Oncorhynchus gorbuscha (pink salmon): 124043165
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Entry
124043165 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 2-like
KO
K16578
CLIP-associating protein 1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124043165
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124043165
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124043165
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124043165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
Cnd1
ParcG
Arm
TAN
IFRD
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
124043165
NCBI-ProteinID:
XP_046217379
LinkDB
All DBs
Position
LG09:complement(11417452..11554207)
Genome browser
AA seq
1525 aa
AA seq
DB search
MEEHDNMDYLYQQVLQKDVTRRLQVGQDLIDYLNDPQRSSDVEQDKPRLDKTIDELTGWV
NASNYKVALLGIDIAGAFVDRLGEHFRGYLGTVVPALVDRLGDSKDQVREQSQNLILRCM
EVTASPMYVWERLLPGFKHKNFRSREGVCLVLCATLNTFGAQPLRLSKIVPHLCTLTGDQ
NPQVREAATTSLVDVYRHIGERVRADLGKSGLPAARLQTIYGRFDEALNSENMALSPSHD
RSFEDDADSADGNRAQAAFKVPKVPKKSAESSAARRPNTTASKIGGASKDGTGGIDEEDF
IKSFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDWDQRAAAMKKIRSLIVAGATEYECF
YQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEGILPILFNLIPNCA
KVMATSGASAIRFIIRHTHVPRLIPLITSNCTCKSVAVRRKCFDFLDLLLQEWQTQTLER
HTAVMVASIKKGISDADAEARVEARKAYWGLRNHFPGEADSLFNSLEPSYQKSLQSSLKS
SGSVTSLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPAGHKGGVSPGSLQRSRSDVDVNA
ATVAKQRHIGQVGPVRLTPGSHSSLDDASDKTDGRLRTKQPLTTATSVSHVDSRGRSRTK
MVSQSQRSYESDCTPAGSRSGSPGRVLTSTALSTLGSGAQRVLAGSGGRRSRIPRSQGCS
RDSSPTRLSVAPSSVSSIYKATSRGARGSRIPRPSMSQGCSREASRESSRDTSPVRSFTP
LASRHYSRSTGALHTADALGAAGAGYSIGQSSHLSSSVSTMRVLTGSDIEEALADALLLG
DITSKKKPARRRYENYGMYSDDDANSDASSACSDRSYSSRNGGVIPTYMRQTEDVAEVLN
RCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTRMFADPHSKRESGSKVYGTA
ESGISSASFKRVFSMFLETLVDFVLVHREDLQDWLFILLTQLLKKMGADLLGSVQAKVQR
ALDITRESFPNDLQFTILMRFTVDQTQTPNLKVKVAVLKYIETLTLQMEPQDFVNSSETR
LAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAALPKTFQDGATKLLQNHL
RNTGNTAQAPRGSPMTRHTPPPSPASWSSPLTSPINTSQNTSTLGAFDYDTENMNSDDIY
SSLRGVTEAIQNFSVRSQEDMNETGGGADQVDGVRTALDNKTSLLNTPLLSSSPRGSRDP
FTDSPFKHNVKDTSLDESDQQTDDSSIDQSELVTELLKELSNHNERVEERKVALCDLLKL
IRENTLQVCWDEHFKTILLLLLETLGDREHVIRALALRVLREILSRQPWRFKNYAELTIM
KALEAHRDPHKEVARAAEETAAMLASSISPDQCVKVLSPIIQSADYPINLAAIKMQTRVI
ERVPHHGLVTMLPEIVPGLIQGYDNAESSVRKACVFCLVALYAVIGEELKPHLNQLSGSK
LKLLNLYIKRAQSGSSGGEPPPDSL
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggactacttatatcagcaggtcctgcagaaagacgttacc
cgcaggttgcaggtcgggcaggatttaatagactacctgaacgacccgcagaggtcctcc
gatgtggaacaagacaaaccccggctggataaaaccatagatgagctgacgggatgggtc
aacgccagcaactacaaggtggcgttgttggggatagacattgccggggcgttcgtcgat
cgcctgggggaacactttagaggatacctgggaacagtggtcccagccctcgtggacagg
ttgggcgacagtaaggaccaggtcagagaacagagtcagaatcttatcctccgctgtatg
gaagtgaccgcgtcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aacttccgcagcagagagggggtgtgtctggttctctgcgccacgctcaacacgtttggt
gctcagccgttgcgtctcagtaagatcgttccccacctctgcactctgactggagaccag
aacccacaggtccgtgaggctgccacaacatctctagtggatgtgtatcgccacataggg
gagagagtcagagccgacctgggaaagagtggcctgcctgccgcacggttacagacaata
tatgggcgttttgacgaagctttgaattctgagaacatggcgctcagccccagtcacgac
cgtagttttgaggatgatgcagacagtgcagatgggaaccgtgctcaggctgccttcaag
gtccccaaggtccccaagaagtcggcagagtcctctgctgcacgaagacccaacacgacg
gcttccaagatcggaggtgcgtctaaggatggaaccgggggcatcgatgaagaagacttc
atcaaatctttcactgacgtccccacagtacagatctactcatctcgtgacctggaggat
aacctgaataagatcagagagatctgttctgatgataaacatgactgggaccagagagcc
gctgcaatgaagaagatccgctcgctgattgttgccggggcaacggagtacgagtgtttc
taccaacacctgaggctgttggacggagcgttcaaactgtcagctaaagacctccgatca
caggtggtacgagaggcctgcatcactgtggctcacctgtcgacagtgttgggtaataag
tttgaccatggtgctgagggcattcttcctatcctgttcaacctcatccctaactgtgcc
aaggttatggccacttcaggggcgtctgctatacgcttcatcatacggcacacacacgtt
cccagactcatccccctgatcaccagtaactgcacctgcaagtctgtggccgtcagacgg
aaatgttttgacttcttggacctgcttctacaggagtggcagacccagactctggagaga
catacagctgtgatggtcgccagcattaagaagggaatctcagatgccgacgcagaggct
agggtagaggcccgcaaggcatactggggtcttaggaaccatttcccgggggaggcagac
tctctgttcaactcgttagaaccgtcctatcagaagagcctccaatcgtctctcaagagt
tctgggagcgtgacgtctcttcctcagagcgaccgctcctcttcctcatcacaggagagc
cttaatcgtcctctgtcatctaaatggtcagctgctcctggaagagtcccggcgggtcat
aagggcggggtgtcgccgggctccctacaacgttcccgtagcgatgtagatgttaatgcg
gcaacggttgctaagcagcggcacatcgggcaggtggggccagtgagactgacccccggc
tcccactcctcattggatgatgcctcagataaaacagatggtcgtctgaggaccaagcag
cctctcaccacggcaaccagtgtcagccacgtggactcccggggacgcagccgcaccaag
atggtgtcccagtcacaacgttcctacgaatcagattgcacaccagccggcagtcggagt
ggttccccgggtcgcgtcctgaccagcaccgctctgagtacgctgggttctggagcccag
agggttctagctgggtccggagggagacgtagccgcatcccccgcagccagggctgctca
cgagactcctcccctacacgcctgtctgtcgctccctccagtgttagttccatctacaaa
gcaacgagcagaggagctcgaggcagtcgtattcctcggcccagtatgagtcagggctgc
agtagggaggccagcagagagagcagcagagacaccagccctgtgcgttcctttacacct
ctggcatcgcgccactactctcgctccaccggagctctccacaccgccgacgctttaggg
gccgcaggggcagggtacagtatcggtcaatccagccatctgtcatcgtcagtcagcacc
atgagagtcctcactgggtctgatatagaggaggccctcgctgacgccctgctgttggga
gacataacatccaagaagaagccagcgcggcgtcgctatgagaactatgggatgtattcg
gatgatgatgctaacagtgacgcgtccagcgcctgctcagaccgctcctacagctccagg
aacggaggagtcatccctacgtacatgagacagactgaagacgtggccgaggtgttgaac
cgctgtgccagtgccaactggtcagagaggaaggaggggcttctgggtctacaggctcta
ctgaagaatcaacgcaccctcagtcgtgtggagctgaagaggttgtgtgagattttcacc
aggatgtttgcagacccccacagtaagcgagaatccggatctaaggtctatggaacggca
gaatccggtataagctcagcctccttcaagagagtgttcagtatgttcttggagacccta
gtggactttgtcctggtgcacagagaagacctgcaggactggctgttcatcctgctcacc
cagctgctgaagaagatgggagctgacctgctggggtctgtccaggccaaggtccagaga
gcactggacatcacacgagagtctttccccaacgacctccagttcactatcctcatgagg
ttcactgtggaccagactcagacaccaaacctgaaggtgaaggtggctgttctgaagtac
attgagaccttgaccctgcagatggagcctcaggactttgtgaactccagtgagacgcgc
ctggctgtgtctcgcatcatcacctggaccacagagcccaagagctctgatgtcaggaag
gcggcccagtcggtactgatctccttgttccagttgaacactccagagttcaccatgctg
ctggcagccctgcccaagacattccaggatggggccaccaaactgctacagaaccacctg
aggaacaccggtaacactgcacaggccccaaggggaagccccatgacacgccacaccccc
cccccctctcctgccagctggtccagccccctcacctctcctatcaacacgtcacagaac
acatccacactcggtgcgtttgactacgacacagagaacatgaactcggacgacatctat
agtagtctgagaggtgttacagaggccattcagaacttctccgtccgcagtcaggaagac
atgaatgaaacgggtggtggtgctgaccaggtggatggagtccgcactgctctggacaac
aagacttctcttctgaacacccctctgctctcctcttctccccggggatcccgagacccc
tttacagactccccctttaaacacaacgttaaagatacttcattggacgaatcagaccag
caaactgatgacagcagcattgaccaatcagagctggtgactgagctgctgaaggagctg
tccaatcacaatgagcgtgtggaagagagaaaggtggcgctttgtgatctcttgaagctg
attcgagaaaacaccctgcaggtctgctgggacgaacacttcaaaaccatcctcctgtta
ctactggagacgctgggggacagagagcatgtgatcagggcgttagctctgcgtgttctg
agggagattctgagccgtcagccctggaggttcaagaactacgctgaactcaccatcatg
aaggccctggaggcacacagggacccacacaaagaggtggcgcgagcggcagaggagact
gcggccatgctggcgtcgtccatcagtccagaccagtgtgtcaaggtgttgtctcccatc
atccagtcagctgactaccccatcaacctggctgccatcaagatgcagaccagagtaata
gagagggtcccccaccacggactagtcaccatgctgccggagatagtccccggactcata
cagggttatgacaacgcggagagcagtgtgaggaaggcctgtgtattctgtctggtggcc
ctctatgcagtcataggggaggagctaaaacctcacctcaaccaactgtctggcagcaag
ttgaagttgttgaatctgtacatcaagcgtgcccagtcaggctccagtggtggtgagccc
ccaccagacagcctatag
DBGET
integrated database retrieval system
