Oncorhynchus gorbuscha (pink salmon): 124043155
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Entry
124043155 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 4-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124043155
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124043155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124043155
Spliceosome [BR:
ogo03041
]
Common components
Common spliceosomal components
SR proteins
124043155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124043155
NCBI-ProteinID:
XP_046217361
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All DBs
Position
LG09:complement(10404457..10411668)
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AA seq
375 aa
AA seq
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MSRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDL
CGERVIVEHTKGPRRDGSYGSGGGGGGGDRYGPPARTDYRLIVENLSSRCSWQDLKDYMR
QAGEVTYADTNKGRRNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLIEDRPGAKRSKRS
YSRSRSRSRSRSRSRRSRKSRSDSSSRSRSRGAGSRSRSRSHSKKDKTKGSRDEERTNGA
HKAKEGRGARSKSRSRSRSKSKKSSKKEVKKSRKDESRSRSRSRSAAKDRSRKSGSKSRE
PAKSDDEGATAXRRGAARSRSRSHTPAESKPKSKSKSPSPSPAKAHSRSPSVSRSESRSK
SRSASRSRSRSLSES
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagtttacattggaagattgagctatcgagcgagagaaaaggacgtggagaag
ttcttcaaaggctatgggaagatacttgaagttgacctgaaaaacgggtatggctttgtt
gaatttgatgacccccgcgatgcagatgatgctgtgtatgacctgaatgggaaggacctg
tgtggggagagggttattgtggaacacacaaaggggccgcggcgggacggcagctacggc
tcaggaggaggaggaggaggaggtgaccgatatggcccaccggcaaggacagactatcgg
ctgatcgtcgagaacctgtccagtcgctgcagctggcaggacctgaaggactacatgagg
caggcgggtgaggtgacgtatgctgacaccaataaggggcgcaggaacgagggagtgata
gagttcaggctgtactctgacatgaagagagccctggagaagctggacggcacagaggtg
aacggcaggaagatccggctgattgaggaccgccccggggccaagcgcagcaaacgctct
tactctcgcagtcgtagccgctcccggtctcgctccaggagccgtaggtcccgtaagagc
cgcagtgacagcagcagtcgctcccgctccaggggtgctggctcccgctcccgtagccgc
tcccacagcaagaaggacaagaccaagggcagcagagatgaggagcgcaccaacggtgcc
cacaaggccaaggaggggcgcggggcccgcagcaagagccgcagcaggagccgcagcaag
agcaaaaagagcagcaagaaagaagtgaagaagagcaggaaggatgagtctagatccagg
tcccgctccagatcagcagctaaggatcgctcccggaagtcgggttcaaagagccgcgag
ccggccaagagcgacgacgagggagctacagctnngagaaggggggccgcccgttcccgc
tctcgctcccacacccctgccgaatccaaacccaagtcaaagtccaaatctccatctccc
tccccggccaaagcccactcccgttccccctccgtctcccgctcagagtcccgctccaaa
tctcgctccgcgtctcgttctcgctcccgctctctatcagagtcctga
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