Oncorhynchus gorbuscha (pink salmon): 124043017
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Entry
124043017 CDS
T07892
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124043017
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Protocadherins
124043017
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
124043017
NCBI-ProteinID:
XP_046217155
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All DBs
Position
LG09:complement(90622616..90626415)
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AA seq
980 aa
AA seq
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MMRGILTGWHRWIFGFITLEMLFVSLAESEGNTLKYQTNEEGSPGTVIGNLAKDMSLSRS
FSSKTNFRMMKQFNNSFIRVRETDGELTVGERIDRERICRHTLQCLITFDVVSFSKERYN
LIHVEVEVKDINDNSPEFPSKESTVEISENSDVGFRIPLDPAEDADVGSNYIQSYQISVN
SHFSIDVLLRADGVKYAELVLMKQLDRETQSSYVMQLIATDGGNPFNSGSTKITITVTDF
NDNRPVFDQNNFSVTLPEDAPVGFVLLDLNAVDPDEGLNGEVVYGFGKQVSAEIRALFEV
YSKSGRLTLKNPVDFETKKTYELDVQATDLGANPIPAICKIIINVKDVNDNAPEISITPM
TSIATGIAYISETADKDSLVALISTADRDSGVNSQVHCTLYGHDHFKLKQAYEDSYMIVT
AAALDREKISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPHFTKHVYEVSVVENNA
PGAYITTVEARDVDLGTNGKITYRLLDSVIMGSPVNTFVSLNAISGSIYALRSFNYEVMK
HLEVHIQASDGGSPQLQSSAIINLKIVDQNDNSPSIMEPVLNKGSAEVFLPKHAPAGYVV
TQIKAMDADEGINAQLSYNITEGGHLGFSINKVTGKLHVSCELNYDLSETLRVLVAVNDN
GTPSLTSTATIHLTLIEGTPPSVPVMVQNDSEEVFEWDMSIAIIIALAGSCSLLLLGIIL
ITTTCSRHKREKREAGCNDKVDIQHVEKGESSHIDSLITNHKSNAFDVHPFPEKALLASS
NTIKTAPGDSRQEQEYDFDNRIMESKLEGYSTLPGYRKETLRPITIWKGNSFTTISARDP
QFSGKDSGKGDSDFNDSDSDISGDGHKKDSPPINSLWACTSDCKILGHSDRCWSPSSSRP
NTSLSHGPHLSTFSKTASLPRNTLQRDTYYQQAHLPKTNGLQSVYEKVQHQEFDYILVCP
PTPARILETGEISLPEYGHS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtggcattttaacaggttggcatcgttggatttttggattcataacactagaa
atgttatttgtctccctggctgagtctgagggaaatactctgaaataccagaccaacgag
gagggaagtccaggaacagtgatcggaaacctggccaaggacatgtccttgagtcgctct
tttagctccaagactaattttagaatgatgaaacaattcaacaattcttttatcagggtg
agagaaaccgacggggagcttactgtcggggaaaggattgacagagagagaatctgcagg
cacactttacagtgtctcatcacttttgatgttgtcagtttttcaaaagagaggtacaat
ttgattcatgtcgaggtggaggtaaaagacattaatgataactctccggagtttccaagc
aaggaatctacagtggagatttctgaaaattctgatgtggggttccgtattcctttggac
ccagccgaggacgcagacgtcggatcaaactacatccaaagctatcaaatttctgtcaac
agtcatttttccattgatgtgcttttgagagcagatggggttaaatatgcggagttggtg
ctaatgaaacagttagacagggagactcagtcatcttatgtgatgcagcttattgccacc
gacgggggaaacccctttaactcgggttcaacaaaaataaccataacagtgacagacttc
aatgacaaccgtcctgtttttgaccagaataatttctcggtcactttgccggaggacgca
ccggttggattcgttttattggacttaaatgcagttgatccagatgagggtttaaacgga
gaggtggtctatggattcggaaaacaggtttctgccgagatccgagcacttttcgaagtg
tacagtaaatccgggcgcctaacgctcaagaacccagtggattttgagaccaagaaaaca
tatgagttagacgtgcaggcgactgatcttggagccaacccgatccccgctatctgtaaa
ataataattaatgtcaaagacgttaatgacaatgccccagaaataagtattacgccaatg
acctccatcgcaacaggcatcgcatatatcagcgagaccgcagacaaggacagcctagtg
gcgctgatcagcaccgcggacagggactcgggcgttaacagccaggtccattgcacctta
tatgggcacgaccatttcaaacttaaacaggcatatgaggacagctacatgattgtcacc
gcagcagccctggacagggagaagataagcgagtataatttaactgtgatggctgaagat
ttcgggtcacctccattgagaaagatcacacaatacaccataaggctaagcgacgagaat
gacaacgccccacactttactaaacatgtctatgaagtttctgtcgtagaaaataatgca
ccaggggcatatattacaactgttgaggccagagatgtagacttgggaactaatggcaaa
attacatacagactattagacagtgttataatgggatcacctgtcaacacgtttgtatct
ctaaatgcaatctctggttcaatatatgcactgagaagcttcaactatgaagtcatgaaa
catctagaggtacacatccaggcgagtgatgggggctcaccccagcttcagagcagtgct
atcatcaatctaaaaatagttgatcagaatgacaactctccgtccatcatggagcccgtc
cttaataagggatctgctgaggttttcctgcccaaacatgcacctgcaggttatgttgtc
acccagataaaggccatggatgctgatgaaggcataaacgcgcagttgtcttacaatatc
acagagggaggacacttgggtttctccattaacaaggttactgggaagttacacgtgagt
tgtgagctgaactacgacctgtccgaaacactgagagtcctcgtggctgtcaacgacaat
ggaacaccttctctgacctccacggccactatacacctcactctcatcgaaggcacccct
cccagtgttcctgttatggtccaaaatgacagcgaggaagtctttgaatgggacatgtcc
attgccattatcattgccttagcagggagctgctccctcctcttgctaggcatcatcctg
atcactaccacctgcagtcgacacaaacgggagaagagagaggcgggatgcaatgacaaa
gtagacatacaacatgtggagaagggagagagcagccatattgattcattgatcaccaac
cacaaaagcaatgcgtttgatgtacacccttttcctgagaaagcactgttggcctccagc
aacacaataaaaacagccccaggtgatagcagacaagaacaagagtatgactttgacaac
aggataatggagagtaaattagagggttattcaacactgcccggctataggaaagaaacc
ctccgacccataaccatatggaagggcaactcattcacaaccatctcagccagagatcct
cagttcagtgggaaggacagtgggaaaggagacagtgactttaatgacagtgactctgac
atcagtggggatggacacaaaaaagactccccaccgataaacagtctctgggcctgcacc
agtgactgtaaaatcctaggccactcagaccgatgctggagcccctcatcctctagaccc
aacaccagcctctcccacggaccacacctctcaaccttctccaagacagcctcgttgcca
cggaacaccctgcaaagagacacctactaccagcaggctcacctacccaagaccaacggt
ctgcaaagcgtctatgaaaaagtccagcaccaagaatttgattatattctggtttgtcca
ccaacaccagccaggatactagaaactggtgagatatccctcccggagtatggacactct
taa
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