Oncorhynchus gorbuscha (pink salmon): 124043112
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Entry
124043112 CDS
T07892
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04145
Phagosome
ogo04814
Motor proteins
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124043112
09142 Cell motility
04814 Motor proteins
124043112
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124043112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124043112
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124043112
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
124043112
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
124043112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Dynein_IC2
Beta-prop_EML
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_WDR11_1st
Beta-prop_DCAF4
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
124043112
NCBI-ProteinID:
XP_046217252
LinkDB
All DBs
Position
LG01:78602077..78623990
Genome browser
AA seq
631 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEDERKKKEADLKKDAAPLDDSDLEKKRRETDA
LLQSMGITSADVPVVPPPMSPTSKSVGTPSEAGSQDSGDGAVGSRTLHWDSDPSTLQLHS
DSELGRGPLKLGMAKITHVDFPPKETVSYTKETQTPVTTQQKEEEDEEEEEEEIAPPQPV
LEIQMEKPDQKEEEEAPPQELTEEEKLQILHSSEFITFFDHSTRIVERALSQHVDVFFDY
SGREMEEKEGEIQAGAKLFLNRQFVDERWSKHRVVTCLDWSPQYPELLVASYNNNEEAPH
EPDGVALVWNMKYKKNTPEYVFHCQSAVMSAAFARFHPNLVVGGTYSGQIVLWDNRSNKR
TPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSLELVFK
QSKAVAVTSMSFPLGDVNNFAVGSEDGSVYMACRHGSKAGISEMFEGHHGPITGIDCHTA
TGPVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVG
HLDLWNLNNDTEVPTASTTVEGNPALNRVRWAHSGKEIAVGDSDGQILVYDVGEQIAVPR
NDEWTRFVRTLAEINENRDDAEELAAQRLSA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagcgagctgaaagcggagcttgaacggaagaagcaacgccttgctcag
atcagggaggagaaaaaaaggaaggaagatgagcgcaaaaagaaagaggctgacctgaag
aaagatgccgccccactggatgactcggatttggagaaaaagagacgtgagacagatgcc
cttctgcagagcatgggcatcacatcagctgatgtccctgttgtccctcctcccatgtcc
ccgacctccaaatctgtgggcacaccaagcgaggcagggagccaagactcgggcgacggg
gccgtgggatccaggactctacactgggactctgacccgtctactcttcagcttcactct
gactccgagctggggcgtggacctctgaagctgggcatggccaagatcacccatgttgac
ttccctccaaaagagacggtgtcgtacaccaaggagacccagacgcctgtgacgacccag
cagaaagaagaggaagacgaggaggaggaggaggaggagatcgctccaccacaaccagtg
cttgagatccaaatggagaaaccagaccagaaagaggaggaggaagcacctccacaagag
ctgactgaggaggagaagctgcagatcctccactcctcagagttcataaccttctttgac
cacagcacccgcatcgtggagagggccctgtcccaacacgtggacgtcttcttcgactac
agtggccgggagatggaggagaaggaaggtgagatccaagctggggccaagctgtttctg
aacagacagtttgtggacgagcgctggtctaagcatcgcgtggtcacctgtctggactgg
tcccctcagtatcctgagctgctggttgcctcatacaacaacaacgaggaagccccccac
gagccggacggggtggccctggtctggaacatgaagtacaagaagaacacgccggaatac
gtcttccactgccagtctgcagtgatgtcggctgcctttgccaggttccaccctaacctg
gtggtggggggcacctactcggggcagatcgttctgtgggacaacaggagcaacaagagg
acccccgtgcagaggacccctctgtcagcagcagctcacacgcacccagtgtactgtgtg
aacgtggtgggcacccagaatgcccacaacctcattagcatctctaccgacggcaagatg
tgttcctggagcctggacatgctgtctcaaccgcaggacagcctggagctggtgttcaag
cagtcgaaagccgtcgctgtcacctccatgtctttccccctcggagatgtcaacaacttt
gcggtggggagcgaggacgggtccgtctacatggcgtgtcgccatggaagtaaagcaggg
atcagtgagatgtttgagggccaccacgggcctatcacagggatagactgtcacacagcg
accgggcccgtcgacttctcccacctgtttgtcacctcctcctttgactggaccgtcaag
ctgtggagcaccaagaacaacaagccactgtactcgttcgaggacaactctgattacgtc
tatgacgtcatgtggtcccccactcacccggctctgtttgcgtgtgtggatggagtgggc
catcttgatctgtggaacctcaacaacgacacagaggttcctacagccagtacgacagtg
gaggggaacccagccctgaaccgcgtgcgctgggcccactctggcaaagagatagccgtg
ggagactctgatggacagatcctggtctatgatgttggagagcaaatcgctgttccacgc
aacgacgagtggacccgttttgtccgaaccctggcggagatcaacgagaaccgggatgac
gccgaggagcttgccgctcagcgcctctctgcttga
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