Oncorhynchus gorbuscha (pink salmon): 124043159
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Entry
124043159 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: pumilio homolog 1-like
KO
K17943
pumilio RNA-binding family
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Kinetochor_Ybp2
Motif
Other DBs
NCBI-GeneID:
124043159
NCBI-ProteinID:
XP_046217366
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Position
LG09:complement(11064801..11121853)
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AA seq
1137 aa
AA seq
DB search
MSSVCVLKGKAVLWQASFSPHLRTSTPSMPVVLSSGGHAPQPDXTPHAPPPSQQGVVGTG
RSQDDAMVNYFFQRQHGEQPGKHRWPTGENIHDSQGRSMDELNHDFHALALEGRAMGEQL
LTGKKFWESDEAPKGIFLDQWRGGAWGATDHLVSQPIMVSHRPGGSFHGGGEVGGSVMSP
RSESGGLGVSMVEYVLSSSPAEKLDSCLRKGPFGARDGEVGEEIREKPKASFEGEKLKEM
GVGDVISDVINPNGLPVQNGLDVDGKEYSRQGQMLPAGPDTGLIGGVGGEGMVSMGGGGG
PKPQEVFSGVEQGVTMDTMQSVMEPLQFGYNSQMTMDSQPTMGLFDYSNQQQVFQRPSAL
AAQQQQYALAAAQQSHIGLAQAFVSNPYIISTGPSGTDPYAAGLAAAATLGPTVMPPQYY
GVTPWGVYPANLFQQQAAAANNSANQQAQGQNQHNQQQVSDAWGGNQRPLTPSQGQQGQQ
NDQLIAAAAVNSALAFGQGLAAGVPGYPMLAPAAYYDQTGALVVNTGSRGGPVRLMAPAG
SVIISPSAAQAVAAAAAGGGTNGGMGGGANGPFRAMQSQQPQQQGGGAMSGNSFYGSSLS
NSSQSSSLFSQGSAQPGPGSASLGFGQSNSSLGATLGGFGTAVANSSGGSSSRRDSLTGT
SDLYKRTQSSLTPIGHGGFYNGTLGFSSSPGPVGMPLPNQGPSHSLTPPPSLSNHSSSSN
LNLGGLTNGSGRFISAAPGAEAKYRSASSGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSR
LLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQ
LMVHVFGNYVIQKFFEFGSVDQKLAVAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQV
ISEMVWELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRV
MQRILEHCLPDQTLSILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNV
LGLSQHKFASNVVEKCVSHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMI
DVAEPTQRKIIMHKIRPHVSTLRKYTYGKHILAKLEKYYMKNGVDLGPLCGPPNGIM
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgtgtgtgtgttgaagggtaaagcagtgctctggcaggcctcgttcagcccc
cacctcagaacttcaactcccagcatgccggtggtgctgagcagcggaggacacgccccc
cagccggacntgaccccacatgccccgccaccaagccagcagggcgtggtgggtacgggg
cgctctcaggatgatgccatggtgaactacttcttccagcgccagcacggagagcagcct
ggcaaacaccgctggcccaccggggagaacatccacgacagccaggggcggtcaatggat
gagctgaaccatgacttccatgctctggctctagaggggcgtgccatgggagagcagctt
ttgacaggtaagaagttttgggagagtgacgaagccccaaaagggatcttcctggaccag
tggaggggcggtgcatggggggccacagaccacttggtgtctcagccaatcatggtgtct
catcggccgggtgggagtttccatggcggtggggaggtgggcgggtcagtgatgtcaccg
cggtcagagagcgggggcttaggagtcagtatggtagaatacgtcctctcctcttctccc
gccgagaaactggactcctgcctccgtaagggacctttcggtgcgagggatggagaggtg
ggggaggagattagggagaaaccaaaggcctcatttgaaggagagaaactcaaggagatg
ggagtgggtgacgtcatcagtgatgtcatcaaccccaacgggctccctgtgcagaacggc
ctggacgtggatggcaaggagtacagtcgtcaaggtcagatgctgcccgcagggccagac
actggcctaatagggggtgtaggaggggagggtatggtctccatgggaggtggtggtggt
cccaaaccccaagaggtcttctctggggtggaacagggtgttaccatggataccatgcag
tctgtgatggagccgctgcagtttggctacaactcccagatgaccatggactctcagccc
accatgggtctgttcgactacagcaaccaacaacaggtgttccagagacccagtgctcta
gcagcccaacagcagcagtatgccttggcagcagcacagcaatctcacattggtttggct
caagcgtttgtttccaacccttacatcatcagtaccggtccgtctggaaccgacccctac
gctgctggactggcggctgctgcaacactgggcccaacggtgatgcctcctcagtactac
ggggtgactccctggggagtgtatccagccaatctgttccagcaacaggctgcggccgcc
aacaactcagccaatcaacaggctcaaggacagaaccagcacaaccaacaacaggtcagt
gatgcgtggggaggtaaccagcgacccctgacccctagccaaggtcaacagggtcagcag
aacgaccagctgatcgccgccgcagcagtcaactcggctctcgccttcggacaggggctg
gctgccggcgtgcctggctatcccatgctggctccagctgcttactatgaccagacgggg
gcgctagtggtcaacacaggatctaggggcggacccgtacgcctcatggcccccgcaggc
tcagttattatctctccctccgctgcacaagcagtggcggcagcagctgcaggtggcggg
actaacggtggtatgggaggcggggccaatggtccgttccgagccatgcaatcacagcag
cctcagcagcaggggggaggggctatgtcaggaaactccttttatggatcctctcttagc
aactcatcccagagctcctccctcttctctcaaggctccgcccagccgggccccggctcc
gcctctctggggtttggtcagagcaactcttcactcggagcgacgttgggcggctttggc
actgcagtggctaactccagcggtggcagcagttctcgtcgtgactctctgactggcact
agtgacttgtacaaacgcacgcaatccagcctcactcccatcggccacggggggttctac
aacggaaccctgggctttagctcctcccccgggccagttggaatgcctctgcccaaccaa
ggcccctcccactccctaactccacccccttctctgtccaatcacagctcctcatccaac
cttaacctgggaggtctgaccaatggcagcggtcgtttcatatctgctgccccgggggcg
gaggcgaagtatcgcagcgccagttctggctcctccctcttctctcccagcagccagctc
ttcccgtcgtcacggctacgttacggaatgtcggacgtgatgccgtcagggcggagccgg
cttctggaagacttccggaacaaccgctaccccaacctgcagctgagagagattgctggg
cacatcatggagttcagtcaggaccaacacggcagcaggttcatccagttgaagttggag
agggccagctcagcggagcgtcagctggtgttcagtgagatcctccaggctgcctaccaa
ctcatggtccacgtctttggaaactacgtcatccagaagttctttgagtttggcagtgtg
gaccagaagctggctgtagccgagaggatcaggggtcatgtcctgtctctggcccttcag
atgtatggctgtagagtcatacagaaggcgctggagttcatcccctcagaccaacaagtt
ataagtgagatggtatgggagttggacggtcacgtgttgaagtgtgtgaaggatcagaac
ggcaaccacgtggtgcagaagtgtatcgagtgtgttcagccccacgcgttacatttcatc
atcgacgccttcaagggacaggtgtttgccctctccacccacccctacggctgtagagtg
atgcagcgtattctagaacactgtcttccagaccagaccctgtccattctggaggagctg
caccaacacacggaacaactggtgcaggaccagtatggtaactatgtgatccagcatgtg
ctagaacacggcagagcggaggacaagagtaagatcgtagctgagatcagaggaaacgta
ctggggctcagccaacacaagtttgccagtaatgtagtggagaagtgtgtgagccatgcg
tcgcgtgcagagcgggctgtgttgatagacgaggtgtgtagcctgacggaggggccccac
agtgccttgtacaccatgatgaaggaccagtatgccaattacgtggtgcagaaaatgatt
gacgtggccgaacccacacagagaaagatcatcatgcacaagatccggccccacgtctcc
actctgaggaagtatacatatggaaaacacatcctggccaagctggagaaatactacatg
aagaatggagtggacctgggccctctctgtggccctcccaacggcatcatgtaa
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