggtggtacagagagcggagtgcagacca
gccgtcaatgaaaactatatgaaactgaagaaattacagattgaggtgtctaccaagccc
cagcgtctgaccgagcagatggacagggctgtcactaacaacttcaagcctgtatccaac
catgttaataacgtggagtatgagaagaagaagagggctgaaggtaggatggtgagggca
gacagacagcaggtgatggacatgctcttctccgcctttgagaaacaccagtactacaac
atcaaagacctggtggaggtcaccaagcaacctgtgacctacttgaaggagatcctgagg
gagataggagtgtacaacactaaagggacgcacaagagtacatgggaactgaagccagag
taccgccactaccagggaggagaggaggagataaaggatgactag
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